DN618154

Overview
NameDN618154
Unique NameDN618154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.218e-25
Identity = 56/117 (47.86%), Postives = 79/117 (67.52%), Query Frame = -3
Query:  214 DPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDI 564
            D  ++     +LD +IDTV   H + P L LLK  GKL+L+G  + PL+     L++GRK ++GS  G MKET+EM++F  +  +++ IEV+ MDYVNTA ERL K DVRYRFV+D+
Sbjct:  234 DQAKMSELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDV 350          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.202e-25
Identity = 56/125 (44.80%), Postives = 82/125 (65.60%), Query Frame = -3
Query:  205 FLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 579
            ++ S DP ++Q    +LD IIDTV   HP+ P L  LK  GKL+L+G  + PL+     +I+GRK +SGS  G +KET+E++ F  +  +T+ IE + +D +N A ERL K DVRYRFV+D+A +
Sbjct:  230 YVVSSDPAEMQRLADSLDYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTPLQFVTPLVILGRKVISGSFIGSIKETEEVLAFCKEKGLTSTIETVKIDELNIAFERLRKNDVRYRFVVDVAGS 354          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.168e-25
Identity = 58/121 (47.93%), Postives = 82/121 (67.77%), Query Frame = -3
Query:  217 LNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELP-VISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVID 576
            +NSR+ D++   + + D I++TV+A H +     LLK  G + LVGAP  P + P V +LIM R+ ++GS  GG+ ETQEM+DF A+H I ADIE+I  D +N A ER+ + DV+YRFVID
Sbjct:  223 VNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVID 343          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.597e-24
Identity = 57/126 (45.24%), Postives = 80/126 (63.49%), Query Frame = -3
Query:  205 SFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 582
            ++L S D   +  A  +LD IIDTV   HP+ P L LLK  GKLVL+G   +PL      +++GRK ++GS  G + ET E++ F     +T+ IEV+ M YVN A+ERL + DVRYRFV+D+A +
Sbjct:  228 AYLVSSDAAAMAAAADSLDYIIDTVPVHHPLEPYLALLKLDGKLVLLGVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGS 353          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.646e-24
Identity = 55/124 (44.35%), Postives = 83/124 (66.94%), Query Frame = -3
Query:  211 SFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIA 582
            S+  + DPD  +   G  D I++TVSA   +   L LL   G LV +G P+ P+ +P  +L + R++++GS+ GG+ ETQEM++F A+H +T +IE+I  DY+N A ER+  +DVRYRFVIDI+
Sbjct:  221 SYYATADPDTFRKLRGGFDLILNTVSANLDLGQYLNLLDVDGTLVELGIPEHPMAVPAFALALMRRSLAGSNIGGIAETQEMLNFCAEHGVTPEIELIEPDYINDAYERVLASDVRYRFVIDIS 344          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.646e-24
Identity = 55/124 (44.35%), Postives = 83/124 (66.94%), Query Frame = -3
Query:  211 SFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIA 582
            S+  + DPD  +   G  D I++TVSA   +   L LL   G LV +G P+ P+ +P  +L + R++++GS+ GG+ ETQEM++F A+H +T +IE+I  DY+N A ER+  +DVRYRFVIDI+
Sbjct:  221 SYYATADPDTFRKLRGGFDLILNTVSANLDLGQYLNLLDVDGTLVELGIPEHPMAVPAFALALMRRSLAGSNIGGIAETQEMLNFCAEHGVTPEIELIEPDYINDAYERVLASDVRYRFVIDIS 344          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.306e-23
Identity = 55/126 (43.65%), Postives = 79/126 (62.70%), Query Frame = -3
Query:  205 SFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 582
            ++L S D   +  A  +LD IIDTV   HP+ P L LLK  GK VL+G   +PL      +++GRK ++GS  G + ET E++ F     +T+ IEV+ M YVN A++RL + DVRYRFV+D+A +
Sbjct:  228 AYLVSSDAAAMAAAADSLDYIIDTVPVHHPLEPYLALLKLDGKHVLLGVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALDRLERNDVRYRFVVDVAGS 353          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.137e-23
Identity = 56/127 (44.09%), Postives = 83/127 (65.35%), Query Frame = -3
Query:  202 SFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 582
            +F+ S D DQ++    +LD ++DT S  H   P + LLK  G  VLVG P + +++   +L +G + ++GS TGG K TQ+M+DF A H I  +IEVI +  +N A+ER+ K D++YRFVIDI N+L
Sbjct:  229 NFVISSDHDQMKALEKSLDFLVDTASGDHAFDPYMSLLKIAGTYVLVGFPSE-IKISPANLNLGMRMLAGSVTGGTKITQQMLDFCAAHKIYPNIEVIPIQKINEALERVVKKDIKYRFVIDIKNSL 354          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: CADH1_ORYSJ (Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=CAD1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22
Identity = 56/126 (44.44%), Postives = 84/126 (66.67%), Query Frame = -3
Query:  205 SFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 582
            +F+ S D +Q++    +L+ IIDT S  HP  P L LLK  G + L+  P + +++   +L +G +++SGS TGG K+ QEMI+F A + I  DIE+I +DY+N A++RL   DVR+RFVIDI N+
Sbjct:  228 NFVVSSDENQMETLKSSLNFIIDTASGDHPFDPYLTLLKVGGVMALLSFPSE-IKVHPANLNLGGRSLSGSVTGGTKDIQEMINFCAANKIYPDIEMIKIDYINEALQRLVDRDVRFRFVIDIENS 352          
BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.265e-21
Identity = 55/126 (43.65%), Postives = 83/126 (65.87%), Query Frame = -3
Query:  205 SFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 582
            +F+ S D +Q++    +L  IIDT S  H   P L LLK  G +VL+  P + +++   +L +  ++++GS TGG K+ QEMI+F A +N+  DIE+I +DYVN A++RL   DVR+RFVIDI N+
Sbjct:  228 NFVISSDENQMESLKSSLHFIIDTASGDHQFDPYLSLLKVGGVMVLLSFPSE-IKVHPENLNLAARSLAGSVTGGTKDIQEMINFCAANNVYPDIEMIKIDYVNEALQRLINRDVRFRFVIDIENS 352          
The following BLAST results are available for this feature:
BLAST of DN618154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CADH5_ARATH3.218e-2547.86Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH4_ARATH4.202e-2544.80Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
YAHK_ECOLI7.168e-2547.93Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
CADH_MAIZE1.597e-2445.24Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]
ADHC_MYCTU4.646e-2444.35NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO4.646e-2444.35NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
CADH_SACOF2.306e-2343.65Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
CADH1_ARATH5.137e-2344.09Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
CADH1_ORYSJ2.549e-2244.44Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza... [more]
CADH4_ORYSJ1.265e-2143.65Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618154 ID=DN618154; Name=DN618154; organism=Citrus sinensis; type=EST; length=584bp
TTATTTCATTAACATTTATAGTTTTTTGGCAATCACGACATAATTAGGGT
GATGTAACTGGAAATTAAAAGTAATTTAAGCGCTAAAAGAGTGTAATGAT
CGAGGGAGCATTACATATAGCAAAGTGGATCATGGAACAAAGTTGTGAAT
TGAAGACACCAATCTGATTCTGATTCTGATTCTTCAAGGTTTGGTGGCGG
CCAAGGTGTTTGCAATATCAATGACAAATCGATACCGAACATCAGCCTTG
GCGAGCCGCTCCATTGCCGTATTGACATAATCCATCGAAATAACCTCAAT
GTCAGCTGTTATATTGTGTTTTGCTGCAAAATCAATCATCTCTTGCGTCT
CTTTCATTCCCCCAGTGCTGCTCCCTGACACCGTCTTCCTCCCCATAATT
AAGGAAATCACAGGTAGCTCGAGTGGCTTGTCCGGAGCACCAACCAGAAC
AAGCTTGCCCTGGGACTTTAATAGACCGAGCAATGGCAAAATGGGGTGCA
CAGCGGACACCGTGTCAATAATACCATCCAATGTGCCCATGGCACCCTGC
AATTGGTCAGGGTCACGGCTATTCAAAAATGAAT
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