DN618180

Overview
NameDN618180
Unique NameDN618180
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length573
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDA1_VIGUN (Phospholipase D alpha 1 OS=Vigna unguiculata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.675e-27
Identity = 57/122 (46.72%), Postives = 82/122 (67.21%), Query Frame = -3
Query:  209 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQ-LKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGS 571
            NQRS++G RD+EIAMG YQP H   ++ +   GQVYG+RMSLW EH+G + + F RPES  C+ +V  ++++ W  Y+++ + + L GHLL+YP+ V   G+V  LPG   FPD    ILG+
Sbjct:  679 NQRSMDGARDSEIAMGGYQPYHLANTQPAR--GQVYGFRMSLWYEHLGMLHDTFQRPESEECINKVNQIADKYWDLYSSESLERDLPGHLLRYPIGVASEGEVTELPGFEFFPDTKARILGA 798          
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDA2_ORYSJ (Phospholipase D alpha 2 OS=Oryza sativa subsp. japonica GN=PLD2 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.264e-26
Identity = 60/122 (49.18%), Postives = 80/122 (65.57%), Query Frame = -3
Query:  209 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVT-QLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGS 571
            NQRS++G RD+EIAMGA+QP H     L    GQ++G+RMSLW EH+G + + F  PESL CV+RV  ++++ W  YA+DE+   L GHLL YPV V   G V  LPG   FPD    ++G+
Sbjct:  687 NQRSMDGGRDSEIAMGAFQPCHLNTKGLV-ARGQIHGFRMSLWYEHLGMLHDNFLNPESLECVQRVNKMADKYWDLYASDELNDDLPGHLLTYPVRVTKEGTVTELPGAKFFPDTQAPVIGT 807          
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDA2_BRAOC (Phospholipase D alpha 2 OS=Brassica oleracea var. capitata GN=PLD2 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 1.651e-26
Identity = 57/122 (46.72%), Postives = 79/122 (64.75%), Query Frame = -3
Query:  209 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVT-QLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGS 571
            NQRS++G RD+EIAMG YQP H   S      GQV+G+RMSLW EH+G ++E F  P SL C+ +V  ++++ W  Y+++ +   L GHLL+YP+ VD  G +  LPG   FPD    ILG+
Sbjct:  682 NQRSMDGARDSEIAMGGYQPHHL--SHRQPARGQVHGFRMSLWYEHLGMLDETFLDPSSLECIEKVNRIADKYWDFYSSESLEHDLPGHLLRYPISVDNEGNITELPGFEFFPDSKARILGN 801          
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDA1_TOBAC (Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PLD1 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.157e-26
Identity = 55/122 (45.08%), Postives = 81/122 (66.39%), Query Frame = -3
Query:  209 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQ-LKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGS 571
            NQRS++G RD+EIAMGAYQP H    + +   GQ++G+RM+LW EH+G ++E F  PES  CV +V  ++++ W  Y+++ + + L GHLL+YP+ V   G V  LPG   FPD    +LG+
Sbjct:  678 NQRSMDGARDSEIAMGAYQPHHLATREPAR--GQIHGFRMALWYEHLGMLDETFLHPESEECVSKVNRMADKYWDLYSSESLERDLPGHLLRYPIGVASEGDVTELPGAEHFPDTKARVLGT 797          
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDA2_ARATH (Phospholipase D alpha 2 OS=Arabidopsis thaliana GN=PLDALPHA2 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 6.275e-26
Identity = 54/121 (44.63%), Postives = 78/121 (64.46%), Query Frame = -3
Query:  212 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVT-QLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILG 571
            NQRS++G RD+EIAMG YQP H   S      GQ++G+RMSLW EH+G ++E F  P S  C+++V  ++++ W  Y+++ +   L GHLL+YP+ +   G +  LPGC  FPD    ILG
Sbjct:  680 NQRSMDGARDSEIAMGGYQPYHL--STRQPARGQIHGFRMSLWYEHLGMLDETFLDPSSQECIQKVNRVADKYWDLYSSESLEHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILG 798          
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDA1_ARATH (Phospholipase D alpha 1 OS=Arabidopsis thaliana GN=PLDALPHA1 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 6.275e-26
Identity = 56/122 (45.90%), Postives = 78/122 (63.93%), Query Frame = -3
Query:  209 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVT-QLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGS 571
            NQRS++G RD+EIAMG YQP H   S      GQ++G+RMSLW EH+G ++E F  P SL C+ +V  +S++ W  Y+++ +   L GHLL+YP+ V   G +  LPG   FPD    ILG+
Sbjct:  680 NQRSMDGARDSEIAMGGYQPHHL--SHRQPARGQIHGFRMSLWYEHLGMLDETFLDPSSLECIEKVNRISDKYWDFYSSESLEHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGT 799          
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDA1_PIMBR (Phospholipase D alpha 1 OS=Pimpinella brachycarpa GN=PLD1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.398e-25
Identity = 53/122 (43.44%), Postives = 82/122 (67.21%), Query Frame = -3
Query:  209 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEV-TQLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGS 571
            NQRS++G +D+EIAMGAYQP H    + +   GQ++G+RMSLW EH+G +++    PES+ CV++V +++++ W  Y+++ +   L GHLL+YP+ V   G V  LPG   FPD    +LG+
Sbjct:  678 NQRSMDGAKDSEIAMGAYQPHHLATREPAR--GQIHGFRMSLWYEHLGMLDDTLALPESVDCVQKVNTVADKYWDLYSSETLENDLPGHLLRYPIAVASEGNVTELPGTEFFPDTKARVLGA 797          
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDZ1_ARATH (Phospholipase D zeta OS=Arabidopsis thaliana GN=PLDZETA PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.312e-25
Identity = 53/123 (43.09%), Postives = 74/123 (60.16%), Query Frame = -3
Query:  212 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQ---LKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILG 571
            NQRS++G RDTEIAMGAYQP H  ++    P GQ++ +R+SLW EH+      F  PES  C+R V + +++ W  Y+A E  +   L GHLL YP+ +   G+V  L G   FPD    ++G
Sbjct:  686 NQRSMDGGRDTEIAMGAYQPSHLLSTNNMRPVGQIFSFRISLWLEHLRVTTNAFQCPESEECIRMVNATADELWGLYSAQEYPRNDDLPGHLLSYPISIGSNGEVTNLAGTEFFPDTNAKVVG 808          
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDE1_ARATH (Phospholipase D epsilon OS=Arabidopsis thaliana GN=PLDEPSILON PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.077e-17
Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = -3
Query:  233 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIG----AIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQLKG-HLLKYPVDVDPTGKVNAL-PGCAQFPD 571
            NQRS++G RDTEIA+G YQ         +N   ++  YR+SLW EH G    A +   + PESL CVR +R++ EQ W+ Y+ D+V  + G HL+ YP+ V   G V  +  GC  FPD
Sbjct:  634 NQRSMDGCRDTEIAIGCYQTN-------TNNTNEIQAYRLSLWYEHTGGKITADDLSSSEPESLECVRGLRTIGEQMWEIYSGDKVVDMLGIHLVAYPISVTGDGAVEEVGDGC--FPD 743          
The following BLAST results are available for this feature:
BLAST of DN618180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PLDA1_VIGUN5.675e-2746.72Phospholipase D alpha 1 OS=Vigna unguiculata GN=PL... [more]
PLDA2_ORYSJ1.264e-2649.18Phospholipase D alpha 2 OS=Oryza sativa subsp. jap... [more]
PLDA2_BRAOC1.651e-2646.72Phospholipase D alpha 2 OS=Brassica oleracea var. ... [more]
PLDA1_TOBAC2.157e-2645.08Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PL... [more]
PLDA2_ARATH6.275e-2644.63Phospholipase D alpha 2 OS=Arabidopsis thaliana GN... [more]
PLDA1_ARATH6.275e-2645.90Phospholipase D alpha 1 OS=Arabidopsis thaliana GN... [more]
PLDA1_PIMBR1.398e-2543.44Phospholipase D alpha 1 OS=Pimpinella brachycarpa ... [more]
PLDZ1_ARATH5.312e-2543.09Phospholipase D zeta OS=Arabidopsis thaliana GN=PL... [more]
PLDE1_ARATH4.077e-1742.86Phospholipase D epsilon OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02D13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002D13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618180 ID=DN618180; Name=DN618180; organism=Citrus sinensis; type=EST; length=573bp
TTTTTTTTTTTTTTTTTGGATCGACATTGATCAAATTATTATTTTCCTTT
TCGAATGTTTATTAAATAACAAATGTATTTGATATTCATGGTCTGAAATT
TTCCGGAATATATCTTACAGTTGATGACATTTTGGCACAAAAATAACGAG
GCAATTTGGCACAAGCAAGATTCATTCAAATGGTGAGATTTTCTTGAATG
GCTATAAATGAACCCAATATGTTGCCACCCACATCTGGAAATTGTGCACA
TCCAGGAAGAGCGTTAACCTTGCCCGTTGGATCAACATCAACTGGATACT
TAAGCAGGTGACCCTTCAATTGTGTTACCTCATCGGCTGCATACTGTTTC
CAATTCTGTTCACTCAGTGACCTTACTCTTCTTACACATCCTAGACTCTC
CGGTCTGTTAAAACATTCCTCAATGGCTCCAATGTGCTCTGCCCATAATG
ACATTCTGTAACCATACACTTGCCCATAAGGATTGGAGAGTTTGCTCGCC
CAGGTGTGGCGTGGCTGATATGCCCCCATTGCTATTTCGGTGTCTCTGGT
GCCTTCCAGGGAACGTTGATTGA
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