DN618149

Overview
NameDN618149
Unique NameDN618149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length503
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_GLOVI (Ribose-5-phosphate isomerase A OS=Gloeobacter violaceus GN=rpiA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.127e-14
Identity = 44/84 (52.38%), Postives = 59/84 (70.24%), Query Frame = 2
Query:  251 DDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            D LK+ AA +AV+ V+ GM +GLGTGSTAAF V  + + ++ G LR +VGIPTS+RT  QA++  I L TL +   +DL IDGA
Sbjct:    4 DILKQTAARRAVELVEDGMVVGLGTGSTAAFAVSVLAERVRLG-LR-VVGIPTSERTARQAEAEGIVLGTLAEQSRVDLTIDGA 85          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_CYAP8 (Ribose-5-phosphate isomerase A OS=Cyanothece sp. (strain PCC 8801) GN=rpiA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.127e-14
Identity = 39/82 (47.56%), Postives = 55/82 (67.07%), Query Frame = 2
Query:  257 LKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            +K+     A   VKS   +GLGTGST A+ ++ IG+ LK+G+L++IVG+ TS + E  A+   IPLTTLD    +D+AIDGA
Sbjct:   11 MKQEVGKAAASRVKSDSIVGLGTGSTTAYAIEYIGERLKSGDLKNIVGVTTSFQAEVLARKYGIPLTTLDVIDRIDVAIDGA 92          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_BRAJA (Ribose-5-phosphate isomerase A OS=Bradyrhizobium japonicum GN=rpiA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.192e-13
Identity = 38/87 (43.68%), Postives = 56/87 (64.37%), Query Frame = 2
Query:  242 LTQDDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            +  D LK+ AA +A++ V+ GM LGLGTGSTA   V+ +G+ +  G    ++G+PTS+ T   A    +PLTTLD+   LD+ +DGA
Sbjct:    1 MNMDQLKRQAAARALEEVRDGMQLGLGTGSTAKHFVELLGERVAAG--LKVIGVPTSEATRLDATRCGVPLTTLDEIDHLDITVDGA 85          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_SILST (Ribose-5-phosphate isomerase A OS=Silicibacter sp. (strain TM1040) GN=rpiA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.557e-13
Identity = 41/84 (48.81%), Postives = 58/84 (69.05%), Query Frame = 2
Query:  251 DDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            D  K +AA +A + V+ GM +GLGTGSTAA++V  +G++++   L+ I G+PTS RT E A+ + I L TLD+   LDL IDGA
Sbjct:    9 DKAKFVAAKRAAELVEDGMRVGLGTGSTAAWLVRCLGEMVREDGLK-ITGVPTSARTAELAREVGIELITLDEARWLDLTIDGA 91          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_RHOSK (Ribose-5-phosphate isomerase A OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=rpiA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.557e-13
Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 2
Query:  251 DDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            D  K  AA +AVD V+ GM LGLGTGSTAA++V  + + ++   LR + G+PTS RT E A++L I + TLD+   LDL IDGA
Sbjct:    9 DTAKFAAARRAVDLVQDGMKLGLGTGSTAAWMVRCLAERVREEGLR-VQGVPTSTRTAELARALGIQVVTLDEAKWLDLTIDGA 91          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_RHOS4 (Ribose-5-phosphate isomerase A OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rpiA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.557e-13
Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 2
Query:  251 DDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            D  K  AA +AVD V+ GM LGLGTGSTAA++V  + + ++   LR + G+PTS RT E A++L I + TLD+   LDL IDGA
Sbjct:    9 DTAKFAAARRAVDLVQDGMKLGLGTGSTAAWMVRCLAERVREEGLR-VQGVPTSTRTAELARALGIQVVTLDEAKWLDLTIDGA 91          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_RHOS1 (Ribose-5-phosphate isomerase A OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=rpiA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.557e-13
Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 2
Query:  251 DDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            D  K  AA +AVD V+ GM LGLGTGSTAA++V  + + ++   LR + G+PTS RT E A++L I + TLD+   LDL IDGA
Sbjct:    9 DTAKFAAARRAVDLVQDGMKLGLGTGSTAAWMVRCLAERVREEGLR-VQGVPTSTRTAELARALGIQVVTLDEAKWLDLTIDGA 91          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_RHOP5 (Ribose-5-phosphate isomerase A OS=Rhodopseudomonas palustris (strain BisA53) GN=rpiA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.557e-13
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 2
Query:  242 LTQDDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            ++ D+LK+ AA  A++ V+ GM LGLGTGSTA   V+ +G  ++ G    +VG+PTS+ T   A+   IPL TLD+   LDL +DGA
Sbjct:    1 MSSDELKRQAAAVALEQVRDGMKLGLGTGSTAKHFVELLGAKVQGG--LQVVGVPTSEVTRADAERCGIPLATLDEVDHLDLTVDGA 85          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_METPB (Ribose-5-phosphate isomerase A OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rpiA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.557e-13
Identity = 38/87 (43.68%), Postives = 57/87 (65.52%), Query Frame = 2
Query:  242 LTQDDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            ++  DLK+ AA++A+  V+ GM LG+GTGSTAA  +  +G+ ++ G    + G+PTS+ T    +   IPL TL++ P LDL IDGA
Sbjct:    1 MSAPDLKRAAAERAIPLVEDGMRLGIGTGSTAAAFIALLGERVRAG--LTVTGVPTSEATRIACEREGIPLATLEELPELDLTIDGA 85          
BLAST of DN618149 vs. ExPASy Swiss-Prot
Match: RPIA_STRPI (Ribose-5-phosphate isomerase A OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=rpiA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.033e-13
Identity = 38/84 (45.24%), Postives = 58/84 (69.05%), Query Frame = 2
Query:  251 DDLKKLAADKAVDYVKSGMALGLGTGSTAAFVVDKIGQLLKTGELRDIVGIPTSKRTEEQAKSLNIPLTTLDDHPSLDLAIDGA 502
            ++LKK+A  KA ++V  GM +GLGTGSTA + V++IG+ +K   L+ I  + TS  T +QA+ LNIPL ++D    +D+ +DGA
Sbjct:    2 ENLKKMAGIKAAEFVSDGMVVGLGTGSTAYYFVEEIGRRIKEEGLQ-ITAVTTSSVTSKQAEGLNIPLKSIDQVDFVDVTVDGA 84          
The following BLAST results are available for this feature:
BLAST of DN618149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
RPIA_GLOVI9.127e-1452.38Ribose-5-phosphate isomerase A OS=Gloeobacter viol... [more]
RPIA_CYAP89.127e-1447.56Ribose-5-phosphate isomerase A OS=Cyanothece sp. (... [more]
RPIA_BRAJA1.192e-1343.68Ribose-5-phosphate isomerase A OS=Bradyrhizobium j... [more]
RPIA_SILST1.557e-1348.81Ribose-5-phosphate isomerase A OS=Silicibacter sp.... [more]
RPIA_RHOSK1.557e-1351.19Ribose-5-phosphate isomerase A OS=Rhodobacter spha... [more]
RPIA_RHOS41.557e-1351.19Ribose-5-phosphate isomerase A OS=Rhodobacter spha... [more]
RPIA_RHOS11.557e-1351.19Ribose-5-phosphate isomerase A OS=Rhodobacter spha... [more]
RPIA_RHOP51.557e-1345.98Ribose-5-phosphate isomerase A OS=Rhodopseudomonas... [more]
RPIA_METPB1.557e-1343.68Ribose-5-phosphate isomerase A OS=Methylobacterium... [more]
RPIA_STRPI2.033e-1345.24Ribose-5-phosphate isomerase A OS=Streptococcus pn... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618149 ID=DN618149; Name=DN618149; organism=Citrus sinensis; type=EST; length=503bp
AGCCAAAGCCATCCAAAACACACACAGATAGATTGATCAACAACAACTTC
TCACAACTCACCTCTCATTTATTTTCCTCTCAAACTCACCCCATCACCAC
CACAGCCTCCGCCCAAGAAAAATGACTTCTTTATCCTTCCTCCCCACTCT
CCATCTCTCCACCTCCGCTCACTTCCTCCCACGCGCCCCCAAATCCCTCA
GACCACGCGCCATTTCCATCAAAGCCCAGGCCGTCCCGGCCCTCACCCAA
GACGACTTGAAGAAGCTCGCCGCCGACAAGGCCGTTGACTACGTCAAATC
CGGCATGGCCCTCGGCCTCGGTACCGGCTCCACCGCCGCCTTCGTCGTCG
ACAAGATCGGCCAACTCTTGAAAACCGGCGAGTTAAGGGACATCGTCGGA
ATCCCAACTTCAAAACGCACGGAAGAGCAAGCCAAGTCGCTTAACATTCC
CTTAACCACACTTGACGATCACCCATCACTGGATTTGGCCATTGACGGCG
CCG
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