DN618157

Overview
NameDN618157
Unique NameDN618157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.406e-39
Identity = 80/123 (65.04%), Postives = 94/123 (76.42%), Query Frame = 2
Query:  104 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDPLNNTLIAKVL 472
            DP  LQD CVA N   + VFVNGKFCKDPKL  A DFF+SGL  PGNT+NRLG   TD +V +IPGLNTLGI+  R+D+AP GQ PPHIHPRAS+I LVL+G L VGFV+S+  N TL +K+L
Sbjct:   26 DPNPLQDYCVATNGT-NRVFVNGKFCKDPKLVTANDFFYSGLNIPGNTSNRLGASVTDVDVRRIPGLNTLGIAIARLDFAPGGQLPPHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKIL 147          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL19_ARATH (Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 3.828e-37
Identity = 75/124 (60.48%), Postives = 86/124 (69.35%), Query Frame = 2
Query:  101 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDPLNNTLIAKVL 472
            +DP  LQD CV +N P DGVFVNGKFCKDPKL   EDFFF+GL +      + G + T  NV  +PGLNTLGIS  RIDY  YGQ PPH HPRASE+  V  GTL+VGFVTS+P  N L +K L
Sbjct:   23 SDPSSLQDFCVGVNTPADGVFVNGKFCKDPKLVTVEDFFFTGLHEARPPNPKTGSNVTAVNVNNLPGLNTLGISLVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTSNP-ENRLFSKTL 145          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 6.529e-37
Identity = 74/126 (58.73%), Postives = 86/126 (68.25%), Query Frame = 2
Query:  101 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDPLN--NTLIAKVL 472
            TDP  LQD CV +N P DG+FVNG FCKDP     +DF F GL  P NT N LG   T      +PGLNTLGIS  R+D+AP+G  PPH HPRA+E+F+VLEGT YVGFVTS+  +  N L AKVL
Sbjct:   23 TDPTQLQDFCVGVNKPNDGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVL 148          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.231e-35
Identity = 78/124 (62.90%), Postives = 85/124 (68.55%), Query Frame = 2
Query:  101 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDPLNNTLIAKVL 472
            +DP  LQD CVA  D    V VNG  CKDP     EDFFFSGL   GNT+NR G   T  NV QI GLNTLGIS  R+DYAPYG  PPHIHPRA+EI  +LEG+LYVGFVTS+P  N L  KVL
Sbjct:   22 SDPSQLQDFCVA--DKMSQVLVNGFACKDPAAITVEDFFFSGLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTILEGSLYVGFVTSNP-ENKLFTKVL 142          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL13_ARATH (Germin-like protein subfamily 1 member 3 OS=Arabidopsis thaliana GN=At3g04170 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 4.679e-35
Identity = 76/123 (61.79%), Postives = 90/123 (73.17%), Query Frame = 2
Query:  104 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDPLNNTLIAKVL 472
            DP  LQD CVA+ + K+GVFVNG+FCKDPKL  ++DFF SGL  PGNT  RLG     AN   IPGLNTLG+   RID+AP G  PPHIHPRASEI LV++G L VGFV+S+  N TL +K+L
Sbjct:   26 DPSPLQDYCVAVPE-KNGVFVNGEFCKDPKLVTSDDFFASGLNIPGNTNKRLGSFVNPAN---IPGLNTLGVGIARIDFAPGGLIPPHIHPRASEIILVIKGKLLVGFVSSNDYNYTLFSKIL 144          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 6.111e-35
Identity = 74/125 (59.20%), Postives = 88/125 (70.40%), Query Frame = 2
Query:  101 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDPLNNTLIAKVL 472
            +DP  LQD C+ +N P + +FVNGKFCKDPKL  A+DF+FSGL K   T ++ +G + T  NV QIPGLNTLGIS  RIDY   GQ PPH HPRA+EI LV EGTL+VGF +S P  N L  K L
Sbjct:   25 SDPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFP-ENRLFNKTL 148          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL15_ARATH (Germin-like protein subfamily 1 member 5 OS=Arabidopsis thaliana GN=At3g04190 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 7.981e-35
Identity = 72/123 (58.54%), Postives = 89/123 (72.36%), Query Frame = 2
Query:  104 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDPLNNTLIAKVL 472
            +P  LQD CVA N+  +GV+VNGKFCKDPK   A DF+ SGL  PGNT+   GV  T  +V+++PGLNTLG+   RID+AP G  PPH HPR SEIFLV++G L+VGFV+S+  N TL  KVL
Sbjct:   26 EPSPLQDYCVATNET-NGVYVNGKFCKDPKCVTANDFYTSGLNVPGNTSTGPGVKITVVDVKRMPGLNTLGVDIARIDFAPGGLYPPHTHPRGSEIFLVMKGKLFVGFVSSNEYNYTLFTKVL 147          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 2.322e-34
Identity = 74/124 (59.68%), Postives = 87/124 (70.16%), Query Frame = 2
Query:  101 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDPLNNTLIAKVL 472
            +DP  LQD CV+ N   +GVFVNGKFCKDPKL  A+DFFFSGL       + +G   T  NV  + GLNTLGIS  RIDYA  GQ PPH HPRA+EI +V +GTL VGFVTS+P +N L +KVL
Sbjct:   25 SDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGTLLVGFVTSNP-DNRLFSKVL 147          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 6.757e-34
Identity = 76/124 (61.29%), Postives = 86/124 (69.35%), Query Frame = 2
Query:  101 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDPLNNTLIAKVL 472
            +DP HLQD+CVA  D    V VNG  CKD +   AEDFFFSGL   GNT N+ G   T  NV Q+PGLNTLGIS  RIDYA +G  PPH HPRA+EI  VLEG+LYVGFVTS+P  N L  KV+
Sbjct:   29 SDPSHLQDLCVA--DKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGSAVTAVNVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTSNP-ENKLFTKVI 149          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL110_ARATH (Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 3.353e-33
Identity = 76/148 (51.35%), Postives = 89/148 (60.14%), Query Frame = 2
Query:   29 ITMKVIQVLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDPLNNTLIAKVL 472
            + MK +  L               +DP  LQD CV+ N   +GVFVNGKFCKDPKL  A+DFFF GL       + +G   T  NV  + GLNTLGIS  RIDYA  GQ PPH HPRA+EI +V  GTL VGFVTS+P +N L  KVL
Sbjct:    1 MAMKSLSFLAALSLLALTLPLTIASDPSQLQDFCVSANSSANGVFVNGKFCKDPKLVTADDFFFPGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVVELGTLLVGFVTSNP-DNRLFTKVL 147          
The following BLAST results are available for this feature:
BLAST of DN618157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GL12_ARATH1.406e-3965.04Putative germin-like protein subfamily 1 member 2 ... [more]
GL19_ARATH3.828e-3760.48Putative germin-like protein subfamily 1 member 9 ... [more]
GLP1_MESCR6.529e-3758.73Germin-like protein OS=Mesembryanthemum crystallin... [more]
GL21_ORYSJ1.231e-3562.90Putative germin-like protein 2-1 OS=Oryza sativa s... [more]
GL13_ARATH4.679e-3561.79Germin-like protein subfamily 1 member 3 OS=Arabid... [more]
GL112_ARATH6.111e-3559.20Putative germin-like protein subfamily 1 member 12... [more]
GL15_ARATH7.981e-3558.54Germin-like protein subfamily 1 member 5 OS=Arabid... [more]
GL111_ARATH2.322e-3459.68Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
GL23_ORYSJ6.757e-3461.29Putative germin-like protein 2-3 OS=Oryza sativa s... [more]
GL110_ARATH3.353e-3351.35Germin-like protein subfamily 1 member 10 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618157 ID=DN618157; Name=DN618157; organism=Citrus sinensis; type=EST; length=472bp
GTTTGAGATAGGCACATCCTGTGACTTAATCACCATGAAGGTAATTCAAG
TTCTTATAGGTTTTGCCCTCTTGGCTTTGGCTTCTTCTTTGGCCTCTGCC
ACTGACCCTGGCCATCTTCAAGATGTCTGTGTAGCCATCAATGACCCCAA
GGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGA
GAGCAGAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCTGGAAACACAGCA
AATCGACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAATTCCAGG
ACTCAACACCCTTGGCATATCAGCATTCCGTATTGACTATGCACCATATG
GCCAAAGGCCACCTCACATTCACCCCCGTGCCAGCGAAATCTTCTTAGTC
CTGGAAGGAACTCTTTATGTCGGTTTTGTGACATCAGACCCACTGAATAA
CACACTCATCGCAAAAGTTCTA
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