DN618150
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618150 vs. ExPASy Swiss-Prot
Match: RL21_CAPHI (60S ribosomal protein L21 OS=Capra hircus GN=RPL21 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.322e-34 Identity = 68/138 (49.28%), Postives = 95/138 (68.84%), Query Frame = -1 Query: 215 RKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYD 622 RK G +PL+TY+R Y+ GD VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R K+ND+ K +AK +G + KRQP P+ V G E + PIPY+ Sbjct: 20 RKHGVVPLATYMRIYRKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 157
BLAST of DN618150 vs. ExPASy Swiss-Prot
Match: RL21_RAT (60S ribosomal protein L21 OS=Rattus norvegicus GN=Rpl21 PE=1 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 4.779e-33 Identity = 67/138 (48.55%), Postives = 93/138 (67.39%), Query Frame = -1 Query: 215 RKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYD 622 RK G +PL+TY+R YK GD VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R K+ND+ K +AK +G + QP P+ V G E + PIPY+ Sbjct: 20 RKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLNGQPAPPREAHFVRTNGKEPELLEPIPYE 157
BLAST of DN618150 vs. ExPASy Swiss-Prot
Match: RL21_MOUSE (60S ribosomal protein L21 OS=Mus musculus GN=Rpl21 PE=2 SV=3) HSP 1 Score: 140.584 bits (353), Expect = 6.241e-33 Identity = 67/138 (48.55%), Postives = 93/138 (67.39%), Query Frame = -1 Query: 215 RKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTKRQPKGPKPGFMV--EGATLETVTPIPYD 622 RK G +PL+TY+R YK GD VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R K+ND+ K +AK +G + KR P+ V G E + PIPY+ Sbjct: 20 RKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRHAAPPREAHFVRTNGKEPELLEPIPYE 157
BLAST of DN618150 vs. ExPASy Swiss-Prot
Match: RL21_PYUST (60S ribosomal protein L21 (Fragment) OS=Pyura stolonifera GN=RPL21 PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 4.945e-30 Identity = 64/137 (46.72%), Postives = 94/137 (68.61%), Query Frame = -1 Query: 215 RKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVISTKRQPKGPKPG-FMVEGATLETVTPIPYD 622 R++G IPL+ YL YK GD VD+K +G+V K PHK YHG+TGR++NVT+ A+G+ +NKQV RII KRI+VR+EH++ S+ F R +N+ + +A+ + ++ KRQP+ P+ G F+ A E V PIPY+ Sbjct: 19 RERGAIPLNKYLTVYKKGDIVDIKGDGSVQKVCPHKVYHGKTGRIFNVTQHAVGIIVNKQVRGRIIAKRINVRIEHIKHSKSRISFIQRVHENERKRKEAREKKIRVNLKRQPQQPRTGHFVRSSAEPELVEPIPYE 155
BLAST of DN618150 vs. ExPASy Swiss-Prot
Match: RL21_CAEEL (60S ribosomal protein L21 OS=Caenorhabditis elegans GN=rpl-21 PE=1 SV=3) HSP 1 Score: 129.028 bits (323), Expect = 1.879e-29 Identity = 65/141 (46.10%), Postives = 92/141 (65.25%), Query Frame = -1 Query: 209 RKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGE-VISTKRQPKGPKPGFMV--EGATLETVTPIPYDVV 622 RK G LSTY YK GD VD+K NGA KGMP K YHGRTGR++NVT+ A+G+ +NK+V I+ KRI++R+EH++PS+C +F R K NDE + AK+ G+ V + KR P P+ V + E + P+ +++V Sbjct: 20 RKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGRTGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQPVPALKRLPVAPRGAHTVTTQNNEPELLAPLRFEIV 160
BLAST of DN618150 vs. ExPASy Swiss-Prot
Match: RL21_ENTHI (60S ribosomal protein L21 OS=Entamoeba histolytica GN=RPL21 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 6.045e-28 Identity = 62/145 (42.76%), Postives = 92/145 (63.45%), Query Frame = -1 Query: 215 RKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRK-------KKNDELKADAKARGEVISTKRQPKGPKPGFMVEGATLE--TVTPIPYD 622 R G ST L TYK+GDYV + N ++ G+P+K +HG+TGRVWNV AIGV +NK+V NRI+ KR+H+ EH++PS C ++F RK K+N +LK + K + KR PK P+P +++GA ++ TV P+ ++ Sbjct: 20 RGHGLSNTSTILHTYKVGDYVTILCNSSIQHGLPYKAFHGKTGRVWNVNPHAIGVMVNKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNIQLKKEGKPL-LPLPAKRLPKQPRPAELIKGADIKFTTVAPLKFE 163
BLAST of DN618150 vs. ExPASy Swiss-Prot
Match: RL21_ENCCU (60S ribosomal protein L21 OS=Encephalitozoon cuniculi GN=RPL21 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.256e-25 Identity = 57/118 (48.31%), Postives = 84/118 (71.19%), Query Frame = -1 Query: 272 RKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFKLRKKKNDELKADAKARGEVIS-TKRQPKGPK 622 RK G +S YL Y+IGD VD+ VN A+ KGMPHK+YHGRTGRV++V R++ V + K+V + + K+I VR+EHV+ SRC+EE + R E+ DA++RG V++ +KR+ +GP+ Sbjct: 19 RKHGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVYDVKPRSLNVALYKRVRGKYVIKKIIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVVLAPSKRKIEGPR 136 The following BLAST results are available for this feature:
BLAST of DN618150 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN618150 ID=DN618150; Name=DN618150; organism=Citrus sinensis; type=EST; length=622bpback to top |