DN618143

Overview
NameDN618143
Unique NameDN618143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: YY06_CAEEL (Putative serine/threonine-protein phosphatase C27B7.6 OS=Caenorhabditis elegans GN=C27B7.6 PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 1.656e-13
Identity = 44/111 (39.64%), Postives = 59/111 (53.15%), Query Frame = 2
Query:  194 IHRLTEVRFARPGKQVQL---SESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            +H L     AR  K   L   S+S+I ++    ++I    P L+E+ AP+ + GD+HGQ  DLL+     G PP   YLFLGDYVDRG  SLE    L   KI + +   L
Sbjct:   11 VHELCRQMIARIEKYGTLEGFSDSDILEVLKTIKEILEPLPCLIEIIAPVVVFGDIHGQLGDLLQFTNEVGRPPDFQYLFLGDYVDRGPNSLEVTVWLFCMKILFSKKVHL 121          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PPT1_YEAST (Serine/threonine-protein phosphatase T OS=Saccharomyces cerevisiae GN=PPT1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.817e-13
Identity = 37/83 (44.58%), Postives = 51/83 (61.45%), Query Frame = 2
Query:  290 IFMRQPNLLELE------APMKICGDVHGQYSDLLRLF-EYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            +F ++P+++ELE        + +CGD HGQ+ D+L LF ++G   PK  YLF GD+VDRG  S E   L    KI +P NFFL
Sbjct:  224 LFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFL 306          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PPP5_SOLLC (Serine/threonine-protein phosphatase 5 OS=Solanum lycopersicum GN=PP5 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 8.217e-13
Identity = 40/99 (40.40%), Postives = 56/99 (56.57%), Query Frame = 2
Query:  236 QVQLSESEIKQLCVASRDIFMRQPNLLELEAP----MKICGDVHGQYSDLLRLFEYGGYPPKAN-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            Q  L +    Q+ + +R++    P+L+++  P      +CGDVHGQ+ DLL +FE  G P + N YLF GD+VDRG  SLE I  L A+K   P    L
Sbjct:  259 QKNLHKRYAYQIVLQTREMLRALPSLVDIVVPEGKHFTVCGDVHGQFYDLLNIFELNGLPSEDNPYLFNGDFVDRGSFSLEVILTLFAFKCMCPSAIHL 357          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PPP5_RAT (Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus GN=Ppp5c PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.391e-12
Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 2
Query:  266 QLCVASRDIFMRQPNLLELEAP----MKICGDVHGQYSDLLRLFEYGGYPPKAN-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            Q+ V  +++  +   L+E        + +CGD HGQ+ DLL +FE  G P + N Y+F GD+VDRG  S+E I  L  +K+ YP++F L
Sbjct:  211 QILVQVKEVLCKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHL 299          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PPP5_MOUSE (Serine/threonine-protein phosphatase 5 OS=Mus musculus GN=Ppp5c PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 2.391e-12
Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 2
Query:  266 QLCVASRDIFMRQPNLLELEAP----MKICGDVHGQYSDLLRLFEYGGYPPKAN-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            Q+ V  +++  +   L+E        + +CGD HGQ+ DLL +FE  G P + N Y+F GD+VDRG  S+E I  L  +K+ YP++F L
Sbjct:  211 QILVQVKEVLCKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHL 299          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PPP5_HUMAN (Serine/threonine-protein phosphatase 5 OS=Homo sapiens GN=PPP5C PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.391e-12
Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 2
Query:  266 QLCVASRDIFMRQPNLLELEAP----MKICGDVHGQYSDLLRLFEYGGYPPKAN-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            Q+ V  +++  +   L+E        + +CGD HGQ+ DLL +FE  G P + N Y+F GD+VDRG  S+E I  L  +K+ YP++F L
Sbjct:  211 QILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHL 299          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PPT1_SCHPO (Serine/threonine-protein phosphatase T OS=Schizosaccharomyces pombe GN=ppt1 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 5.326e-12
Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = 2
Query:  284 RDIFMRQPNLLEL----EAPMKICGDVHGQYSDLLRLFEYGGYPPKAN-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            +++  + P+L+++    +  + ICGD HGQY DLL +F+  G P   N YLF GD+VDRG  S E    L AYK+ YP+  F+
Sbjct:  192 KELLEKTPSLIDIPVKGDETLVICGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRGSWSTEVAFTLYAYKLLYPDAVFI 274          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PPE2_HUMAN (Serine/threonine-protein phosphatase with EF-hands 2 OS=Homo sapiens GN=PPEF2 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 3.452e-11
Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 2
Query:  242 QLSESEIKQLCVASRDIFMRQPNLLELEA----PMKICGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            QL    +  L   ++   ++ PN+  +       + +CGD+HGQ  DL+ +F   G P P+ +Y+F GD+VDRGK S+E + +L A+ + YP+ F L
Sbjct:  140 QLHARYVLNLLYETKKHLVQLPNINRVSTCYSEEITVCGDLHGQLDDLIFIFYKNGLPSPERSYVFNGDFVDRGKDSVEILMILFAFMLVYPKEFHL 236          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PPE2_MOUSE (Serine/threonine-protein phosphatase with EF-hands 2 OS=Mus musculus GN=Ppef2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.888e-11
Identity = 35/97 (36.08%), Postives = 54/97 (55.67%), Query Frame = 2
Query:  242 QLSESEIKQLCVASRDIFMRQPNLLELEA----PMKICGDVHGQYSDLLRLFEYGGYP-PKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            QL    +  L   +R    + PN+  +       + +CGD+HGQ  DL+ +F   G P P+  Y+F GD+VDRGK S+E + +L A+ + YP+ F L
Sbjct:  140 QLHARYVLNLLYETRKHLAQLPNINRVSTCYSEEVTVCGDLHGQLDDLIFIFYKNGLPSPERAYVFNGDFVDRGKDSVEVLMVLFAFMLVYPKEFHL 236          
The following BLAST results are available for this feature:
BLAST of DN618143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
YY06_CAEEL1.656e-1339.64Putative serine/threonine-protein phosphatase C27B... [more]
PPT1_YEAST4.817e-1344.58Serine/threonine-protein phosphatase T OS=Saccharo... [more]
PPP5_SOLLC8.217e-1340.40Serine/threonine-protein phosphatase 5 OS=Solanum ... [more]
PPP5_RAT2.391e-1239.33Serine/threonine-protein phosphatase 5 OS=Rattus n... [more]
PPP5_MOUSE2.391e-1239.33Serine/threonine-protein phosphatase 5 OS=Mus musc... [more]
PPP5_HUMAN2.391e-1239.33Serine/threonine-protein phosphatase 5 OS=Homo sap... [more]
PPT1_SCHPO5.326e-1242.17Serine/threonine-protein phosphatase T OS=Schizosa... [more]
PPE2_HUMAN3.452e-1135.05Serine/threonine-protein phosphatase with EF-hands... [more]
PPE2_MOUSE5.888e-1136.08Serine/threonine-protein phosphatase with EF-hands... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618143 ID=DN618143; Name=DN618143; organism=Citrus sinensis; type=EST; length=517bp
GAAAACGTACACAAACAGAACAAGAAGACCGAAAGCTAACAAAAACTGAA
ACTCTCTCTGATTCTCTCCTTGTGTGTGAGATCATCTTTGATTTTTTAAT
CAATCAAAGCCATTGAAAACCAACTATCAAATGGCAACAACACAAGGGCA
GCAGCAGGGTACCATCATGGACCCGAATGCACTGGATGACATAATCCACC
GGCTTACGGAGGTTCGATTCGCCCGACCCGGCAAGCAAGTCCAGCTTTCT
GAGTCTGAGATCAAGCAGCTTTGTGTTGCCTCCAGGGACATCTTCATGAG
ACAACCTAATTTGCTCGAACTTGAAGCCCCCATGAAAATTTGTGGTGATG
TACATGGACAATATAGTGATTTATTGAGGCTTTTCGAATACGGAGGTTAT
CCTCCTAAAGCCAATTATTTGTTTTTAGGGGACTATGTTGATCGTGGGAA
GCAGAGTTTGGAAACAATATGCCTTTTGCTTGCCTATAAGATTAAGTATC
CAGAGAACTTTTTTCTT
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