DN618154

Overview
NameDN618154
Unique NameDN618154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN618154 vs. ExPASy Swiss-Prot
Match: YJGB_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjgB OS=Escherichia coli (strain K12) GN=yjgB PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 6.294e-13
Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = -3 
Query:  220 LNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVI 576
            +NSRDP  L+   G  D II+TV+      P    L   G    VGA   PL +P  +LI G ++VSGS+TG   E ++++ FAA+  +    E+  M  +N A++ +     RYR V+
Sbjct:  217 VNSRDPQALKALAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVL 335
The following BLAST results are available for this feature:
BLAST of DN618154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
YJGB_ECOLI6.294e-1335.29Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618154 ID=DN618154; Name=DN618154; organism=Citrus sinensis; type=EST; length=584bp
TTATTTCATTAACATTTATAGTTTTTTGGCAATCACGACATAATTAGGGT
GATGTAACTGGAAATTAAAAGTAATTTAAGCGCTAAAAGAGTGTAATGAT
CGAGGGAGCATTACATATAGCAAAGTGGATCATGGAACAAAGTTGTGAAT
TGAAGACACCAATCTGATTCTGATTCTGATTCTTCAAGGTTTGGTGGCGG
CCAAGGTGTTTGCAATATCAATGACAAATCGATACCGAACATCAGCCTTG
GCGAGCCGCTCCATTGCCGTATTGACATAATCCATCGAAATAACCTCAAT
GTCAGCTGTTATATTGTGTTTTGCTGCAAAATCAATCATCTCTTGCGTCT
CTTTCATTCCCCCAGTGCTGCTCCCTGACACCGTCTTCCTCCCCATAATT
AAGGAAATCACAGGTAGCTCGAGTGGCTTGTCCGGAGCACCAACCAGAAC
AAGCTTGCCCTGGGACTTTAATAGACCGAGCAATGGCAAAATGGGGTGCA
CAGCGGACACCGTGTCAATAATACCATCCAATGTGCCCATGGCACCCTGC
AATTGGTCAGGGTCACGGCTATTCAAAAATGAAT
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