DN618157

Overview
NameDN618157
Unique NameDN618157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL23_ARATH (Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.750e-27
Identity = 64/112 (57.14%), Postives = 75/112 (66.96%), Query Frame = 2
Query:  104 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANR-LGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTS 436
            D   LQD CVA  D  +G+ VNG  CKDP     EDF+F GL     TAN  +G   T ANVE++PGLNTLG+S  RIDYAP G  PPH+HPRASE   VLEG L+VGF+T+
Sbjct:   23 DTNMLQDFCVA--DLSNGLKVNGYPCKDPAKVTPEDFYFIGLATAAATANSSMGSAVTGANVEKVPGLNTLGVSISRIDYAPGGLNPPHLHPRASEAIFVLEGRLFVGFLTT 132          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.690e-27
Identity = 63/112 (56.25%), Postives = 76/112 (67.86%), Query Frame = 2
Query:  104 DPGHLQDVCVA-INDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTS 436
            DP  LQDVCVA     K  + +NG  CK  +   A DFFF GL K GNT N +G   T A+VE +PGLNT+G+S  RIDYAP+G  PPH HPRA+EI  V+EG+L VGFVT+
Sbjct:   24 DPDMLQDVCVADYKSLKGPLRLNGFPCKRIENVTANDFFFDGLMKAGNTGNAVGSVVTAASVESLPGLNTMGVSMARIDYAPWGLNPPHTHPRATEIIFVVEGSLDVGFVTT 135          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.690e-27
Identity = 71/128 (55.47%), Postives = 82/128 (64.06%), Query Frame = 2
Query:  101 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDPLN--NTLIAKVL 472
            +DP  LQD CVA  D    V VNG  CKD K    +DFF +  L KP +T  ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLEGTLYVGFVTS+  N  N L  K L
Sbjct:   23 SDPSPLQDFCVA--DRNSPVHVNGFPCKDAKDVNVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTL 148          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.328e-26
Identity = 63/112 (56.25%), Postives = 74/112 (66.07%), Query Frame = 2
Query:  104 DPGHLQDVCVAINDPKDGVF-VNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTS 436
            DP  LQDVCVA      G   +NG  CK  +   A DFFF GL   GNT N +G   T A+VE++PGLNT+G+S  RIDYAP+G  PPH HPRA+EI  V EGTL VGFVT+
Sbjct:   24 DPDMLQDVCVADYKSLRGPLRLNGIPCKRLENVTANDFFFDGLTNAGNTTNAVGSLVTAASVERLPGLNTMGVSMARIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFVTT 135          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL121_ORYSJ (Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 3.040e-26
Identity = 70/127 (55.12%), Postives = 80/127 (62.99%), Query Frame = 2
Query:  104 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFF-SGLGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDPLN--NTLIAKVL 472
            DP  LQD CVA  D    V VNG  CKD K    +DFF  + L KP +T  ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EI  V EGTLYVGFVTS+  N  N L  K L
Sbjct:   24 DPSPLQDFCVA--DRNSPVRVNGFPCKDAKDVNVDDFFLEANLDKPMDTTKSKAGSNVTLINVMKLTGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVFEGTLYVGFVTSNQANGENKLFTKTL 148          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.970e-26
Identity = 69/128 (53.91%), Postives = 83/128 (64.84%), Query Frame = 2
Query:  101 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGN-TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDPLN--NTLIAKVL 472
            +DP  LQD+CVA  D    V VNG  CKD K    +DFF +  L KP + T ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EI  V+EG+LYVGFVTS+  N  N L  K L
Sbjct:   23 SDPSPLQDLCVA--DKNSPVRVNGFPCKDAKDVSVDDFFLAANLDKPMDITKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILSVIEGSLYVGFVTSNQANGENKLFTKTL 148          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 5.185e-26
Identity = 62/111 (55.86%), Postives = 73/111 (65.77%), Query Frame = 2
Query:  104 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTS 436
            DP  LQD+CVA  D    V VNG  CK       +DF+F GL   GNT N  G   T ANVE++PGLNTLG+S  RIDYAP G  PPH HPRA+E+  VL+GTL VGF+T+
Sbjct:   27 DPDLLQDICVA--DLTSAVKVNGFACK--AAVTEDDFYFKGLAAAGNTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDVGFITT 133          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL51_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0197200 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 8.845e-26
Identity = 71/129 (55.04%), Postives = 84/129 (65.12%), Query Frame = 2
Query:  104 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKP------GNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDPLNNTLIAKVL 472
            DP  LQD CVA  DP   V VNG  CKDP    A+DFFFSG+G+P      G TA+R     T  +V+ IPGLNTLG SA R+D AP G  PPH HPRASE  +VL G +Y GFVTS P ++ ++AKVL
Sbjct:   30 DPNPLQDFCVA--DPTSKVRVNGLPCKDPAAVTADDFFFSGVGEPAAGGGRGATASRR-YGFTARSVD-IPGLNTLGASAARVDVAPGGVFPPHYHPRASETAVVLAGAVYFGFVTSYP-DSRVVAKVL 153          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.155e-25
Identity = 67/129 (51.94%), Postives = 82/129 (63.57%), Query Frame = 2
Query:  104 DPGHLQDVCVAINDPKDGVF-VNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPY-GQRPPHIHPRASEIFLVLEGTLYVGFV--TSDPLNNTLIAKVL 472
            DP  LQD+CVA      G   VNG  CK      AEDFFF GLGKP +  + N +G   T A VE+IPGLNTLG+S  R+DYAP+ G  PPH HPRA+EI  V +G L VGFV  T+ P ++ LI +V+
Sbjct:   29 DPDMLQDICVADYKSLQGPLRVNGFPCKPEANVTAEDFFFPGLGKPADVYSGNPMGSAVTAATVERIPGLNTLGVSMARVDYAPWGGANPPHSHPRATEILFVADGLLEVGFVVATAAPASSRLITRVV 157          
BLAST of DN618157 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 1.155e-25
Identity = 69/128 (53.91%), Postives = 81/128 (63.28%), Query Frame = 2
Query:  101 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDPLN--NTLIAKVL 472
            +DP  LQD CVA  D    V VNG  CKD K    +DFF +  L KP +T  ++ G + T  NV ++ GLNTL IS  RIDYAP GQ PPH HPRA+EI  VLEG+LYVGFVTS+  N  N L  K L
Sbjct:   23 SDPSPLQDFCVA--DKHSPVRVNGLPCKDAKDVSVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTL 148          
The following BLAST results are available for this feature:
BLAST of DN618157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GL23_ARATH2.750e-2757.14Germin-like protein subfamily 2 member 3 OS=Arabid... [more]
GL13_ORYSJ4.690e-2756.25Germin-like protein 1-3 OS=Oryza sativa subsp. jap... [more]
GL122_ORYSJ4.690e-2755.47Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
GL32_ORYSJ2.328e-2656.25Putative germin-like protein 3-2 OS=Oryza sativa s... [more]
GL121_ORYSJ3.040e-2655.12Germin-like protein 12-1 OS=Oryza sativa subsp. ja... [more]
GL123_ORYSJ3.970e-2653.91Putative germin-like protein 12-3 OS=Oryza sativa ... [more]
GL52_ORYSJ5.185e-2655.86Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL51_ORYSJ8.845e-2655.04Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL14_ORYSJ1.155e-2551.94Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]
GL124_ORYSJ1.155e-2553.91Putative germin-like protein 12-4 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618157 ID=DN618157; Name=DN618157; organism=Citrus sinensis; type=EST; length=472bp
GTTTGAGATAGGCACATCCTGTGACTTAATCACCATGAAGGTAATTCAAG
TTCTTATAGGTTTTGCCCTCTTGGCTTTGGCTTCTTCTTTGGCCTCTGCC
ACTGACCCTGGCCATCTTCAAGATGTCTGTGTAGCCATCAATGACCCCAA
GGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGA
GAGCAGAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCTGGAAACACAGCA
AATCGACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAATTCCAGG
ACTCAACACCCTTGGCATATCAGCATTCCGTATTGACTATGCACCATATG
GCCAAAGGCCACCTCACATTCACCCCCGTGCCAGCGAAATCTTCTTAGTC
CTGGAAGGAACTCTTTATGTCGGTTTTGTGACATCAGACCCACTGAATAA
CACACTCATCGCAAAAGTTCTA
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