DN618156

Overview
NameDN618156
Unique NameDN618156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL13_ARATH (Germin-like protein subfamily 1 member 3 OS=Arabidopsis thaliana GN=At3g04170 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.798e-38
Identity = 79/138 (57.25%), Postives = 96/138 (69.57%), Query Frame = -2
Query:  189 NVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 602
            N   IPGLNTLG+   RID+AP G  PPHIHPRASEI LV++G L VGFV+S+  N TL +K+L  GDVFV P GL+ F  NIGKTNA A  A+ SQ PG +++ D VFG+ P I+P  L KAF LD  IV+ L+  F
Sbjct:   81 NPANIPGLNTLGVGIARIDFAPGGLIPPHIHPRASEIILVIKGKLLVGFVSSNDYNYTLFSKILYPGDVFVHPIGLVQFHANIGKTNAVAIGAVGSQNPGYISVGDAVFGSKPPIDPKILAKAFALDINIVRYLRKVF 218          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.381e-37
Identity = 77/141 (54.61%), Postives = 102/141 (72.34%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T ANVEQ+PGLNTLG+S  RIDYAP G  PPH HPRASE+  V+EG L VGF+T+    N L++K + KG+VFVFP+GL+HFQ N G+  AA  SA NSQ PG  +I  T+FGA+P +  D L + FQ++ + V+ +++KF
Sbjct:   86 TTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTA---NVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQINTEDVQQIKSKF 223          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL25_ARATH (Probable germin-like protein subfamily 2 member 5 OS=Arabidopsis thaliana GN=At5g26700 PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 6.928e-37
Identity = 81/141 (57.45%), Postives = 100/141 (70.92%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T ANVE++PGLNTLG+S  RIDYAP G  PPH+HPRASEI  VLEG LYVGFVT+      LIAK LNKGDVF FP+GLIHFQ NI  + A+  +A +SQ PG  ++  ++FGA P    D L K+FQL  K VK ++ ++
Sbjct:   75 TGANVEKLPGLNTLGLSMSRIDYAPNGLNPPHVHPRASEIIFVLEGQLYVGFVTT---AGKLIAKNLNKGDVFTFPKGLIHFQKNIANSPASVLAAFDSQLPGTQSLVASLFGALPD---DILAKSFQLKHKQVKKIKLRY 209          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.928e-37
Identity = 77/142 (54.23%), Postives = 103/142 (72.54%), Query Frame = -2
Query:  186 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFI 611
            T A+VE +PGLNT+G+S  RIDYAP+G  PPH HPRA+EI  V+EG+L VGFVT+    N L  + + KG+VFVFP+GL+HFQ N G T A A +ALNSQ PG  +IA  +FGA P +  D L +AFQ+D  +V+ +++KF+
Sbjct:   81 TAASVESLPGLNTMGVSMARIDYAPWGLNPPHTHPRATEIIFVVEGSLDVGFVTTA---NKLFTRTVCKGEVFVFPRGLVHFQKNNGNTPAFAIAALNSQLPGTQSIAAALFGAAPPLPSDTLARAFQVDGGMVEFIKSKFV 219          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.000e-35
Identity = 76/140 (54.29%), Postives = 99/140 (70.71%), Query Frame = -2
Query:  192 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNK 611
            T ANVE++PGLNTLG+S  RIDYAP G  PPH HPRA+E+  VL+GTL VGF+T+    N L  K ++ GDVFVFP+GL+HFQ N G T AA  SA NSQ PG  ++A T+F A+P +    L KAFQ+  K V+ ++++
Sbjct:   79 TGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDVGFITT---ANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFAASPEVPDGVLTKAFQVGTKEVEKIKSR 215          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL23_ARATH (Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.229e-35
Identity = 74/141 (52.48%), Postives = 96/141 (68.09%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T ANVE++PGLNTLG+S  RIDYAP G  PPH+HPRASE   VLEG L+VGF+T+      LI+K +NKGDVFVFP+ L+HFQ N  K  A+  +A +SQ PG   +  ++FG+NP I  D L KAF      ++ ++ KF
Sbjct:   78 TGANVEKVPGLNTLGVSISRIDYAPGGLNPPHLHPRASEAIFVLEGRLFVGFLTT---TGKLISKHVNKGDVFVFPKALLHFQQNPNKAPASVLAAFDSQLPGTQVVGPSLFGSNPPIPDDLLAKAFGAAAPEIQKIKGKF 215          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.911e-35
Identity = 74/140 (52.86%), Postives = 96/140 (68.57%), Query Frame = -2
Query:  192 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNK 611
            T ANVE+IPGLNTL +S  RIDYAP G  PPH HPRA+E+  VLEG L VGF+T+    N L  K +  G+VFVFP+GL+HFQ N GK+ A+  SA NSQ PG  ++A T+F A P++  D L K FQ+  K+V  ++ +
Sbjct:   78 TGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITT---ANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTKTFQVGSKMVDKIKER 214          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 3.802e-35
Identity = 76/141 (53.90%), Postives = 96/141 (68.09%), Query Frame = -2
Query:  189 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 611
            T ANV++IPGLNTLG+S  RIDYAP G  PPH HPRA+E+  VLEG L VGF+T+    N LIAK + KG+ FVFP+GL+HFQ N G   A   +  NSQ PG V I  T+F A P +  + L KAFQ+  K V+ +++KF
Sbjct:   76 TGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITT---TNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNATPPVPDNVLTKAFQIGTKEVQKIKSKF 213          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.802e-35
Identity = 79/137 (57.66%), Postives = 95/137 (69.34%), Query Frame = -2
Query:  189 IPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGK-AFQLDPKIVKDLQNKF 590
            +PGLNTLGIS  R+D+AP+G  PPH HPRA+E+F+VLEGT YVGFVTS+  +  N L AKVLNKGDVFVFPQGLIHFQ NIG       S L+SQ PG +TIA+ VFG      P+ L +  F L P I   + + F
Sbjct:   87 LPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIHFQLNIGNYPGVGISGLSSQNPGVITIANAVFG------PEHLSQLMFLLRPSISMRIWSSF 217          
BLAST of DN618156 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.218e-34
Identity = 69/139 (49.64%), Postives = 97/139 (69.78%), Query Frame = -2
Query:  189 ANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 605
            ANV   PGLNTLG+S   +++AP G  PPH HPRA+E  +V+EG+++VGF+T+   NNTL +KVLN G++FV P+GL+HFQ+N+GK  A   ++ NSQ PG   +  T+FG+NP+I    L K F+ D   V  L++KF
Sbjct:   83 ANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTT---NNTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNPTIPNAVLTKTFRTDDVTVNKLKSKF 218          
The following BLAST results are available for this feature:
BLAST of DN618156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL13_ARATH4.798e-3857.25Germin-like protein subfamily 1 member 3 OS=Arabid... [more]
NEC1_NICLS2.381e-3754.61Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
GL25_ARATH6.928e-3757.45Probable germin-like protein subfamily 2 member 5 ... [more]
GL13_ORYSJ6.928e-3754.23Germin-like protein 1-3 OS=Oryza sativa subsp. jap... [more]
GL52_ORYSJ1.000e-3554.29Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL23_ARATH2.229e-3552.48Germin-like protein subfamily 2 member 3 OS=Arabid... [more]
GL22_ARATH2.911e-3552.86Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
RHRE_PEA3.802e-3553.90Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GLP1_MESCR3.802e-3557.66Germin-like protein OS=Mesembryanthemum crystallin... [more]
GLT2_ARATH3.218e-3449.64Germin-like protein subfamily T member 2 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C24_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618156 ID=DN618156; Name=DN618156; organism=Citrus sinensis; type=EST; length=612bp
CTGCTAAATAAAAACAATAACAATTATGTTTATTACATGGCCACAGTCAG
CCTGGAGAGAGGTTCATGAGAGACCTCTTTTATTACATTAATTAAGATAT
GATAATCTGGAGATAAAGTAATACAGCCACTAGTGAAGAGGCCATTTATA
TTAAAGCTCATTAATTCCTTCTCCTAATTGCCATTAATGAACTTATTTTG
AAGATCTTTCACTATCTTTGGGTCCAACTGGAATGCCTTGCCAAGAAAAT
CGGGATTGATTGAAGGATTGGCTCCAAAGACTGTGTCGGCTATGGTAACT
TCACCCGGGAATTGGCTGTTTAGAGCAGAATAGGCAGCTGCATTTGTTTT
TCCAATGTTGAATTGGAAGTGAATCAAACCTTGTGGAAACACAAAAACAT
CTCCCTTATTTAGAACTTTTGCGATGAGTGTGTTATTCAGTTGGTCTGAT
GTCACAAAACCGACATAAAGAGTTCCTTCCAGGACTAAGAAGATTTCGCT
GGCACGGGGGTGAATGTGAGGTGGCCTTTGGCCATATGGTGCATAGTCAA
TACGGAATGCTGATATGCCAAGGGTGTTGAGTCCTGGAATTTGCTCAACA
TTTGCATCTGTT
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