DN618154

Overview
NameDN618154
Unique NameDN618154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 5.279e-44
Identity = 85/129 (65.89%), Postives = 105/129 (81.40%), Query Frame = -3
Query:  196 SFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 582
            SFL S+DP++++ AMGT+D IIDT+SA H ++PLLGLLK  GKLV VG P KPLEL V  L+ GRK + GS+ GGMKETQEM+DF  KHNITADIE+I M  +NTAMERL KADV+YRFVID+AN+ ++
Sbjct:  230 SFLVSKDPEKMKAAMGTMDYIIDTISAAHSLMPLLGLLKLNGKLVTVGLPSKPLELSVFPLVAGRKLIGGSNIGGMKETQEMLDFCGKHNITADIELIKMHEINTAMERLHKADVKYRFVIDVANSFSS 358          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.698e-42
Identity = 81/130 (62.31%), Postives = 107/130 (82.31%), Query Frame = -3
Query:  193 SFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAAT 582
            SFL S DP++++ A GT+D IIDT+SAVH ++ LLGLLK  GKLV VG P KPL+LP+  L+ GRK + GS+ GG+KETQEM+DF  KHNI A+IE+I MD +NTA+ERL+KADV+YRFVID+AN+L+++
Sbjct:  223 SFLLSSDPEKMKAATGTMDYIIDTISAVHSLVSLLGLLKLNGKLVTVGLPSKPLQLPIFPLVAGRKLIGGSNFGGLKETQEMLDFCGKHNIAANIELIKMDEINTAIERLSKADVKYRFVIDVANSLSSS 352          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 3.541e-40
Identity = 82/127 (64.57%), Postives = 102/127 (80.31%), Query Frame = -3
Query:  202 SFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 582
            +F+ S++ D++  A GT+DGII+TVSA  PI PLLGLLK  GK++LVG P+KP+E+P  +L+   KT++GS  GGM +T EMID AAKH +TA+IEVI  DYVNTAMERLAKADVRYRFVIDI NTL
Sbjct:  224 AFVVSKNADEMNAATGTMDGIINTVSANIPIAPLLGLLKPNGKMILVGLPEKPMEIPPFALVASNKTLAGSCIGGMADT-EMIDLAAKHGVTAEIEVIGADYVNTAMERLAKADVRYRFVIDIGNTL 349          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.541e-40
Identity = 79/127 (62.20%), Postives = 102/127 (80.31%), Query Frame = -3
Query:  202 SFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 582
            SFL + D  +++ A+GT+D IIDTVSA H +LPL  LLK  GKLV +G P+KPL+LP+ SL++GRK V GS  GGMKETQEM++F AKH I +DIE+I M  +N+AM+RLAK+DVRYRFVID+AN+L
Sbjct:  227 SFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANSL 353          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.943e-38
Identity = 77/129 (59.69%), Postives = 100/129 (77.52%), Query Frame = -3
Query:  196 SFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 582
            +F+ S   ++++ A  T+DG+I+TVSA  P+ P L LLK  GK++LVG P+ PLE+P  SL+ G +T++GS+ GGM +TQEMI+ AAKH +TADIEVI  D VNTAMERLAKADVRYRFVID+ NTL A
Sbjct:  234 AFVVSSSAEEMEAARSTMDGVINTVSANTPMAPYLALLKPNGKMILVGLPENPLEVPPFSLVHGNRTLAGSNIGGMADTQEMIELAAKHGVTADIEVIGADDVNTAMERLAKADVRYRFVIDVGNTLHA 362          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.653e-38
Identity = 76/127 (59.84%), Postives = 99/127 (77.95%), Query Frame = -3
Query:  202 SFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 582
            SFL + D  +++ A+GT+D IIDTVSA H +LPL  LLK  GKLV +G  +KPL+LP+  L++GRK V GS  GGMKETQEM++F AKH I +DIE+I M  +N+AM+RL K+DVRYRFVID+AN+L
Sbjct:  226 SFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLVKSDVRYRFVIDVANSL 352          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.066e-36
Identity = 71/125 (56.80%), Postives = 95/125 (76.00%), Query Frame = -3
Query:  205 FLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 579
            FL SRD  Q+  A GT+DGI++TVSA HP+ PL  L+K   ++V VGAP +PLELP  +++ G K ++G+  GG+++ Q M+DFA +H ITA++EVI MDYVNTAMERL K DVRYRFVID+A +
Sbjct:  302 FLVSRDAGQMAAAAGTMDGILNTVSAWHPVAPLFALMKPMAQMVFVGAPTRPLELPAYAIVPGGKGITGNCVGGIRDCQAMLDFAGEHGITAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGS 426          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.102e-36
Identity = 73/131 (55.73%), Postives = 101/131 (77.10%), Query Frame = -3
Query:  190 SFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAATK 582
            +FL S + +Q++ A GT+DGIIDTVSAVH + PL+ LL++ G+LV VG+P KP++L +  L    K+V+GS  GGM++TQEM+DFA +H + A++EVI M+ VN AMERL K DVRYRFVID+ANT+A  +
Sbjct:  232 AFLLSTNAEQMKAAAGTMDGIIDTVSAVHDLTPLITLLRTHGQLVPVGSPGKPVQLALYPLQSDGKSVAGSMIGGMRDTQEMVDFAVEHGVAAEVEVIGMEDVNGAMERLQKGDVRYRFVIDVANTMARAR 362          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 9.025e-36
Identity = 74/123 (60.16%), Postives = 94/123 (76.42%), Query Frame = -3
Query:  214 SFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDI 582
            +F+ S D  Q+Q    +LD IIDTV+A H + P+L LLK  GKLVLVGAP+KP+ELP   LI G++TVSGS TGGMKETQEM+D   +HNIT DIE++S D +N A+ RLA+ DVRYRFVI++
Sbjct:  232 NFVVSTDQKQMQAMTRSLDYIIDTVAATHSLGPILELLKVNGKLVLVGAPEKPVELPSFPLIFGKRTVSGSMTGGMKETQEMMDICGEHNITCDIEIVSTDRINDALARLARNDVRYRFVINV 354          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 9.025e-36
Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = -3
Query:  196 FLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 579
            FL SRD  Q+  A  T+DGI++TVSA HPI PL  L+K   ++V VG P +PLELP  +++ G K ++G+  GG+++ Q M+DFA +H ITA++EVI MDYVNTAMERL K DVRYRFVID+A +  A
Sbjct:  305 FLVSRDAGQMAAAAATMDGILNTVSAWHPIAPLFSLMKPMAQMVFVGGPTRPLELPAYAIVPGGKGITGNCVGGIRDCQAMLDFAGEHGITAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGSSLA 432          
The following BLAST results are available for this feature:
BLAST of DN618154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
MTDH_MEDSA5.279e-4465.89Probable mannitol dehydrogenase OS=Medicago sativa... [more]
MTDH1_STYHU1.698e-4262.31Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CADH5_ORYSJ3.541e-4064.57Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
CADH2_ARATH3.541e-4062.20Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
CADH3_ORYSJ1.943e-3859.69Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
CADH3_ARATH5.653e-3859.84Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CAD8B_ORYSJ1.066e-3656.80Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CADH9_ORYSJ3.102e-3655.73Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CADH6_ORYSJ9.025e-3660.16Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]
CAD8C_ORYSJ9.025e-3655.47Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618154 ID=DN618154; Name=DN618154; organism=Citrus sinensis; type=EST; length=584bp
TTATTTCATTAACATTTATAGTTTTTTGGCAATCACGACATAATTAGGGT
GATGTAACTGGAAATTAAAAGTAATTTAAGCGCTAAAAGAGTGTAATGAT
CGAGGGAGCATTACATATAGCAAAGTGGATCATGGAACAAAGTTGTGAAT
TGAAGACACCAATCTGATTCTGATTCTGATTCTTCAAGGTTTGGTGGCGG
CCAAGGTGTTTGCAATATCAATGACAAATCGATACCGAACATCAGCCTTG
GCGAGCCGCTCCATTGCCGTATTGACATAATCCATCGAAATAACCTCAAT
GTCAGCTGTTATATTGTGTTTTGCTGCAAAATCAATCATCTCTTGCGTCT
CTTTCATTCCCCCAGTGCTGCTCCCTGACACCGTCTTCCTCCCCATAATT
AAGGAAATCACAGGTAGCTCGAGTGGCTTGTCCGGAGCACCAACCAGAAC
AAGCTTGCCCTGGGACTTTAATAGACCGAGCAATGGCAAAATGGGGTGCA
CAGCGGACACCGTGTCAATAATACCATCCAATGTGCCCATGGCACCCTGC
AATTGGTCAGGGTCACGGCTATTCAAAAATGAAT
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