DN618151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618151 vs. ExPASy Swiss-Prot
Match: RL21_MOUSE (60S ribosomal protein L21 OS=Mus musculus GN=Rpl21 PE=2 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 5.292e-34 Identity = 65/118 (55.08%), Postives = 89/118 (75.42%), Query Frame = 1 Query: 70 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARG 423 G R TR +F+RPFRK G +PL+TY+R YK GD VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R K+ND+ K +AK +G Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKG 123
BLAST of DN618151 vs. ExPASy Swiss-Prot
Match: RL21_CHILA (60S ribosomal protein L21 OS=Chinchilla lanigera GN=RPL21 PE=2 SV=3) HSP 1 Score: 142.124 bits (357), Expect = 9.026e-34 Identity = 64/118 (54.24%), Postives = 89/118 (75.42%), Query Frame = 1 Query: 70 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARG 423 G R TR +F+RP+RK G +PL+TY+R YK GD VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R K+ND+ K +AK +G Sbjct: 6 GKRRGTRYMFSRPYRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKG 123
BLAST of DN618151 vs. ExPASy Swiss-Prot
Match: RL21_CAPHI (60S ribosomal protein L21 OS=Capra hircus GN=RPL21 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.179e-33 Identity = 64/118 (54.24%), Postives = 89/118 (75.42%), Query Frame = 1 Query: 70 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARG 423 G R TR +F+RPFRK G +PL+TY+R Y+ GD VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R K+ND+ K +AK +G Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYRKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKG 123
BLAST of DN618151 vs. ExPASy Swiss-Prot
Match: RL21_CAEEL (60S ribosomal protein L21 OS=Caenorhabditis elegans GN=rpl-21 PE=1 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 9.980e-33 Identity = 66/126 (52.38%), Postives = 87/126 (69.05%), Query Frame = 1 Query: 55 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVI 432 M GLR TR +FAR FRK G LSTY YK GD VD+K NGA KGMP K YHGRTGR++NVT+ A+G+ +NK+V I+ KRI++R+EH++PS+C +F R K NDE + AK+ G+ + Sbjct: 1 MTNSKGLRRGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGRTGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQPV 126
BLAST of DN618151 vs. ExPASy Swiss-Prot
Match: RL21_ENTHI (60S ribosomal protein L21 OS=Entamoeba histolytica GN=RPL21 PE=2 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 2.718e-30 Identity = 62/127 (48.82%), Postives = 83/127 (65.35%), Query Frame = 1 Query: 55 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRK-------KKNDELKADAK 414 MP +G RTR LF RPFR G ST L TYK+GDYV + N ++ G+P+K +HG+TGRVWNV AIGV +NK+V NRI+ KR+H+ EH++PS C ++F RK K+N +LK + K Sbjct: 1 MPLSNGRNRRTRKLFKRPFRGHGLSNTSTILHTYKVGDYVTILCNSSIQHGLPYKAFHGKTGRVWNVNPHAIGVMVNKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNIQLKKEGK 127
BLAST of DN618151 vs. ExPASy Swiss-Prot
Match: RL21_PYUST (60S ribosomal protein L21 (Fragment) OS=Pyura stolonifera GN=RPL21 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 1.069e-26 Identity = 54/113 (47.79%), Postives = 81/113 (71.68%), Query Frame = 1 Query: 82 RTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKAR 420 R D+F++ FR++G IPL+ YL YK GD VD+K +G+V K PHK YHG+TGR++NVT+ A+G+ +NKQV RII KRI+VR+EH++ S+ F R +N+ + +A+ + Sbjct: 9 RGSDMFSKKFRERGAIPLNKYLTVYKKGDIVDIKGDGSVQKVCPHKVYHGKTGRIFNVTQHAVGIIVNKQVRGRIIAKRINVRIEHIKHSKSRISFIQRVHENERKRKEAREK 121
BLAST of DN618151 vs. ExPASy Swiss-Prot
Match: RL21_ENCCU (60S ribosomal protein L21 OS=Encephalitozoon cuniculi GN=RPL21 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.396e-26 Identity = 59/122 (48.36%), Postives = 84/122 (68.85%), Query Frame = 1 Query: 70 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVIS 435 G R TR LF++ RK G +S YL Y+IGD VD+ VN A+ KGMPHK+YHGRTGRV++V R++ V + K+V + + K+I VR+EHV+ SRC+EE + R E+ DA++RG V++ Sbjct: 5 GYRRGTRYLFSQDHRKHGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVYDVKPRSLNVALYKRVRGKYVIKKIIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVVLA 126
BLAST of DN618151 vs. ExPASy Swiss-Prot
Match: RL21_PIG (60S ribosomal protein L21 (Fragment) OS=Sus scrofa GN=RPL21 PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 5.502e-15 Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 1 Query: 70 GLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTG 240 G R TR +F+RPFRK G +PL+TY+R YK GD VD+K G V KG+PHK YHG+TG Sbjct: 6 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGLPHKCYHGKTG 62
BLAST of DN618151 vs. ExPASy Swiss-Prot
Match: RL21_STAMF (50S ribosomal protein L21e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl21e PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 6.083e-14 Identity = 40/99 (40.40%), Postives = 63/99 (63.64%), Query Frame = 1 Query: 61 AGHGLRSRTRDLFARPFRKKGYIP-LSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSR 354 A G R RTR +F++ R+KG +P LS + YK GD V + VN A+HKGMPH+ YHG+TG + + KR + +G++ +K + +R EH++P++ Sbjct: 4 APRGYRHRTRKVFSKHIREKGAVPPLSLLMIDYKPGDKVHIVVNPAIHKGMPHRRYHGKTGTI--IGKRGKAYIVKITLGDK--EKTLFIRPEHLRPAK 98
BLAST of DN618151 vs. ExPASy Swiss-Prot
Match: RL21_SULAC (50S ribosomal protein L21e OS=Sulfolobus acidocaldarius GN=rpl21e PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.770e-13 Identity = 41/94 (43.62%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 70 GLRSRTRDLFARPFRKKGYIP-LSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQP 348 G RS+TR L + R+KG IP LS + Y G+YV VK+N ++HKGMPH+ YHG+ G V V KR E+ +G++ ++ + VR EH+ P Sbjct: 7 GYRSKTRKLLEKKVREKGAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLV--VGKRGKAYEVKVNIGDK--ERVLIVRPEHLIP 96 The following BLAST results are available for this feature:
BLAST of DN618151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618151 ID=DN618151; Name=DN618151; organism=Citrus sinensis; type=EST; length=436bpback to top |