DN618143

Overview
NameDN618143
Unique NameDN618143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP1_BRANA (Serine/threonine-protein phosphatase PP1 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.085e-24
Identity = 49/58 (84.48%), Postives = 53/58 (91.38%), Query Frame = 2
Query:  344 GDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            GD+HGQY DLLRLFEYGGYPP AN+LFLGDYVDRGKQSLETICLLLAYKI+YP   +L
Sbjct:    1 GDIHGQYQDLLRLFEYGGYPPSANFLFLGDYVDRGKQSLETICLLLAYKIRYPSKIYL 58          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2AA_RAT (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus GN=Ppp2ca PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.765e-23
Identity = 51/108 (47.22%), Postives = 72/108 (66.67%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            LD  I +L E +        QLSES++K LC  +++I  ++ N+ E+  P+ +CGDVHGQ+ DL+ LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++Y E
Sbjct:   10 LDQWIEQLNECK--------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRE 109          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2AA_RABIT (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Oryctolagus cuniculus GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.765e-23
Identity = 51/108 (47.22%), Postives = 72/108 (66.67%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            LD  I +L E +        QLSES++K LC  +++I  ++ N+ E+  P+ +CGDVHGQ+ DL+ LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++Y E
Sbjct:   10 LDQWIEQLNECK--------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRE 109          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2AA_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Sus scrofa GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.765e-23
Identity = 51/108 (47.22%), Postives = 72/108 (66.67%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            LD  I +L E +        QLSES++K LC  +++I  ++ N+ E+  P+ +CGDVHGQ+ DL+ LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++Y E
Sbjct:   10 LDQWIEQLNECK--------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRE 109          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2AA_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Mus musculus GN=Ppp2ca PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.765e-23
Identity = 51/108 (47.22%), Postives = 72/108 (66.67%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            LD  I +L E +        QLSES++K LC  +++I  ++ N+ E+  P+ +CGDVHGQ+ DL+ LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++Y E
Sbjct:   10 LDQWIEQLNECK--------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRE 109          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2AA_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Homo sapiens GN=PPP2CA PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.765e-23
Identity = 51/108 (47.22%), Postives = 72/108 (66.67%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            LD  I +L E +        QLSES++K LC  +++I  ++ N+ E+  P+ +CGDVHGQ+ DL+ LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++Y E
Sbjct:   10 LDQWIEQLNECK--------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRE 109          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2AA_BOVIN (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Bos taurus GN=PPP2CA PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.765e-23
Identity = 51/108 (47.22%), Postives = 72/108 (66.67%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            LD  I +L E +        QLSES++K LC  +++I  ++ N+ E+  P+ +CGDVHGQ+ DL+ LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++Y E
Sbjct:   10 LDQWIEQLNECK--------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRE 109          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PPX2_PARTE (Serine/threonine-protein phosphatase PP-X homolog 2 OS=Paramecium tetraurelia GN=Ppx2 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.305e-23
Identity = 47/91 (51.65%), Postives = 67/91 (73.63%), Query Frame = 2
Query:  245 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            L E+++K LC  ++DI   + N++ +EAP+ ICGD+HGQ+ DL+ LF+ GG  P+ NYLFLGD+VDRG  S+ET  LLLA K++YP+   L
Sbjct:   17 LKETDVKILCNKAKDILNNEDNVIRVEAPVTICGDIHGQFQDLMELFKVGGDVPETNYLFLGDFVDRGYNSVETFLLLLALKVRYPDQITL 107          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PPX1_ARATH (Serine/threonine-protein phosphatase PP-X isozyme 1 OS=Arabidopsis thaliana GN=PPX1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.305e-23
Identity = 48/112 (42.86%), Postives = 77/112 (68.75%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            + D+  ++ +++   P     LSESE+K LC+ + +I + + N+  ++AP+ +CGD+HGQ+ D++ LF+ GG  PK NYLF+GD+VDRG  S+ET  LLLA K++YP+   L
Sbjct:    1 MSDLDRQIGQLKRCEP-----LSESEVKALCLKAMEILVEESNVQRVDAPVTLCGDIHGQFYDMMELFKVGGDCPKTNYLFMGDFVDRGYYSVETFLLLLALKVRYPDRITL 107          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: BSL1_ARATH (Serine/threonine-protein phosphatase BSL1 OS=Arabidopsis thaliana GN=BSL1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.305e-23
Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 2
Query:  245 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKA------NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            L   E+ +LC A+  IFM +  +L+L+AP+K+ GD+HGQ+ DL+RLF+  G+P  A      +YLFLGDYVDRG+ SLETI LLLA KI+YPEN  L
Sbjct:  550 LDSYEVGELCYAAEQIFMHEQTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHL 646          
The following BLAST results are available for this feature:
BLAST of DN618143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PP1_BRANA2.085e-2484.48Serine/threonine-protein phosphatase PP1 (Fragment... [more]
PP2AA_RAT1.765e-2347.22Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_RABIT1.765e-2347.22Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_PIG1.765e-2347.22Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_MOUSE1.765e-2347.22Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_HUMAN1.765e-2347.22Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_BOVIN1.765e-2347.22Serine/threonine-protein phosphatase 2A catalytic ... [more]
PPX2_PARTE2.305e-2351.65Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPX1_ARATH2.305e-2342.86Serine/threonine-protein phosphatase PP-X isozyme ... [more]
BSL1_ARATH2.305e-2354.64Serine/threonine-protein phosphatase BSL1 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618143 ID=DN618143; Name=DN618143; organism=Citrus sinensis; type=EST; length=517bp
GAAAACGTACACAAACAGAACAAGAAGACCGAAAGCTAACAAAAACTGAA
ACTCTCTCTGATTCTCTCCTTGTGTGTGAGATCATCTTTGATTTTTTAAT
CAATCAAAGCCATTGAAAACCAACTATCAAATGGCAACAACACAAGGGCA
GCAGCAGGGTACCATCATGGACCCGAATGCACTGGATGACATAATCCACC
GGCTTACGGAGGTTCGATTCGCCCGACCCGGCAAGCAAGTCCAGCTTTCT
GAGTCTGAGATCAAGCAGCTTTGTGTTGCCTCCAGGGACATCTTCATGAG
ACAACCTAATTTGCTCGAACTTGAAGCCCCCATGAAAATTTGTGGTGATG
TACATGGACAATATAGTGATTTATTGAGGCTTTTCGAATACGGAGGTTAT
CCTCCTAAAGCCAATTATTTGTTTTTAGGGGACTATGTTGATCGTGGGAA
GCAGAGTTTGGAAACAATATGCCTTTTGCTTGCCTATAAGATTAAGTATC
CAGAGAACTTTTTTCTT
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