DN618156

Overview
NameDN618156
Unique NameDN618156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.636e-41
Identity = 83/141 (58.87%), Postives = 103/141 (73.05%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T  +V +IPGLNTLG+S  R+D+A  GQ PPHIHPRA+EI +V +G L VGFV+S+Q NN L  KVL +GDVFVFP GLIHFQ N+ +T A A++   SQ PG + IAD VFG+NPSI  + L KAFQLD K+V+ L   F
Sbjct:   82 TTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPGTIRIADAVFGSNPSIPQEVLAKAFQLDVKLVRFLHIVF 222          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL812_ORYSJ (Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.005e-40
Identity = 86/146 (58.90%), Postives = 106/146 (72.60%), Query Frame = -2
Query:  177 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 611
            T+ NV + PGLNTLGIS  RIDYAP G  PPHIHPRA+E+  VLEGTLYVGFVTS+   N L +KV+ KGDVFVFP+ +IHFQ N+     A A SAL+SQ PG +TIA  VFG+ P I+ D L KAFQ++ K++  LQ++F   N
Sbjct:   80 TNLNVMEFPGLNTLGISLARIDYAPMGVNPPHIHPRATELLTVLEGTLYVGFVTSNP--NKLFSKVVCKGDVFVFPKAMIHFQMNLDHDKPAVAQSALSSQNPGVITIASAVFGSQPPISDDVLTKAFQVEKKLIDWLQSQFWENN 223          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.126e-40
Identity = 81/141 (57.45%), Postives = 100/141 (70.92%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            TD +V +IPGLNTLGI+  R+D+AP GQ PPHIHPRAS+I LVL+G L VGFV+S+  N TL +K+L  GDVF FP GL+ F  N GKT+A A   + SQ PG + I D VFG+NP I+P  L KAF LD  IV+ +Q  F
Sbjct:   81 TDVDVRRIPGLNTLGIAIARLDFAPGGQLPPHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPGVIPIGDAVFGSNPLIDPKLLAKAFALDVNIVRHVQRVF 221          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.695e-40
Identity = 84/146 (57.53%), Postives = 105/146 (71.92%), Query Frame = -2
Query:  177 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 611
            T+ NV   PGLNTLGIS  RIDYAP G  PPHIHPRA+E+  VLEGTLYVGFVTS+   N L +KV++KGD FVFP+ +IHFQ N+     A A S+LNSQ PG +TIA  VFG+ P I+ D L KAFQ++ K++  L+++F   N
Sbjct:   80 TNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRATELLTVLEGTLYVGFVTSNP--NRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNSQNPGVITIASAVFGSKPPISDDVLTKAFQVEKKVIDWLKSQFWESN 223          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL83_ORYSJ (Germin-like protein 8-3 OS=Oryza sativa subsp. japonica GN=GER2 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.695e-40
Identity = 83/146 (56.85%), Postives = 106/146 (72.60%), Query Frame = -2
Query:  177 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 611
            T+ NV   PGLNTLGIS  RIDYAP G  PPH+HPRA+E+  VLEGTLYVGFVTS+   N L +KV++KGDVFVFP+ +IHFQ N+     A A SAL+SQ PG +TIA  +FG+ P I+ D L KAFQ++ K++  L+++F   N
Sbjct:   80 TNLNVINFPGLNTLGISLARIDYAPMGVNPPHVHPRATELLTVLEGTLYVGFVTSNP--NRLFSKVVHKGDVFVFPKAMIHFQMNLDHNKPAVAQSALSSQNPGVITIASAIFGSTPPISDDVLVKAFQVEKKVIDWLKSQFSENN 223          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL14_ARATH (Germin-like protein subfamily 1 member 4 OS=Arabidopsis thaliana GN=At3g04180 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.948e-39
Identity = 82/141 (58.16%), Postives = 99/141 (70.21%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T  +VE++PGLNTLG+   R D+AP G  PPH HPR S+IFLV++G L+VGFV+S++ N TL  KVL  GDVFVFP+GLIHF  NIG+TNA   SA  SQ PG + I D VFG+ P I+P  L KAF LD   VK LQ  F
Sbjct:   81 TVVDVERLPGLNTLGVDIARYDFAPGGLDPPHTHPRGSQIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIHFHANIGETNAVVISAGGSQDPGRIIIGDAVFGSKPLIDPKVLAKAFALDYNKVKYLQAVF 221          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.323e-39
Identity = 79/141 (56.03%), Postives = 105/141 (74.47%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T A+VE++PGLNT+G+S  RIDYAP+G  PPH HPRA+EI  V EGTL VGFVT+    N L  + ++KG+VFVFP+GL+HFQ N G T+A A +A NSQ PG  +IADT+FGA P +  D L +AFQ+D  +V+ +++KF
Sbjct:   81 TAASVERLPGLNTMGVSMARIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFVTTA---NKLFTRTVSKGEVFVFPRGLVHFQRNSGNTSALAIAAFNSQLPGTQSIADTLFGAAPPLPSDTLARAFQVDGGMVESIKSKF 218          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.154e-38
Identity = 84/143 (58.74%), Postives = 98/143 (68.53%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T   V ++PGLNTLGIS  RID+AP GQ PPH HPRA+EI  VL+GTL VGFVTS+Q    N    K+L  GDVFVFPQGLIHFQ N G   A A +AL+SQ PG +TIA+ VFG+ P I  D L KAF +D   V  +Q KF
Sbjct:   84 TPVTVNELPGLNTLGISFARIDFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGGNLQFTKLLGPGDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGVITIANAVFGSTPPILDDVLAKAFMIDKDQVDWIQAKF 226          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL15_ARATH (Germin-like protein subfamily 1 member 5 OS=Arabidopsis thaliana GN=At3g04190 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.674e-38
Identity = 80/141 (56.74%), Postives = 98/141 (69.50%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T  +V+++PGLNTLG+   RID+AP G  PPH HPR SEIFLV++G L+VGFV+S++ N TL  KVL  GDVFVFP+GLI F  NIGKTNA   +A  SQ PG + I + VFG+ P I+P  L KAF LD   VK  Q  F
Sbjct:   81 TVVDVKRMPGLNTLGVDIARIDFAPGGLYPPHTHPRGSEIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIQFHANIGKTNAVVIAATGSQNPGRIIIGNAVFGSKPLIDPKVLAKAFALDFNKVKYFQAVF 221          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.798e-38
Identity = 78/141 (55.32%), Postives = 103/141 (73.05%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T ANVEQ+PGLNTLG+S  RIDYAP G  PPH HPRASE+  V+EG L VGF+T+    N L++K + KG+VFVFP+GL+HFQ N GK  AA  SA NSQ PG  +I  T+FGA+P++  D L + FQ++ + V+ +++KF
Sbjct:   86 TTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTA---NVLVSKQITKGEVFVFPRGLVHFQKNNGKIPAAVVSAFNSQLPGTQSIPITLFGASPTVPDDVLAQTFQINIEDVQQIKSKF 223          
The following BLAST results are available for this feature:
BLAST of DN618156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL16_ARATH4.636e-4158.87Germin-like protein subfamily 1 member 6 OS=Arabid... [more]
GL812_ORYSJ3.005e-4058.90Germin-like protein 8-12 OS=Oryza sativa subsp. ja... [more]
GL12_ARATH5.126e-4057.45Putative germin-like protein subfamily 1 member 2 ... [more]
GL84_ORYSJ6.695e-4057.53Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]
GL83_ORYSJ6.695e-4056.85Germin-like protein 8-3 OS=Oryza sativa subsp. jap... [more]
GL14_ARATH1.948e-3958.16Germin-like protein subfamily 1 member 4 OS=Arabid... [more]
GL32_ORYSJ3.323e-3956.03Putative germin-like protein 3-2 OS=Oryza sativa s... [more]
GL41_ORYSJ2.154e-3858.74Germin-like protein 4-1 OS=Oryza sativa subsp. jap... [more]
GL15_ARATH3.674e-3856.74Germin-like protein subfamily 1 member 5 OS=Arabid... [more]
NEC1_NICPL4.798e-3855.32Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C24_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618156 ID=DN618156; Name=DN618156; organism=Citrus sinensis; type=EST; length=612bp
CTGCTAAATAAAAACAATAACAATTATGTTTATTACATGGCCACAGTCAG
CCTGGAGAGAGGTTCATGAGAGACCTCTTTTATTACATTAATTAAGATAT
GATAATCTGGAGATAAAGTAATACAGCCACTAGTGAAGAGGCCATTTATA
TTAAAGCTCATTAATTCCTTCTCCTAATTGCCATTAATGAACTTATTTTG
AAGATCTTTCACTATCTTTGGGTCCAACTGGAATGCCTTGCCAAGAAAAT
CGGGATTGATTGAAGGATTGGCTCCAAAGACTGTGTCGGCTATGGTAACT
TCACCCGGGAATTGGCTGTTTAGAGCAGAATAGGCAGCTGCATTTGTTTT
TCCAATGTTGAATTGGAAGTGAATCAAACCTTGTGGAAACACAAAAACAT
CTCCCTTATTTAGAACTTTTGCGATGAGTGTGTTATTCAGTTGGTCTGAT
GTCACAAAACCGACATAAAGAGTTCCTTCCAGGACTAAGAAGATTTCGCT
GGCACGGGGGTGAATGTGAGGTGGCCTTTGGCCATATGGTGCATAGTCAA
TACGGAATGCTGATATGCCAAGGGTGTTGAGTCCTGGAATTTGCTCAACA
TTTGCATCTGTT
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