DN618149

Overview
NameDN618149
Unique NameDN618149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length503
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_LACRD (Ribose-5-phosphate isomerase A OS=Lactobacillus reuteri (strain DSM 20016) GN=rpiA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.959e-17
Identity = 39/87 (44.83%), Postives = 63/87 (72.41%), Query Frame = 2
Query:  242 LTQDDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            + Q+ LK+    ++V Y+KSGM +GLGTGST  ++VD++G+ ++ G+++DI+G+ TS RT +QA+ L I +  +DD   +DL IDGA
Sbjct:    1 MDQNALKEQTGKESVKYIKSGMIVGLGTGSTVKYMVDELGKQVQEGKIKDIIGVTTSNRTAKQARDLGITIKDIDDVDHIDLTIDGA 87          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_TRIEI (Ribose-5-phosphate isomerase A OS=Trichodesmium erythraeum (strain IMS101) GN=rpiA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.152e-16
Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 2
Query:  257 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            +K+     A + VKSGM +GLGTGST A+++  +G+LL+ GEL+DI GIPTS ++   AK   +PLTTLD+   +D+AIDGA
Sbjct:   11 MKQQVGKAAAEEVKSGMIVGLGTGSTTAYMIQFLGELLQRGELKDIKGIPTSFQSTVLAKKYGVPLTTLDEVDYMDIAIDGA 92          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRA5 (Ribose-5-phosphate isomerase A OS=Streptococcus agalactiae serotype V GN=rpiA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.152e-16
Identity = 45/84 (53.57%), Postives = 60/84 (71.43%), Query Frame = 2
Query:  251 DDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            D+LKKLA   A  YVK+GM +GLGTGSTA F V++IG+ +K   L+ +VG+ TS RT EQA+ L IPL + DD   +D+ +DGA
Sbjct:    2 DELKKLAGVTAAKYVKNGMIVGLGTGSTAYFFVEEIGRRVKEEGLQ-VVGVTTSNRTTEQARGLGIPLKSADDIDVIDVTVDGA 84          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRA3 (Ribose-5-phosphate isomerase A OS=Streptococcus agalactiae serotype III GN=rpiA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.152e-16
Identity = 45/84 (53.57%), Postives = 60/84 (71.43%), Query Frame = 2
Query:  251 DDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            D+LKKLA   A  YVK+GM +GLGTGSTA F V++IG+ +K   L+ +VG+ TS RT EQA+ L IPL + DD   +D+ +DGA
Sbjct:    2 DELKKLAGVTAAKYVKNGMIVGLGTGSTAYFFVEEIGRRVKEEGLQ-VVGVTTSNRTTEQARGLGIPLKSADDIDVIDVTVDGA 84          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_BACCZ (Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ZK / E33L) GN=rpiA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.152e-16
Identity = 45/83 (54.22%), Postives = 58/83 (69.88%), Query Frame = 2
Query:  254 DLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            DLK++A + A  +VK GM +GLGTGSTA + + K+GQ +K G    I  +PTSK TE  A+ LNIPL +L+D  SLDL IDGA
Sbjct:    2 DLKQIAGEYAATFVKDGMKIGLGTGSTAYWTIQKLGQRVKEG--LSIQAVPTSKETEALAQQLNIPLISLNDVQSLDLTIDGA 82          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_BACAN (Ribose-5-phosphate isomerase A OS=Bacillus anthracis GN=rpiA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.152e-16
Identity = 45/83 (54.22%), Postives = 58/83 (69.88%), Query Frame = 2
Query:  254 DLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            DLK++A + A  +VK GM +GLGTGSTA + + K+GQ +K G    I  +PTSK TE  A+ LNIPL +L+D  SLDL IDGA
Sbjct:    2 DLKQIAGEYAATFVKDGMKIGLGTGSTAYWTIQKLGQRVKEG--LSIQAVPTSKETEALAQQLNIPLISLNDVQSLDLTIDGA 82          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_SYNSC (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain CC9605) GN=rpiA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.504e-16
Identity = 44/85 (51.76%), Postives = 59/85 (69.41%), Query Frame = 2
Query:  248 QDDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            Q  +K+  AD AV+ +K GM LGLG+GSTAA ++  +G  L +GEL+DIVG+ TS + E  A  LNIPL +L+    +DLAIDGA
Sbjct:    5 QTQMKQAVADAAVEQIKDGMVLGLGSGSTAALMIQGLGAKLASGELKDIVGVTTSFQGEVLAAELNIPLLSLNAVSRIDLAIDGA 89          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_SYNPX (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain WH8102) GN=rpiA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.504e-16
Identity = 44/85 (51.76%), Postives = 59/85 (69.41%), Query Frame = 2
Query:  248 QDDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            Q  +K+  AD AV+ +K GM LGLG+GSTAA ++  +G  L +GEL+DIVG+ TS + E  A  LNIPL +L+    +DLAIDGA
Sbjct:    5 QTQMKQAVADAAVEQIKDGMVLGLGSGSTAALMIKALGAKLASGELKDIVGVTTSFQGEVLAAELNIPLLSLNAVDRIDLAIDGA 89          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_BACHK (Ribose-5-phosphate isomerase A OS=Bacillus thuringiensis subsp. konkukian GN=rpiA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.504e-16
Identity = 45/83 (54.22%), Postives = 58/83 (69.88%), Query Frame = 2
Query:  254 DLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            DLK++A + A  +VK GM +GLGTGSTA + + K+GQ +K G    I  +PTSK TE  A+ LNIPL +L+D  SLDL IDGA
Sbjct:    2 DLKQIAGEYAATFVKDGMKVGLGTGSTAYWTIQKLGQRVKEG--LSIQAVPTSKETEALAQQLNIPLISLNDVQSLDLTIDGA 82          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRA1 (Ribose-5-phosphate isomerase A OS=Streptococcus agalactiae serotype Ia GN=rpiA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.965e-16
Identity = 45/84 (53.57%), Postives = 60/84 (71.43%), Query Frame = 2
Query:  251 DDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            D+LKKLA   A  YVK+GM +GLGTGSTA F V++IG+ +K   L+ +VG+ TS RT EQA+ L IPL + DD   +D+ +DGA
Sbjct:    2 DELKKLAGVTAAKYVKNGMIVGLGTGSTAYFFVEEIGRRVKEEGLQ-VVGVTTSNRTTEQARGLAIPLKSADDIDVIDVTVDGA 84          
The following BLAST results are available for this feature:
BLAST of DN618149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
RPIA_LACRD3.959e-1744.83Ribose-5-phosphate isomerase A OS=Lactobacillus re... [more]
RPIA_TRIEI1.152e-1651.22Ribose-5-phosphate isomerase A OS=Trichodesmium er... [more]
RPIA_STRA51.152e-1653.57Ribose-5-phosphate isomerase A OS=Streptococcus ag... [more]
RPIA_STRA31.152e-1653.57Ribose-5-phosphate isomerase A OS=Streptococcus ag... [more]
RPIA_BACCZ1.152e-1654.22Ribose-5-phosphate isomerase A OS=Bacillus cereus ... [more]
RPIA_BACAN1.152e-1654.22Ribose-5-phosphate isomerase A OS=Bacillus anthrac... [more]
RPIA_SYNSC1.504e-1651.76Ribose-5-phosphate isomerase A OS=Synechococcus sp... [more]
RPIA_SYNPX1.504e-1651.76Ribose-5-phosphate isomerase A OS=Synechococcus sp... [more]
RPIA_BACHK1.504e-1654.22Ribose-5-phosphate isomerase A OS=Bacillus thuring... [more]
RPIA_STRA11.965e-1653.57Ribose-5-phosphate isomerase A OS=Streptococcus ag... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618149 ID=DN618149; Name=DN618149; organism=Citrus sinensis; type=EST; length=503bp
AGCCAAAGCCATCCAAAACACACACAGATAGATTGATCAACAACAACTTC
TCACAACTCACCTCTCATTTATTTTCCTCTCAAACTCACCCCATCACCAC
CACAGCCTCCGCCCAAGAAAAATGACTTCTTTATCCTTCCTCCCCACTCT
CCATCTCTCCACCTCCGCTCACTTCCTCCCACGCGCCCCCAAATCCCTCA
GACCACGCGCCATTTCCATCAAAGCCCAGGCCGTCCCGGCCCTCACCCAA
GACGACTTGAAGAAGCTCGCCGCCGACAAGGCCGTTGACTACGTCAAATC
CGGCATGGCCCTCGGCCTCGGTACCGGCTCCACCGCCGCCTTCGTCGTCG
ACAAGATCGGCCAACTCTTGAAAACCGGCGAGTTAAGGGACATCGTCGGA
ATCCCAACTTCAAAACGCACGGAAGAGCAAGCCAAGTCGCTTAACATTCC
CTTAACCACACTTGACGATCACCCATCACTGGATTTGGCCATTGACGGCG
CCG
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