DN618158

Overview
NameDN618158
Unique NameDN618158
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_PROM0 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ahcY PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11
Identity = 34/55 (61.82%), Postives = 38/55 (69.09%), Query Frame = -3
Query:  315 KYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 479
            +Y K+VYVLPKHLDE V           LT+LTKEQADYISVS +GPYK   YRY
Sbjct:  418 QYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKEQADYISVSVEGPYKSEFYRY 472          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_SYNSC (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9605) GN=ahcY PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = -3
Query:  315 KYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 479
            +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GPYKP HYRY
Sbjct:  422 EYAKEVYVLPKHLDEMVARLHLGRIGANLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_NOCFA (Adenosylhomocysteinase OS=Nocardia farcinica GN=ahcY PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = -3
Query:  315 KYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 479
            +Y+ +VY LPKHLDEKV           LT+LTK+QA+YI V  +GPYKP HYRY
Sbjct:  440 EYDNEVYRLPKHLDEKVARIHVEALGGTLTKLTKDQAEYIGVDVEGPYKPEHYRY 494          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTU (Adenosylhomocysteinase OS=Mycobacterium tuberculosis GN=ahcY PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = -3
Query:  315 KYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 479
            +Y+ +VY LPKHLDEKV           LT+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  441 EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTA (Adenosylhomocysteinase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ahcY PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = -3
Query:  315 KYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 479
            +Y+ +VY LPKHLDEKV           LT+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  441 EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBT (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=ahcY PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = -3
Query:  315 KYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 479
            +Y+ +VY LPKHLDEKV           LT+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  441 EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBP (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = -3
Query:  315 KYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 479
            +Y+ +VY LPKHLDEKV           LT+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  441 EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBO (Adenosylhomocysteinase OS=Mycobacterium bovis GN=ahcY PE=1 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = -3
Query:  315 KYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 479
            +Y+ +VY LPKHLDEKV           LT+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  441 EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_DESVM (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=ahcY PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 33/53 (62.26%), Postives = 36/53 (67.92%), Query Frame = -3
Query:  315 EKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 473
            E+KVY+LPK LDE+V           LT LTKEQADYI V  DGPYKP HYRY
Sbjct:  427 ERKVYILPKKLDEQVARLHLARLGVTLTTLTKEQADYIGVPVDGPYKPGHYRY 479          
BLAST of DN618158 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS9 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9902) GN=ahcY PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11
Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = -3
Query:  315 KYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 479
            +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GPYKP HYRY
Sbjct:  422 EYGKEVYVLPKHLDEMVARLHLSKIGANLTELSKDQADYINVPVEGPYKPDHYRY 476          
The following BLAST results are available for this feature:
BLAST of DN618158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
SAHH_PROM04.024e-1161.82Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_SYNSC5.256e-1158.18Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_NOCFA5.256e-1156.36Adenosylhomocysteinase OS=Nocardia farcinica GN=ah... [more]
SAHH_MYCTU5.256e-1156.36Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCTA5.256e-1156.36Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCBT5.256e-1156.36Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]
SAHH_MYCBP5.256e-1156.36Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]
SAHH_MYCBO5.256e-1156.36Adenosylhomocysteinase OS=Mycobacterium bovis GN=a... [more]
SAHH_DESVM5.256e-1162.26Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_SYNS96.864e-1158.18Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_02D01_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618158 ID=DN618158; Name=DN618158; organism=Citrus sinensis; type=EST; length=496bp
ATATTCCATTCAGTAAACAATAAAGGATAACAAGATGCAGCAAAGCAAGC
AAAACTTAAAACTGCACCAAATACAAAATAATCCAACACGGCCCCATCCA
AAACCTTATTCAAATCCCAAATGGTCTTCAATCAACGGAAACAAATCCGT
TTCTTTCCTCCAACTTTCCCACCACCCAAACACACACTACTACGAAATTT
AAACCTAACATCCTACTACAGATCATCATTGAAAACAATCAAGCCGGCCA
AATATTTTGTTTCTTTCCCTCAAAACATTCACTCTTCTTCTTCTTCTTCT
TCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTGTAAGGACCATCGGC
GGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAGCCTGGTGAGCTTAG
CTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTTTCATCGAGGTGCTTG
GGCAGAACGTACACCTTCTTCTCGTACTTGCCGGTGCTCTTCTCCT
back to top