DN618143

Overview
NameDN618143
Unique NameDN618143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2AB_RAT (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus GN=Ppp2cb PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.010e-23
Identity = 48/108 (44.44%), Postives = 73/108 (67.59%), Query Frame = 2 
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            LD  + +L E +        QL+E++++ LC  +++I  ++ N+ E+  P+ +CGDVHGQ+ DL+ LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++YPE
Sbjct:   10 LDQWVEQLNECK--------QLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPE 109
[Close]
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2AB_RABIT (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Oryctolagus cuniculus GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.010e-23
Identity = 48/108 (44.44%), Postives = 73/108 (67.59%), Query Frame = 2 
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            LD  + +L E +        QL+E++++ LC  +++I  ++ N+ E+  P+ +CGDVHGQ+ DL+ LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++YPE
Sbjct:   10 LDQWVEQLNECK--------QLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPE 109
[Close]
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2AB_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Mus musculus GN=Ppp2cb PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.010e-23
Identity = 48/108 (44.44%), Postives = 73/108 (67.59%), Query Frame = 2 
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            LD  + +L E +        QL+E++++ LC  +++I  ++ N+ E+  P+ +CGDVHGQ+ DL+ LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++YPE
Sbjct:   10 LDQWVEQLNECK--------QLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPE 109
[Close]
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2AB_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Homo sapiens GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.010e-23
Identity = 48/108 (44.44%), Postives = 73/108 (67.59%), Query Frame = 2 
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            LD  + +L E +        QL+E++++ LC  +++I  ++ N+ E+  P+ +CGDVHGQ+ DL+ LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++YPE
Sbjct:   10 LDQWVEQLNECK--------QLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPE 109
[Close]
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2AB_BOVIN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Bos taurus GN=PPP2CB PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.010e-23
Identity = 48/108 (44.44%), Postives = 73/108 (67.59%), Query Frame = 2 
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            LD  + +L E +        QL+E++++ LC  +++I  ++ N+ E+  P+ +CGDVHGQ+ DL+ LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++YPE
Sbjct:   10 LDQWVEQLNECK--------QLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPE 109
[Close]
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PPX1_PARTE (Serine/threonine-protein phosphatase PP-X homolog 1 OS=Paramecium tetraurelia GN=Ppx1 PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 3.931e-23
Identity = 47/91 (51.65%), Postives = 67/91 (73.63%), Query Frame = 2 
Query:  245 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            L E+++K LC  ++DI   + N++ +EAP+ ICGD+HGQ+ DL+ LF+ GG  P+ NYLFLGD+VDRG  S+ET  LLLA K++YP+   L
Sbjct:   17 LKETDVKILCNKAKDILNNEDNVIRVEAPVTICGDIHGQFYDLMELFKVGGDVPETNYLFLGDFVDRGYNSVETFLLLLALKVRYPDQITL 107
[Close]
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2AB_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform (Fragment) OS=Sus scrofa GN=PPP2CB PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 5.135e-23
Identity = 44/88 (50.00%), Postives = 66/88 (75.00%), Query Frame = 2 
Query:  242 QLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            QL+E++++ LC  +++I  ++ N+ E+  P+ +CGDVHGQ+ DL+ LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++YPE
Sbjct:    6 QLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPE 93
[Close]
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2A4_ORYSI (Putative serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A4 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.135e-23
Identity = 51/108 (47.22%), Postives = 73/108 (67.59%), Query Frame = 2 
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            LD  I +L E R         LSE+E+K LC  +++I M + N+  +++P+ ICGD+HGQ+ DL+ LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++YP+
Sbjct:   16 LDAQIEQLMECR--------PLSETEVKTLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQ 115
[Close]
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PPX4_PARTE (Serine/threonine-protein phosphatase PP-X homolog 4 OS=Paramecium tetraurelia GN=Ppx4 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.758e-23
Identity = 46/91 (50.55%), Postives = 66/91 (72.53%), Query Frame = 2 
Query:  245 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            ++E E+K LC  +R+I + + N+  ++AP+ ICGD+HGQ+ DL+ LF+ GG  P  NYLFLGD+VDRG  S+ET  LLLA K++YP+   L
Sbjct:   19 ITEGEVKALCTKAREILVEESNVQRVDAPVTICGDIHGQFFDLMELFKVGGDCPDTNYLFLGDFVDRGFNSVETFLLLLALKVRYPDRITL 109
[Close]
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PPX3_PARTE (Serine/threonine-protein phosphatase PP-X homolog 3 OS=Paramecium tetraurelia GN=Ppx3 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.758e-23
Identity = 46/91 (50.55%), Postives = 66/91 (72.53%), Query Frame = 2 
Query:  245 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            ++E E+K LC  +R+I + + N+  ++AP+ ICGD+HGQ+ DL+ LF+ GG  P  NYLFLGD+VDRG  S+ET  LLLA K++YP+   L
Sbjct:   19 ITEGEVKALCTKAREILVEESNVQRVDAPVTICGDIHGQFFDLMELFKVGGDCPDTNYLFLGDFVDRGFNSVETFLLLLALKVRYPDRITL 109
The following BLAST results are available for this feature:
BLAST of DN618143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PP2AB_RAT3.010e-2344.44Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_RABIT3.010e-2344.44Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_MOUSE3.010e-2344.44Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_HUMAN3.010e-2344.44Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_BOVIN3.010e-2344.44Serine/threonine-protein phosphatase 2A catalytic ... [more]
PPX1_PARTE3.931e-2351.65Serine/threonine-protein phosphatase PP-X homolog ... [more]
PP2AB_PIG5.135e-2350.00Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A4_ORYSI5.135e-2347.22Putative serine/threonine-protein phosphatase PP2A... [more]
PPX4_PARTE8.758e-2350.55Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPX3_PARTE8.758e-2350.55Serine/threonine-protein phosphatase PP-X homolog ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_02C17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618143 ID=DN618143; Name=DN618143; organism=Citrus sinensis; type=EST; length=517bp
GAAAACGTACACAAACAGAACAAGAAGACCGAAAGCTAACAAAAACTGAA
ACTCTCTCTGATTCTCTCCTTGTGTGTGAGATCATCTTTGATTTTTTAAT
CAATCAAAGCCATTGAAAACCAACTATCAAATGGCAACAACACAAGGGCA
GCAGCAGGGTACCATCATGGACCCGAATGCACTGGATGACATAATCCACC
GGCTTACGGAGGTTCGATTCGCCCGACCCGGCAAGCAAGTCCAGCTTTCT
GAGTCTGAGATCAAGCAGCTTTGTGTTGCCTCCAGGGACATCTTCATGAG
ACAACCTAATTTGCTCGAACTTGAAGCCCCCATGAAAATTTGTGGTGATG
TACATGGACAATATAGTGATTTATTGAGGCTTTTCGAATACGGAGGTTAT
CCTCCTAAAGCCAATTATTTGTTTTTAGGGGACTATGTTGATCGTGGGAA
GCAGAGTTTGGAAACAATATGCCTTTTGCTTGCCTATAAGATTAAGTATC
CAGAGAACTTTTTTCTT
back to top