DN618149

Overview
NameDN618149
Unique NameDN618149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length503
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_NATPD (Ribose-5-phosphate isomerase A OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpiA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.457e-11
Identity = 39/81 (48.15%), Postives = 57/81 (70.37%), Query Frame = 2
Query:  260 KKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            K+ A  +A D V+ GM +GLGTGSTAA  + ++GQ ++ G   DI GIPTS ++ + A+  +IPLTTL++  + D+AIDGA
Sbjct:   11 KRRAGKQAADAVEDGMVVGLGTGSTAAASIRELGQRVEEG--LDIRGIPTSYQSRQLAREADIPLTTLEE-ATPDVAIDGA 88          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_MARMM (Ribose-5-phosphate isomerase A OS=Maricaulis maris (strain MCS10) GN=rpiA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.903e-11
Identity = 36/81 (44.44%), Postives = 53/81 (65.43%), Query Frame = 2
Query:  260 KKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            K LAA  A+DY++SGM LGLG+GSTA   +  +G+ +K G   D+ G+PTS+RT + A    +PL  +D   ++ + IDGA
Sbjct:    7 KTLAAAAALDYIESGMTLGLGSGSTAEIFLRLLGEKIKDG--LDVRGVPTSQRTAQIAAENGVPLIDVDHVNNIAITIDGA 85          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_METMA (Ribose-5-phosphate isomerase A OS=Methanosarcina mazei GN=rpiA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.486e-11
Identity = 39/86 (45.35%), Postives = 52/86 (60.47%), Query Frame = 2
Query:  245 TQDDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            T    K+ A   A   V SGM +GLGTGST A+ + ++G+ +K   L DI+G+ TS ++E  A    I LTTL   P LD+AIDGA
Sbjct:    8 TDSPEKRAAGIAAAGLVSSGMVVGLGTGSTVAYTIKELGRRVKEEGL-DILGVVTSYQSEMLAIDAGIRLTTLSQDPELDIAIDGA 92          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_BARQU (Ribose-5-phosphate isomerase A OS=Bartonella quintana GN=rpiA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.486e-11
Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 2
Query:  257 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            LKK AA KA+++V+  M LG+GTGSTA   +  +G+ +  G LR + G+ TS+ +E+  +   +P+TTL+  P LDL IDGA
Sbjct:    6 LKKRAAAKALEFVQDDMRLGIGTGSTANEFIRLLGERVADG-LR-VTGVATSQYSEQLCRKFGVPVTTLEQMPELDLDIDGA 85          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_AGRRK (Ribose-5-phosphate isomerase A OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=rpiA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.486e-11
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 2
Query:  257 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            +K  AA  A+ YV+SGM LG+GTGSTA   V  + + +  G +  I G+PTS+RT      L +PL +LD+ P LDL IDGA
Sbjct:    6 MKIEAARAALAYVESGMRLGVGTGSTAEEFVRLLAEKVAAGLV--IEGVPTSERTARLCVDLGVPLKSLDELPELDLTIDGA 85          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_RHIEC (Ribose-5-phosphate isomerase A OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=rpiA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.246e-11
Identity = 36/83 (43.37%), Postives = 54/83 (65.06%), Query Frame = 2
Query:  254 DLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            ++K  AA+ A+ +V+SGM LG+GTGSTA   V  + + +  G    + G+PTS+RT      L +PL +LD+ P+LDL +DGA
Sbjct:    5 EMKIKAAEAALAHVESGMRLGIGTGSTAEEFVRLLAEKVAGGF--QVEGVPTSERTARLCVELGVPLKSLDELPALDLTVDGA 85          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_CAEEL (Probable-ribose 5-phosphate isomerase OS=Caenorhabditis elegans GN=rpia-1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.246e-11
Identity = 31/71 (43.66%), Postives = 48/71 (67.61%), Query Frame = 2
Query:  290 YVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            YV+SG  LG+G+GST  ++V+ + Q  + G L+DI+ +PTS  T++      +P++ LD HP LD+ IDGA
Sbjct:   29 YVQSGCRLGVGSGSTVKYLVEYLKQGFQNGSLKDIICVPTSFLTKQWLIESGLPVSDLDSHPELDVCIDGA 99          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_AGRVS (Ribose-5-phosphate isomerase A OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=rpiA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.246e-11
Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 2
Query:  257 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            +K  AA+ A+ YV++GM LG+GTGSTA   V  + + +  G    + G+PTS+RT      L +PL +LD+ P LDL +DGA
Sbjct:    6 MKIKAAELALSYVENGMRLGIGTGSTAEEFVRLLAEKVADGF--KVQGVPTSERTARLCLELGVPLMSLDELPELDLTVDGA 85          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA1_OCEIH (Ribose-5-phosphate isomerase A 1 OS=Oceanobacillus iheyensis GN=rpiA1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.246e-11
Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 2
Query:  248 QDDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            QD LKK   +KA   VK GM +GLG+GST  +++  +G+ ++   L+ I GIP+S +T   A+   IPLT   +   LD+ IDGA
Sbjct:    4 QDKLKKAVGEKAATMVKDGMKVGLGSGSTVYWMIRSLGERIQQDGLK-IEGIPSSNQTATWAEEAGIPLTDFSNVKELDITIDGA 87          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRSY (Ribose-5-phosphate isomerase A OS=Streptococcus suis (strain 05ZYH33) GN=rpiA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.240e-11
Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = 2
Query:  254 DLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            +LK+    KA ++V  GM +GLGTGSTA + V +IG+ +    L+ I G+ TS  T E A SL IPL  +D+   +DL +DGA
Sbjct:    3 NLKEQVGIKAAEFVTDGMIVGLGTGSTAYYFVQEIGRRVAEEGLQ-ITGVTTSHATAEHAASLGIPLKNIDEVEYVDLTVDGA 84          
The following BLAST results are available for this feature:
BLAST of DN618149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
RPIA_NATPD1.457e-1148.15Ribose-5-phosphate isomerase A OS=Natronomonas pha... [more]
RPIA_MARMM1.903e-1144.44Ribose-5-phosphate isomerase A OS=Maricaulis maris... [more]
RPIA_METMA2.486e-1145.35Ribose-5-phosphate isomerase A OS=Methanosarcina m... [more]
RPIA_BARQU2.486e-1145.12Ribose-5-phosphate isomerase A OS=Bartonella quint... [more]
RPIA_AGRRK2.486e-1147.56Ribose-5-phosphate isomerase A OS=Agrobacterium ra... [more]
RPIA_RHIEC3.246e-1143.37Ribose-5-phosphate isomerase A OS=Rhizobium etli (... [more]
RPIA_CAEEL3.246e-1143.66Probable-ribose 5-phosphate isomerase OS=Caenorhab... [more]
RPIA_AGRVS3.246e-1143.90Ribose-5-phosphate isomerase A OS=Agrobacterium vi... [more]
RPIA1_OCEIH3.246e-1142.35Ribose-5-phosphate isomerase A 1 OS=Oceanobacillus... [more]
RPIA_STRSY4.240e-1144.58Ribose-5-phosphate isomerase A OS=Streptococcus su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618149 ID=DN618149; Name=DN618149; organism=Citrus sinensis; type=EST; length=503bp
AGCCAAAGCCATCCAAAACACACACAGATAGATTGATCAACAACAACTTC
TCACAACTCACCTCTCATTTATTTTCCTCTCAAACTCACCCCATCACCAC
CACAGCCTCCGCCCAAGAAAAATGACTTCTTTATCCTTCCTCCCCACTCT
CCATCTCTCCACCTCCGCTCACTTCCTCCCACGCGCCCCCAAATCCCTCA
GACCACGCGCCATTTCCATCAAAGCCCAGGCCGTCCCGGCCCTCACCCAA
GACGACTTGAAGAAGCTCGCCGCCGACAAGGCCGTTGACTACGTCAAATC
CGGCATGGCCCTCGGCCTCGGTACCGGCTCCACCGCCGCCTTCGTCGTCG
ACAAGATCGGCCAACTCTTGAAAACCGGCGAGTTAAGGGACATCGTCGGA
ATCCCAACTTCAAAACGCACGGAAGAGCAAGCCAAGTCGCTTAACATTCC
CTTAACCACACTTGACGATCACCCATCACTGGATTTGGCCATTGACGGCG
CCG
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