DN618143

Overview
NameDN618143
Unique NameDN618143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP1A_BOVIN (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Bos taurus GN=PPP1CA PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.342e-47
Identity = 89/112 (79.46%), Postives = 102/112 (91.07%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            LD II RL EV+ +RPGK VQL+E+EI+ LC+ SR+IF+ QP LLELEAP+KICGD+HGQY DLLRLFEYGG+PP++NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct:    9 LDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 120          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP12_DROME (Serine/threonine-protein phosphatase alpha-2 isoform OS=Drosophila melanogaster GN=Pp1-87B PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.342e-47
Identity = 90/112 (80.36%), Postives = 100/112 (89.29%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            +D II RL EVR ARPGK VQLSE EI+ LC+ SR+IF+ QP LLELEAP+KICGD+HGQY DLLRLFEYGG+PP++NYLFLGDYVDRGKQSLETICLLLAYKIKY ENFFL
Sbjct:    7 IDSIISRLLEVRGARPGKNVQLSEGEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYSENFFL 118          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP15_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 5 OS=Arabidopsis thaliana GN=TOPP5 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.753e-47
Identity = 91/118 (77.12%), Postives = 102/118 (86.44%), Query Frame = 2
Query:  167 MDPNALDDIIHRLTEVRFARPG-KQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            MDP  LDDII RL + R  + G KQ  L++SEI+QLC  SR+IF++QP LLEL AP+KICGD+HGQYSDLLRLFEYGG+PP ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct:    9 MDPAVLDDIIRRLLDYRNPKAGTKQAMLNDSEIRQLCFVSREIFLQQPCLLELAAPVKICGDIHGQYSDLLRLFEYGGFPPAANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 126          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP13_DROME (Serine/threonine-protein phosphatase alpha-3 isoform OS=Drosophila melanogaster GN=Pp1-13C PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.753e-47
Identity = 91/112 (81.25%), Postives = 99/112 (88.39%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            L+ II RL EVR ARPGK VQLSE EI+ LC+ SR+I + QP LLELEAP+KICGD+HGQY DLLRLFEYGGYPP+ANYLFLGDYVDRGKQSLETICLLLAYKIKY ENFFL
Sbjct:    7 LESIISRLLEVRGARPGKNVQLSEGEIRGLCLKSREILLAQPILLELEAPLKICGDIHGQYYDLLRLFEYGGYPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYSENFFL 118          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP1_MEDVA (Serine/threonine-protein phosphatase PP1 OS=Medicago varia GN=PP1 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.989e-47
Identity = 87/117 (74.36%), Postives = 102/117 (87.18%), Query Frame = 2
Query:  167 MDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            MD   LDDII +L   +  R  KQV L+E++I+QLC ++++IF+ QPNLLELEAP+KICGDVHGQ+SDLLRLFEYGGYPP+ANYLFLGDYVDRGKQS+ETICLLLAYKIKY ENFFL
Sbjct:    1 MDDTVLDDIIKKLVSAKNGRTTKQVHLTEADIRQLCTSAKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFL 117          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP1A_MOUSE (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Mus musculus GN=Ppp1ca PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.989e-47
Identity = 88/112 (78.57%), Postives = 102/112 (91.07%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            LD II RL EV+ +RPGK VQL+E+EI+ LC+ SR+IF+ QP LLELEAP+KICGD+HGQY DLLRLFEYGG+PP++NYLFLGDYVDRGKQSLETICLLLAYKI+YPENFFL
Sbjct:    9 LDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFL 120          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP11_SCHPO (Serine/threonine-protein phosphatase PP1-1 OS=Schizosaccharomyces pombe GN=dis2 PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.904e-47
Identity = 89/112 (79.46%), Postives = 100/112 (89.29%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            LD II RL EVR +RPG+QVQLSE EI+ LC  +R+IF+ QP LLELEAP+KICGD+HGQY DLLRLFEYGG+PP+ANYLFLGDYVDRGKQSLE ICLLLAYKIKYPENFF+
Sbjct:    8 LDSIIDRLLEVRGSRPGRQVQLSEDEIRFLCNKAREIFISQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLEVICLLLAYKIKYPENFFI 119          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: GLC7A_CAEEL (Serine/threonine-protein phosphatase PP1-alpha OS=Caenorhabditis elegans GN=gsp-1 PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 3.904e-47
Identity = 87/112 (77.68%), Postives = 101/112 (90.18%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            +D++I RL EVR  RPGK V +SE+EI+ LC  SR+IF+ QP LLELEAP+KICGD+HGQY+DLLRLFEYGG+PP+ANYLFLGDYVDRGKQSLETICLLLAYK+KYPENFFL
Sbjct:    9 IDNLITRLLEVRGCRPGKPVTMSEAEIRALCHKSREIFLSQPILLELEAPLKICGDIHGQYNDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFL 120          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: GLC7A_CAEBR (Serine/threonine-protein phosphatase PP1-alpha OS=Caenorhabditis briggsae GN=gsp-1 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 3.904e-47
Identity = 87/112 (77.68%), Postives = 101/112 (90.18%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            +D++I RL EVR  RPGK V +SE+EI+ LC  SR+IF+ QP LLELEAP+KICGD+HGQY+DLLRLFEYGG+PP+ANYLFLGDYVDRGKQSLETICLLLAYK+KYPENFFL
Sbjct:    9 IDNLITRLLEVRGCRPGKPVTMSEAEIRALCHKSREIFLSQPILLELEAPLKICGDIHGQYNDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFL 120          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP1B_DROME (Serine/threonine-protein phosphatase beta isoform OS=Drosophila melanogaster GN=flw PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.938e-46
Identity = 85/112 (75.89%), Postives = 101/112 (90.18%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            +D +I RL E+R  R GKQVQ++E+E++ LC+ SR+IF++QP LLELEAP+ ICGD+HGQY+DLLRLFEYGG+PP ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct:    8 VDSLIQRLLEMRSCRTGKQVQMTEAEVRGLCLKSREIFLQQPILLELEAPLIICGDIHGQYTDLLRLFEYGGFPPAANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 119          
The following BLAST results are available for this feature:
BLAST of DN618143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PP1A_BOVIN1.342e-4779.46Serine/threonine-protein phosphatase PP1-alpha cat... [more]
PP12_DROME1.342e-4780.36Serine/threonine-protein phosphatase alpha-2 isofo... [more]
PP15_ARATH1.753e-4777.12Serine/threonine-protein phosphatase PP1 isozyme 5... [more]
PP13_DROME1.753e-4781.25Serine/threonine-protein phosphatase alpha-3 isofo... [more]
PP1_MEDVA2.989e-4774.36Serine/threonine-protein phosphatase PP1 OS=Medica... [more]
PP1A_MOUSE2.989e-4778.57Serine/threonine-protein phosphatase PP1-alpha cat... [more]
PP11_SCHPO3.904e-4779.46Serine/threonine-protein phosphatase PP1-1 OS=Schi... [more]
GLC7A_CAEEL3.904e-4777.68Serine/threonine-protein phosphatase PP1-alpha OS=... [more]
GLC7A_CAEBR3.904e-4777.68Serine/threonine-protein phosphatase PP1-alpha OS=... [more]
PP1B_DROME1.938e-4675.89Serine/threonine-protein phosphatase beta isoform ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_02C17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618143 ID=DN618143; Name=DN618143; organism=Citrus sinensis; type=EST; length=517bp
GAAAACGTACACAAACAGAACAAGAAGACCGAAAGCTAACAAAAACTGAA
ACTCTCTCTGATTCTCTCCTTGTGTGTGAGATCATCTTTGATTTTTTAAT
CAATCAAAGCCATTGAAAACCAACTATCAAATGGCAACAACACAAGGGCA
GCAGCAGGGTACCATCATGGACCCGAATGCACTGGATGACATAATCCACC
GGCTTACGGAGGTTCGATTCGCCCGACCCGGCAAGCAAGTCCAGCTTTCT
GAGTCTGAGATCAAGCAGCTTTGTGTTGCCTCCAGGGACATCTTCATGAG
ACAACCTAATTTGCTCGAACTTGAAGCCCCCATGAAAATTTGTGGTGATG
TACATGGACAATATAGTGATTTATTGAGGCTTTTCGAATACGGAGGTTAT
CCTCCTAAAGCCAATTATTTGTTTTTAGGGGACTATGTTGATCGTGGGAA
GCAGAGTTTGGAAACAATATGCCTTTTGCTTGCCTATAAGATTAAGTATC
CAGAGAACTTTTTTCTT
back to top