DN618156

Overview
NameDN618156
Unique NameDN618156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.654e-47
Identity = 94/141 (66.67%), Postives = 112/141 (79.43%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T  NV  + GLNTLGIS  RIDYA  GQ PPH HPRA+EI +V +GTL VGFVTS+  +N L +KVLN+GDVFVFP+GLIHFQ NIGK  A A++AL+SQ PG +TIA+TVFGANP+INP  L KAFQL+P++V DLQ KF
Sbjct:   82 TAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGTLLVGFVTSNP-DNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIANTVFGANPAINPTILAKAFQLNPRVVMDLQTKF 221          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL110_ARATH (Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.149e-46
Identity = 94/141 (66.67%), Postives = 110/141 (78.01%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T  NV  + GLNTLGIS  RIDYA  GQ PPH HPRA+EI +V  GTL VGFVTS+  +N L  KVLN+GDVFVFP+GLIHFQ NIGK  A A++AL+SQ PG +TIA TVFGANP+INP+ L KAFQ+DP++V DLQ KF
Sbjct:   82 TAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVVELGTLLVGFVTSNP-DNRLFTKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIAPTVFGANPAINPNILAKAFQVDPRVVMDLQTKF 221          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.052e-45
Identity = 91/141 (64.54%), Postives = 107/141 (75.89%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T  NV QI GLNTLGIS  R+DYAPYG  PPHIHPRA+EI  +LEG+LYVGFVTS+   N L  KVLNKGDVFVFPQGLIHFQFN G  +  A +AL+SQ PG +TIA+ VFG+ P I+ D L KAFQ++ KIV  +Q +F
Sbjct:   77 TGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTILEGSLYVGFVTSNP-ENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGVITIANAVFGSKPFISDDILAKAFQVEKKIVDRIQAQF 216          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.430e-44
Identity = 88/141 (62.41%), Postives = 106/141 (75.18%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T  NV Q+PGLNTLGIS  RIDYA +G  PPH HPRA+EI  VLEG+LYVGFVTS+   N L  KV+NKGDVFVFP+GL+HFQFN G T+A A  AL+SQ PG +T+A+ VFG+ PSI  D L KAFQ++  +V  +Q KF
Sbjct:   84 TAVNVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTSNP-ENKLFTKVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVITVANAVFGSKPSITDDILAKAFQVEKTVVDQIQAKF 223          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.480e-44
Identity = 88/141 (62.41%), Postives = 105/141 (74.47%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T  NV QIPGLNT+G+S  RIDYAP G  PPH HPRA+EI  VLEG+LYVGFV S+   N L  KVLNKGDVFVFPQGL+HFQFN G  NA A +AL+SQ PG +T+ + VFG+ PSI+ D L KAFQ+D  I+  +Q +F
Sbjct:   84 TTVNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGSLYVGFVISNP-ENKLFTKVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALSSQNPGVITVGNAVFGSKPSISDDILAKAFQVDKNIIDRIQAQF 223          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.480e-44
Identity = 89/141 (63.12%), Postives = 105/141 (74.47%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T  NV QIPGLNTLGIS  RIDY   GQ PPH HPRA+EI LV EGTL+VGF +S    N L  K LNKGDVFVFP+GLIHFQ NIGK  A A+++L+SQ PG + I +T+FG+ P I+P+ L KAFQLDPK++  LQ KF
Sbjct:   83 TTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFP-ENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGSKPPIDPNVLAKAFQLDPKVIIQLQKKF 222          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL85_ORYSJ (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.702e-43
Identity = 93/143 (65.03%), Postives = 107/143 (74.83%), Query Frame = -2
Query:  177 NVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 602
            NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EI  VLEGTLYVGFVTS+  NNTL +KVLNKGDVFVFPQGLIHFQFN      A A +AL+SQ PG +TIA+ VFG+ P I+ + L KAFQ++   +  LQ +F   N
Sbjct:   81 NVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPQGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAKAFQVEKGTIDWLQAQFWENN 222          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 1.702e-43
Identity = 84/141 (59.57%), Postives = 107/141 (75.89%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T  NV  + GLNTLGIS  RIDYAP GQ PPH HPRA+EI +V +GTL VGF++S+Q  N L AK LN GDVFVFP+GLIHFQFN+G T A A +AL+SQ  G +TIA+T+FG+ P ++P+ L +AFQ+D   V++LQ +F
Sbjct:   82 TTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHFQFNLGGTPAVAIAALSSQNAGVITIANTIFGSKPDVDPNVLARAFQMDVNAVRNLQARF 222          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.224e-43
Identity = 92/143 (64.34%), Postives = 107/143 (74.83%), Query Frame = -2
Query:  177 NVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 602
            NV QIPGLNTLGIS  RIDYAP G+ PPH HPRA+EI  VLEGTLYVGFVTS+  NNTL +KVLNKGDVFVFP+GLIHFQFN      A A +AL+SQ PG +TIA+ VFG+ P I+ D L KAFQ++   +  LQ +F   N
Sbjct:   82 NVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALSSQNPGAITIANAVFGSKPPISDDILAKAFQVEKGTIDWLQAQFWENN 223          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.224e-43
Identity = 92/142 (64.79%), Postives = 110/142 (77.46%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T  NV Q+PGLNTLGIS  R+D+AP G  PPH HPRA+EIF VLEGTLYVGFVTS+  +N L++KVLNKGDVFVFP+GLIHFQFN      A A +AL+SQ PG +TIA+ VFG+NP I+ D L KAFQ+D KI+  LQ +F
Sbjct:   81 TLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNP-DNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPGVITIANAVFGSNPPISDDILMKAFQVDKKIIDLLQAQF 221          
The following BLAST results are available for this feature:
BLAST of DN618156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL111_ARATH5.654e-4766.67Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
GL110_ARATH2.149e-4666.67Germin-like protein subfamily 1 member 10 OS=Arabi... [more]
GL21_ORYSJ4.052e-4564.54Putative germin-like protein 2-1 OS=Oryza sativa s... [more]
GL23_ORYSJ3.430e-4462.41Putative germin-like protein 2-3 OS=Oryza sativa s... [more]
GL22_ORYSJ4.480e-4462.41Putative germin-like protein 2-2 OS=Oryza sativa s... [more]
GL112_ARATH4.480e-4463.12Putative germin-like protein subfamily 1 member 12... [more]
GL85_ORYSJ1.702e-4365.03Germin-like protein 8-5 OS=Oryza sativa subsp. jap... [more]
GL18_ARATH1.702e-4359.57Germin-like protein subfamily 1 member 8 OS=Arabid... [more]
GL87_ORYSJ2.224e-4364.34Germin-like protein 8-7 OS=Oryza sativa subsp. jap... [more]
GL82_ORYSJ2.224e-4364.79Germin-like protein 8-2 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C24_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618156 ID=DN618156; Name=DN618156; organism=Citrus sinensis; type=EST; length=612bp
CTGCTAAATAAAAACAATAACAATTATGTTTATTACATGGCCACAGTCAG
CCTGGAGAGAGGTTCATGAGAGACCTCTTTTATTACATTAATTAAGATAT
GATAATCTGGAGATAAAGTAATACAGCCACTAGTGAAGAGGCCATTTATA
TTAAAGCTCATTAATTCCTTCTCCTAATTGCCATTAATGAACTTATTTTG
AAGATCTTTCACTATCTTTGGGTCCAACTGGAATGCCTTGCCAAGAAAAT
CGGGATTGATTGAAGGATTGGCTCCAAAGACTGTGTCGGCTATGGTAACT
TCACCCGGGAATTGGCTGTTTAGAGCAGAATAGGCAGCTGCATTTGTTTT
TCCAATGTTGAATTGGAAGTGAATCAAACCTTGTGGAAACACAAAAACAT
CTCCCTTATTTAGAACTTTTGCGATGAGTGTGTTATTCAGTTGGTCTGAT
GTCACAAAACCGACATAAAGAGTTCCTTCCAGGACTAAGAAGATTTCGCT
GGCACGGGGGTGAATGTGAGGTGGCCTTTGGCCATATGGTGCATAGTCAA
TACGGAATGCTGATATGCCAAGGGTGTTGAGTCCTGGAATTTGCTCAACA
TTTGCATCTGTT
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