DN618149

Overview
NameDN618149
Unique NameDN618149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length503
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRPG (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=rpiA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.078e-14
Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 2
Query:  257 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            LKK+A   A  YV  GM +GLGTGSTA + V++IG+ +K   L+ +VG+ TS  T +QA+ L IPL ++DD  S+DL +DGA
Sbjct:    4 LKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQ-VVGVTTSSVTSKQAEGLGIPLKSIDDIDSIDLTVDGA 84          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRPF (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=rpiA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.078e-14
Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 2
Query:  257 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            LKK+A   A  YV  GM +GLGTGSTA + V++IG+ +K   L+ +VG+ TS  T +QA+ L IPL ++DD  S+DL +DGA
Sbjct:    4 LKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQ-VVGVTTSSVTSKQAEGLGIPLKSIDDIDSIDLTVDGA 84          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRPD (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=rpiA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.078e-14
Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 2
Query:  257 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            LKK+A   A  YV  GM +GLGTGSTA + V++IG+ +K   L+ +VG+ TS  T +QA+ L IPL ++DD  S+DL +DGA
Sbjct:    4 LKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQ-VVGVTTSSVTSKQAEGLGIPLKSIDDIDSIDLTVDGA 84          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRPC (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=rpiA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.078e-14
Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 2
Query:  257 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            LKK+A   A  YV  GM +GLGTGSTA + V++IG+ +K   L+ +VG+ TS  T +QA+ L IPL ++DD  S+DL +DGA
Sbjct:    4 LKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQ-VVGVTTSSVTSKQAEGLGIPLKSIDDIDSIDLTVDGA 84          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRPB (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=rpiA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.078e-14
Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 2
Query:  257 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            LKK+A   A  YV  GM +GLGTGSTA + V++IG+ +K   L+ +VG+ TS  T +QA+ L IPL ++DD  S+DL +DGA
Sbjct:    4 LKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQ-VVGVTTSSVTSKQAEGLGIPLKSIDDIDSIDLTVDGA 84          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRP6 (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M6 GN=rpiA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.078e-14
Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 2
Query:  257 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            LKK+A   A  YV  GM +GLGTGSTA + V++IG+ +K   L+ +VG+ TS  T +QA+ L IPL ++DD  S+DL +DGA
Sbjct:    4 LKKIAGVTAAQYVTDGMTIGLGTGSTAYYFVEEIGRRVKQEGLQ-VVGVTTSSVTSKQAEGLGIPLKSIDDIDSIDLTVDGA 84          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_GLUOX (Ribose-5-phosphate isomerase A OS=Gluconobacter oxydans GN=rpiA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.078e-14
Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 2
Query:  260 KKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            K+ AA +A D VKSGM +GLGTGSTAA++++++G+  +  E  +I GIPTS  +E++A    IPLT    H  +D+AIDGA
Sbjct:   10 KRTAAREAADMVKSGMVVGLGTGSTAAYMIERLGE--RVAEGLEIFGIPTSDDSEDKALKAGIPLTDFSAHRRIDIAIDGA 88          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_BACCR (Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rpiA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.078e-14
Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 2
Query:  254 DLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            +LK+LA + A ++V  GM +GLGTGST  + + K+G+ +K G       +PTSK TE  A+ LNIPL +L+D  SLDL IDGA
Sbjct:    2 NLKQLAGEYAANFVNDGMKIGLGTGSTVYWTIQKLGERVKEG--LSFQAVPTSKETEALAQQLNIPLISLNDVQSLDLTIDGA 82          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_SYNR3 (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain RCC307) GN=rpiA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.408e-14
Identity = 42/85 (49.41%), Postives = 56/85 (65.88%), Query Frame = 2
Query:  248 QDDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            Q  +K+  A  A D VK+GM LGLG+GSTAA ++ ++G  L+ G L DIVG+ TS + E  A  L IPL +L+    +DLAIDGA
Sbjct:    5 QTQMKQAVALAATDQVKNGMVLGLGSGSTAALMIQEVGARLRDGRLTDIVGVTTSFQGEVLAAELGIPLQSLNAIDRIDLAIDGA 89          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRMU (Ribose-5-phosphate isomerase A OS=Streptococcus mutans GN=rpiA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.408e-14
Identity = 37/84 (44.05%), Postives = 62/84 (73.81%), Query Frame = 2
Query:  251 DDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            ++LKK+A  +A  YV+ GM +GLGTGSTA + V+++G+ ++   L+ ++G+ TS RT  QA++L IPL ++D+  S+D+ +DGA
Sbjct:    2 EELKKIAGVRAAQYVEDGMIVGLGTGSTAYYFVEEVGRRVQEEGLQ-VIGVTTSSRTTAQAQALGIPLKSIDEVDSVDVTVDGA 84          
The following BLAST results are available for this feature:
BLAST of DN618149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
RPIA_STRPG1.078e-1450.00Ribose-5-phosphate isomerase A OS=Streptococcus py... [more]
RPIA_STRPF1.078e-1450.00Ribose-5-phosphate isomerase A OS=Streptococcus py... [more]
RPIA_STRPD1.078e-1450.00Ribose-5-phosphate isomerase A OS=Streptococcus py... [more]
RPIA_STRPC1.078e-1450.00Ribose-5-phosphate isomerase A OS=Streptococcus py... [more]
RPIA_STRPB1.078e-1450.00Ribose-5-phosphate isomerase A OS=Streptococcus py... [more]
RPIA_STRP61.078e-1450.00Ribose-5-phosphate isomerase A OS=Streptococcus py... [more]
RPIA_GLUOX1.078e-1449.38Ribose-5-phosphate isomerase A OS=Gluconobacter ox... [more]
RPIA_BACCR1.078e-1449.40Ribose-5-phosphate isomerase A OS=Bacillus cereus ... [more]
RPIA_SYNR31.408e-1449.41Ribose-5-phosphate isomerase A OS=Synechococcus sp... [more]
RPIA_STRMU1.408e-1444.05Ribose-5-phosphate isomerase A OS=Streptococcus mu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618149 ID=DN618149; Name=DN618149; organism=Citrus sinensis; type=EST; length=503bp
AGCCAAAGCCATCCAAAACACACACAGATAGATTGATCAACAACAACTTC
TCACAACTCACCTCTCATTTATTTTCCTCTCAAACTCACCCCATCACCAC
CACAGCCTCCGCCCAAGAAAAATGACTTCTTTATCCTTCCTCCCCACTCT
CCATCTCTCCACCTCCGCTCACTTCCTCCCACGCGCCCCCAAATCCCTCA
GACCACGCGCCATTTCCATCAAAGCCCAGGCCGTCCCGGCCCTCACCCAA
GACGACTTGAAGAAGCTCGCCGCCGACAAGGCCGTTGACTACGTCAAATC
CGGCATGGCCCTCGGCCTCGGTACCGGCTCCACCGCCGCCTTCGTCGTCG
ACAAGATCGGCCAACTCTTGAAAACCGGCGAGTTAAGGGACATCGTCGGA
ATCCCAACTTCAAAACGCACGGAAGAGCAAGCCAAGTCGCTTAACATTCC
CTTAACCACACTTGACGATCACCCATCACTGGATTTGGCCATTGACGGCG
CCG
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