DN618158

Overview
NameDN618158
Unique NameDN618158
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.062e-15
Identity = 37/60 (61.67%), Postives = 46/60 (76.67%), Query Frame = -3
Query:  315 EKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 494
            EK++GKYEKKVYVLPKHLDEKV           LT+L+K+Q+DY+S+  +GPYKP HYRY
Sbjct:  426 EKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKPPHYRY 485          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_WHEAT (Adenosylhomocysteinase OS=Triticum aestivum GN=SAHH PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13
Identity = 37/60 (61.67%), Postives = 43/60 (71.67%), Query Frame = -3
Query:  315 EKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 494
            EK++GKYEKKVYVLPKHLDEKV           LT+LTK Q+DYIS+  +GPYK   YRY
Sbjct:  426 EKASGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKSQSDYISIPIEGPYKLRLYRY 485          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_HALHL (Adenosylhomocysteinase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.134e-12
Identity = 36/56 (64.29%), Postives = 39/56 (69.64%), Query Frame = -3
Query:  315 GKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 482
            GKYEK VYVLPKHLDEKV           LTRL++EQA YI VS DGP+KP  YRY
Sbjct:  375 GKYEKDVYVLPKHLDEKVAALHLGRVGANLTRLSEEQAGYIGVSVDGPFKPEWYRY 430          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_PELCD (Adenosylhomocysteinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.640e-12
Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = -3
Query:  315 KSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 491
            +++ +YE KVYVLPK LDEKV           LTR+T++QADY+ V  DGPYKP HYRY
Sbjct:  417 QNSDRYENKVYVLPKQLDEKVARLHLANLGVKLTRMTEKQADYLGVPVDGPYKPEHYRY 475          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_XANOP (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=ahcY PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.108e-12
Identity = 33/54 (61.11%), Postives = 37/54 (68.52%), Query Frame = -3
Query:  315 YEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 476
            YEKKVY+LPKHLDE+V           LT LTK+QADY+ V   GPYKP HYRY
Sbjct:  427 YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_XANOM (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ahcY PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.108e-12
Identity = 33/54 (61.11%), Postives = 37/54 (68.52%), Query Frame = -3
Query:  315 YEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 476
            YEKKVY+LPKHLDE+V           LT LTK+QADY+ V   GPYKP HYRY
Sbjct:  427 YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_XANCP (Adenosylhomocysteinase OS=Xanthomonas campestris pv. campestris GN=ahcY PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.108e-12
Identity = 33/54 (61.11%), Postives = 37/54 (68.52%), Query Frame = -3
Query:  315 YEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 476
            YEKKVY+LPKHLDE+V           LT LTK+QADY+ V   GPYKP HYRY
Sbjct:  427 YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_XANC8 (Adenosylhomocysteinase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ahcY PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.108e-12
Identity = 33/54 (61.11%), Postives = 37/54 (68.52%), Query Frame = -3
Query:  315 YEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 476
            YEKKVY+LPKHLDE+V           LT LTK+QADY+ V   GPYKP HYRY
Sbjct:  427 YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_XANAC (Adenosylhomocysteinase OS=Xanthomonas axonopodis pv. citri GN=ahcY PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.108e-12
Identity = 33/54 (61.11%), Postives = 37/54 (68.52%), Query Frame = -3
Query:  315 YEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 476
            YEKKVY+LPKHLDE+V           LT LTK+QADY+ V   GPYKP HYRY
Sbjct:  427 YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_XANC5 (Adenosylhomocysteinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.059e-11
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = -3
Query:  315 YEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 476
            YEKKVY+LPKHLDE+V           LT LTK+QADY+ V  +GP+KP HYRY
Sbjct:  427 YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVPVEGPFKPDHYRY 480          
The following BLAST results are available for this feature:
BLAST of DN618158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
SAHH1_ARATH2.062e-1561.67Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH_WHEAT1.930e-1361.67Adenosylhomocysteinase OS=Triticum aestivum GN=SAH... [more]
SAHH_HALHL2.134e-1264.29Adenosylhomocysteinase OS=Halorhodospira halophila... [more]
SAHH_PELCD3.640e-1255.93Adenosylhomocysteinase OS=Pelobacter carbinolicus ... [more]
SAHH_XANOP8.108e-1261.11Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_XANOM8.108e-1261.11Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_XANCP8.108e-1261.11Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_XANC88.108e-1261.11Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_XANAC8.108e-1261.11Adenosylhomocysteinase OS=Xanthomonas axonopodis p... [more]
SAHH_XANC51.059e-1159.26Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02D01_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618158 ID=DN618158; Name=DN618158; organism=Citrus sinensis; type=EST; length=496bp
ATATTCCATTCAGTAAACAATAAAGGATAACAAGATGCAGCAAAGCAAGC
AAAACTTAAAACTGCACCAAATACAAAATAATCCAACACGGCCCCATCCA
AAACCTTATTCAAATCCCAAATGGTCTTCAATCAACGGAAACAAATCCGT
TTCTTTCCTCCAACTTTCCCACCACCCAAACACACACTACTACGAAATTT
AAACCTAACATCCTACTACAGATCATCATTGAAAACAATCAAGCCGGCCA
AATATTTTGTTTCTTTCCCTCAAAACATTCACTCTTCTTCTTCTTCTTCT
TCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTGTAAGGACCATCGGC
GGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAGCCTGGTGAGCTTAG
CTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTTTCATCGAGGTGCTTG
GGCAGAACGTACACCTTCTTCTCGTACTTGCCGGTGCTCTTCTCCT
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