DN618143

Overview
NameDN618143
Unique NameDN618143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2A4_ORYSJ (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A4 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 8.758e-23
Identity = 51/108 (47.22%), Postives = 72/108 (66.67%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            LD  I +L E R         LSE E+K LC  +++I M + N+  +++P+ ICGD+HGQ+ DL+ LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++YP+
Sbjct:   15 LDAQIEQLMECR--------PLSEPEVKTLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQ 114          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PPX2_ARATH (Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana GN=PPX2 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.144e-22
Identity = 47/91 (51.65%), Postives = 66/91 (72.53%), Query Frame = 2
Query:  245 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            L ESE+K LC+ + +I + + N+  ++AP+ ICGD+HGQ+ D+  LF+ GG  PK NYLFLGD+VDRG  S+ET  LLLA K++YP+   L
Sbjct:   17 LKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITL 107          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2A_MEDSA (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Medicago sativa GN=PP2A PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.494e-22
Identity = 48/106 (45.28%), Postives = 74/106 (69.81%), Query Frame = 2
Query:  188 DIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            D+ H L E + ++  +   LSE ++K+LC  +++I M + N+  +++P+ ICGD+HGQ+ DL  LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++YP+
Sbjct:    9 DVTHDLNE-QISQLMQCKPLSEQQVKELCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQ 113          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2A2_ORYSJ (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.548e-22
Identity = 49/108 (45.37%), Postives = 71/108 (65.74%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            LDD I RL + +         L E E++ LC  +++I M + N+  +++P+ ICGD+HGQ+ DL  LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++YP+
Sbjct:    8 LDDQIERLMQCK--------PLPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQ 107          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP2A2_ORYSI (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A2 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 2.548e-22
Identity = 49/108 (45.37%), Postives = 71/108 (65.74%), Query Frame = 2
Query:  182 LDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPE 505
            LDD I RL + +         L E E++ LC  +++I M + N+  +++P+ ICGD+HGQ+ DL  LF  GG  P  NYLF+GDYVDRG  S+ET+ LL+A K++YP+
Sbjct:    8 LDDQIERLMQCK--------PLPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQ 107          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP4C_XENTR (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Xenopus tropicalis GN=ppp4c PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.347e-22
Identity = 44/91 (48.35%), Postives = 65/91 (71.43%), Query Frame = 2
Query:  245 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            + ESE+K LC  +R+I + + N+  +++P+ +CGD+HGQ+ DL  LF  GG  P+ NYLF+GD+VDRG  S+ET  LLLA K++YP+   L
Sbjct:   20 IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 110          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP4C_XENLA (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Xenopus laevis GN=ppp4c PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.347e-22
Identity = 44/91 (48.35%), Postives = 65/91 (71.43%), Query Frame = 2
Query:  245 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            + ESE+K LC  +R+I + + N+  +++P+ +CGD+HGQ+ DL  LF  GG  P+ NYLF+GD+VDRG  S+ET  LLLA K++YP+   L
Sbjct:   20 IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 110          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP4C_RAT (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Rattus norvegicus GN=Ppp4c PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.347e-22
Identity = 44/91 (48.35%), Postives = 65/91 (71.43%), Query Frame = 2
Query:  245 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            + ESE+K LC  +R+I + + N+  +++P+ +CGD+HGQ+ DL  LF  GG  P+ NYLF+GD+VDRG  S+ET  LLLA K++YP+   L
Sbjct:   20 IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 110          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP4C_RABIT (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Oryctolagus cuniculus GN=PPP4C PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 4.347e-22
Identity = 44/91 (48.35%), Postives = 65/91 (71.43%), Query Frame = 2
Query:  245 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            + ESE+K LC  +R+I + + N+  +++P+ +CGD+HGQ+ DL  LF  GG  P+ NYLF+GD+VDRG  S+ET  LLLA K++YP+   L
Sbjct:   20 IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 110          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP4C_PONAB (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Pongo abelii GN=PPP4C PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.347e-22
Identity = 44/91 (48.35%), Postives = 65/91 (71.43%), Query Frame = 2
Query:  245 LSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            + ESE+K LC  +R+I + + N+  +++P+ +CGD+HGQ+ DL  LF  GG  P+ NYLF+GD+VDRG  S+ET  LLLA K++YP+   L
Sbjct:   20 IKESEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 110          
The following BLAST results are available for this feature:
BLAST of DN618143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PP2A4_ORYSJ8.758e-2347.22Serine/threonine-protein phosphatase PP2A-4 cataly... [more]
PPX2_ARATH1.144e-2251.65Serine/threonine-protein phosphatase PP-X isozyme ... [more]
PP2A_MEDSA1.494e-2245.28Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A2_ORYSJ2.548e-2245.37Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A2_ORYSI2.548e-2245.37Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP4C_XENTR4.347e-2248.35Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_XENLA4.347e-2248.35Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_RAT4.347e-2248.35Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_RABIT4.347e-2248.35Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_PONAB4.347e-2248.35Serine/threonine-protein phosphatase 4 catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618143 ID=DN618143; Name=DN618143; organism=Citrus sinensis; type=EST; length=517bp
GAAAACGTACACAAACAGAACAAGAAGACCGAAAGCTAACAAAAACTGAA
ACTCTCTCTGATTCTCTCCTTGTGTGTGAGATCATCTTTGATTTTTTAAT
CAATCAAAGCCATTGAAAACCAACTATCAAATGGCAACAACACAAGGGCA
GCAGCAGGGTACCATCATGGACCCGAATGCACTGGATGACATAATCCACC
GGCTTACGGAGGTTCGATTCGCCCGACCCGGCAAGCAAGTCCAGCTTTCT
GAGTCTGAGATCAAGCAGCTTTGTGTTGCCTCCAGGGACATCTTCATGAG
ACAACCTAATTTGCTCGAACTTGAAGCCCCCATGAAAATTTGTGGTGATG
TACATGGACAATATAGTGATTTATTGAGGCTTTTCGAATACGGAGGTTAT
CCTCCTAAAGCCAATTATTTGTTTTTAGGGGACTATGTTGATCGTGGGAA
GCAGAGTTTGGAAACAATATGCCTTTTGCTTGCCTATAAGATTAAGTATC
CAGAGAACTTTTTTCTT
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