DN618148

Overview
NameDN618148
Unique NameDN618148
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618148 vs. ExPASy Swiss-Prot
Match: RPIA_STRSV (Ribose-5-phosphate isomerase A OS=Streptococcus sanguinis (strain SK36) GN=rpiA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.399e-19
Identity = 61/141 (43.26%), Postives = 83/141 (58.87%), Query Frame = -3
Query:  214 DPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 636
            D   N +KG GGALL EK+V   +K ++ V DESK+V  LG  KL  PVEVVQ    Y   +L   F   G +   RE ++ + ++TD  N+IIDL     I++ V    E+  + GVVEHGLF  M   VI+AGK+G++V
Sbjct:   88 DSAFNGIKGGGGALLMEKVVAVPTKHYIWVVDESKMVEKLGAFKL--PVEVVQ----YGAEQLFRRFERAGYKPAFREKDDQR-FVTDMQNFIIDLDLGV-IENSVEFAQELDHVVGVVEHGLFNQMVDKVIVAGKSGLQV 220          
BLAST of DN618148 vs. ExPASy Swiss-Prot
Match: RPIA_STAAW (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain MW2) GN=rpiA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.399e-19
Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = -3
Query:  205 DPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 636
            DP LN++KG GGAL REK+++  +  FVVV DE+K+V  L G    +PVEV +F W Y+++R  + + ++  E ++ E      +ITDN NYI+D      I D       +  L GV E G FLDMA  VI+  + GV++  K
Sbjct:   91 DPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYL-GETFKLPVEVDKFNW-YHILRKIESYADIKVERRVNE---DVAFITDNGNYILDCKLPKGI-DPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK 228          
BLAST of DN618148 vs. ExPASy Swiss-Prot
Match: RPIA_STAAS (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain MSSA476) GN=rpiA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.399e-19
Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = -3
Query:  205 DPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 636
            DP LN++KG GGAL REK+++  +  FVVV DE+K+V  L G    +PVEV +F W Y+++R  + + ++  E ++ E      +ITDN NYI+D      I D       +  L GV E G FLDMA  VI+  + GV++  K
Sbjct:   91 DPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYL-GETFKLPVEVDKFNW-YHILRKIESYADIKVERRVNE---DVAFITDNGNYILDCKLPKGI-DPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK 228          
BLAST of DN618148 vs. ExPASy Swiss-Prot
Match: RPIA_STAAR (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain MRSA252) GN=rpiA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.399e-19
Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = -3
Query:  205 DPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 636
            DP LN++KG GGAL REK+++  +  FVVV DE+K+V  L G    +PVEV +F W Y+++R  + + ++  E ++ E      +ITDN NYI+D      I D       +  L GV E G FLDMA  VI+  + GV++  K
Sbjct:   91 DPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKMVQYL-GETFKLPVEVDKFNW-YHILRKIESYADIKVERRVNE---DVAFITDNGNYILDCKLPKGI-DPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK 228          
BLAST of DN618148 vs. ExPASy Swiss-Prot
Match: RPIA_STAAN (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain N315) GN=rpiA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.399e-19
Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = -3
Query:  205 DPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 636
            DP LN++KG GGAL REK+++  +  FVVV DE+K+V  L G    +PVEV +F W Y+++R  + + ++  E ++ E      +ITDN NYI+D      I D       +  L GV E G FLDMA  VI+  + GV++  K
Sbjct:   91 DPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYL-GETFKLPVEVDKFNW-YHILRKIESYADIKVERRVNE---DVAFITDNGNYILDCKLPKGI-DPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK 228          
BLAST of DN618148 vs. ExPASy Swiss-Prot
Match: RPIA_STAAM (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rpiA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.399e-19
Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = -3
Query:  205 DPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 636
            DP LN++KG GGAL REK+++  +  FVVV DE+K+V  L G    +PVEV +F W Y+++R  + + ++  E ++ E      +ITDN NYI+D      I D       +  L GV E G FLDMA  VI+  + GV++  K
Sbjct:   91 DPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYL-GETFKLPVEVDKFNW-YHILRKIESYADIKVERRVNE---DVAFITDNGNYILDCKLPKGI-DPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK 228          
BLAST of DN618148 vs. ExPASy Swiss-Prot
Match: RPIA_SPHAL (Ribose-5-phosphate isomerase A OS=Sphingopyxis alaskensis GN=rpiA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.399e-19
Identity = 61/145 (42.07%), Postives = 83/145 (57.24%), Query Frame = -3
Query:  205 DPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYF-ETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 636
            D     +KG GGALLREK+ E+AS   +++AD SKLV+ LG  K  +PVEVV F  ++   RL      LG    +RE   G P++TD  NYI+D    E P    ++A   I  + GV+EHGLFLD    ++IA    VEV+ +
Sbjct:   90 DDRFQAIKGGGGALLREKITESASTRVIIIADSSKLVAQLG--KFPLPVEVVPFATEFVRARLS----ALGARVTVREA-GGTPFLTDQGNYILDAALDEIPRPREIAAA--ITTIPGVLEHGLFLDEIDTIMIARGDMVEVRHR 225          
BLAST of DN618148 vs. ExPASy Swiss-Prot
Match: RPIA_BRAJA (Ribose-5-phosphate isomerase A OS=Bradyrhizobium japonicum GN=rpiA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.399e-19
Identity = 56/147 (38.10%), Postives = 86/147 (58.50%), Query Frame = -3
Query:  214 DPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEA-----KLREGE-NGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 636
            DPELNL+KG GGALLREK+V AAS   +V+AD++K V  LG  +  +P+EV+ F        ++  F + G        K + G+ +G  ++TD  ++I+D      I D  S    +  + GVVEHGLF+ +A++ ++AG  G+ V
Sbjct:   89 DPELNLIKGGGGALLREKIVAAASDRMIVIADDTKWVPTLG--RFPLPIEVIPFGLGATRRAIETAFAQCGVSGQMAVRKAKGGDKDGHVFVTDGGHWILDAQLGR-IVDPPSLAKALSAIPGVVEHGLFIGLASSAVLAGGEGIRV 232          
BLAST of DN618148 vs. ExPASy Swiss-Prot
Match: RPIA_STAAC (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain COL) GN=rpiA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.052e-19
Identity = 58/144 (40.28%), Postives = 83/144 (57.64%), Query Frame = -3
Query:  205 DPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 636
            DP LN++KG GGAL REK+++  +  FVVV DE+K+V  L G    +PVEV +F W Y ++R  + + ++  E ++ E      +ITDN NYI+D      I D       +  L GV E G FLDMA  VI+  + GV++  K
Sbjct:   91 DPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYL-GETFKLPVEVDKFNW-YQILRKIESYADIKVERRVNE---DVAFITDNGNYILDCKLPKGI-DPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK 228          
BLAST of DN618148 vs. ExPASy Swiss-Prot
Match: RPIA_KORCO (Ribose-5-phosphate isomerase A OS=Korarchaeum cryptofilum (strain OPF8) GN=rpiA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.210e-19
Identity = 58/141 (41.13%), Postives = 91/141 (64.54%), Query Frame = -3
Query:  214 DPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKYNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 636
            D  LNL+KG GGALLREK++   S ++V++AD +KLV  L  SK A+PVEV+ +   +    L +L +   C+A++R  ++  P+ITDN N I+D+    P++D  S  +E+  + GVVE G+F+ +A  V+IA  + V+V
Sbjct:   86 DSNLNLLKGGGGALLREKVLAYNSSTYVIIADHTKLVEKL-CSKRALPVEVLPYGVSWT---LGNLIKRFNCDARIRI-KDLSPFITDNGNVIVDINC-PPLEDPASMESEVKGVPGVVEVGIFVGLADLVLIARGSEVKV 220          
The following BLAST results are available for this feature:
BLAST of DN618148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
RPIA_STRSV5.399e-1943.26Ribose-5-phosphate isomerase A OS=Streptococcus sa... [more]
RPIA_STAAW5.399e-1940.28Ribose-5-phosphate isomerase A OS=Staphylococcus a... [more]
RPIA_STAAS5.399e-1940.28Ribose-5-phosphate isomerase A OS=Staphylococcus a... [more]
RPIA_STAAR5.399e-1940.28Ribose-5-phosphate isomerase A OS=Staphylococcus a... [more]
RPIA_STAAN5.399e-1940.28Ribose-5-phosphate isomerase A OS=Staphylococcus a... [more]
RPIA_STAAM5.399e-1940.28Ribose-5-phosphate isomerase A OS=Staphylococcus a... [more]
RPIA_SPHAL5.399e-1942.07Ribose-5-phosphate isomerase A OS=Sphingopyxis ala... [more]
RPIA_BRAJA5.399e-1938.10Ribose-5-phosphate isomerase A OS=Bradyrhizobium j... [more]
RPIA_STAAC7.052e-1940.28Ribose-5-phosphate isomerase A OS=Staphylococcus a... [more]
RPIA_KORCO9.210e-1941.13Ribose-5-phosphate isomerase A OS=Korarchaeum cryp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C20_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618148 ID=DN618148; Name=DN618148; organism=Citrus sinensis; type=EST; length=638bp
TTTTTCGAGCAACGGAACAATTTATTTATGTTTTATTCCACATCTGCCCA
ATTCAAGATACAAAATTTCTACTGAGAACCCGCATTGCCAAATCTAACAT
TTAAACTAAAATTAAGTCCAAAAAAAAATATCAGAGTAATGAACAACAAG
AAGAAGGACAAATTATAAAAAACCAAATTTTTTAAATCCTCACCGCCATC
ATCACTTGCTCTTAACTTCAACACCAGTCTTCCCAGCTATGATCACAGCA
GTCGCCATATCCAAAAACAACCCGTGTTCCACAACTCCTTCGAGCTTCCC
AATCTCCGTCCCAGCTGAAACCCCGTCTTTAATGGGCGTCTCGAAATACA
AATCGATAATGTAGTTAAAATTATCAGTGATATAAGGCTTCCCGTTTTCC
CCTTCTCTAAGCTTGGCCTCACAACCCAGTTCCCTGAACAAGTCTTGAAG
CCTAACCAAATTGTATTTCCAGCAAAACTGAACCACTTCAACTGGCATCG
CAAGCTTACTCCCACCGAGTCCGCTCACTAATTTACTCTCATCAGCCACA
ACAACGAAGCTTTTCGACGCAGCTTCCACCATCTTCTCTCTCAAAAGCGC
CCCGCCTCGGCCTTTAACGAGGTTCAATTCTGGGTCAA
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