DN618140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PHSG_SYNY3 (Glycogen phosphorylase OS=Synechocystis sp. (strain PCC 6803) GN=glgP PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.335e-15 Identity = 43/89 (48.31%), Postives = 59/89 (66.29%), Query Frame = -3 Query: 245 IRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 502 I SG F D + PL+DSL G D +LV DF +Y++ Q++V +AYKDQ+ W +M+IL+ A GKFSSDRTI +YA++IW I Sbjct: 744 INSGFFSHGDTALFRPLMDSLLGQ------DPYLVFADFQAYVDCQNQVGEAYKDQENWARMAILNVARMGKFSSDRTIREYAEDIWAI 826
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PHSG_SHIFL (Glycogen phosphorylase OS=Shigella flexneri GN=glgP PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.241e-13 Identity = 45/123 (36.59%), Postives = 69/123 (56.10%), Query Frame = -3 Query: 233 AEQVPKLRKE--REDGLFKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 586 AE+V +LR++ + ++ D + I SG F D Y L+DSL GD++ V D+ SY++ QD+VD+ Y+ Q++W ++L+ A G FSSDRTI +YA IW+I R Sbjct: 697 AEEVEELRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEDPGRYRDLVDSL-----INFGDHYQVLADYRSYVDCQDKVDELYELQEEWTAKAMLNIANMGYFSSDRTIKEYADHIWHIDPVR 814
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PHSG_ECOLI (Glycogen phosphorylase OS=Escherichia coli (strain K12) GN=glgP PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.241e-13 Identity = 45/123 (36.59%), Postives = 69/123 (56.10%), Query Frame = -3 Query: 233 AEQVPKLRKE--REDGLFKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 586 AE+V +LR++ + ++ D + I SG F D Y L+DSL GD++ V D+ SY++ QD+VD+ Y+ Q++W ++L+ A G FSSDRTI +YA IW+I R Sbjct: 697 AEEVEELRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEDPGRYRDLVDSL-----INFGDHYQVLADYRSYVDCQDKVDELYELQEEWTAKAMLNIANMGYFSSDRTIKEYADHIWHIDPVR 814
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PYG_DROME (Glycogen phosphorylase OS=Drosophila melanogaster GN=GlyP PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.927e-13 Identity = 41/115 (35.65%), Postives = 69/115 (60.00%), Query Frame = -3 Query: 245 EQVPKLRKEREDGL--FKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 583 ++V L+K+ + + +P ++ I+ G F + N + + Y D++ + D+ +Y++AQD V + Y++Q KWL+MSI + A SGKFSSDRTIA+YA+EIW + Sbjct: 717 DEVEALKKKGYNAYDYYNANPEVKQVIDQIQGGFFSPGNPNEFKNIADILLKY---DHYYLLADYDAYIKAQDLVSKTYQNQAKWLEMSINNIASSGKFSSDRTIAEYAREIWGV 828
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PHSG_YEAST (Glycogen phosphorylase OS=Saccharomyces cerevisiae GN=GPH1 PE=1 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 4.993e-13 Identity = 44/119 (36.97%), Postives = 66/119 (55.46%), Query Frame = -3 Query: 245 VAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSY---DYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQK-KWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 589 ++E V +LR + + +I SG F ++ PL+DS++ + GDY+LV DF SYL + VDQ + +Q+ +WLK S+LS A G FSSDR I +Y+ IWN+ Sbjct: 785 LSENVEELRYNHQYHPQDLPSSLDSVLSYIESGQFSPENPNEFKPLVDSIKYH-----GDYYLVSDDFESYLATHELVDQEFHNQRSEWLKKSVLSLANVGFFSSDRCIEEYSDTIWNV 898
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PHSG_CHLTR (Glycogen phosphorylase OS=Chlamydia trachomatis GN=glgP PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.112e-12 Identity = 41/118 (34.75%), Postives = 62/118 (52.54%), Query Frame = -3 Query: 242 EQVPKLRKER-EDGLFKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNIT 583 E++ +LRKE G+ +P +E I F D + P+++ L GD F V D +Y+ Q+RV +K ++W K SI + G G FSSDR+IA+YA IWN++ Sbjct: 698 EEISELRKEYYPQGICNANPTIQEILDMIAQAKFSQEDKDLFKPIVNRL-----LNEGDPFFVLADLEAYINTQNRVASLFKQPEEWTKKSIYNVGGIGFFSSDRSIAEYASNIWNVS 810
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PYGM_MOUSE (Glycogen phosphorylase, muscle form OS=Mus musculus GN=Pygm PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12 Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = -3 Query: 233 DYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 421 D F V D+ Y++ QD+V + YK+ ++W +M I + A SGKFSSDRTIAQYA+EIW + R Sbjct: 770 DRFKVFADYEEYIKCQDKVSELYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR 832
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PHSG_CHLPN (Glycogen phosphorylase OS=Chlamydia pneumoniae GN=glgP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12 Identity = 40/117 (34.19%), Postives = 63/117 (53.85%), Query Frame = -3 Query: 245 EQVPKLRKER-EDGLFKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 583 EQ+ +LR+E + +P+ + + G F S D + P++ L GD F V D SY+ A + V++ +K+ W K+SI +TAG G FSSDR I YA++IW++ Sbjct: 703 EQIVQLRREYCPQTICDKNPKIRQVLDLLEQGFFNSNDKDLFKPIVHRL-----LHEGDPFFVLADLESYIAAHENVNKLFKEPDSWTKISIYNTAGMGFFSSDRAIQDYARDIWHV 814
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PYGM_RAT (Glycogen phosphorylase, muscle form OS=Rattus norvegicus GN=Pygm PE=2 SV=5) HSP 1 Score: 70.8626 bits (172), Expect = 5.521e-12 Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = -3 Query: 233 DYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 421 D F V D+ Y++ QD+V + YK+ ++W +M I + A SGKFSSDRTIAQYA+EIW + R Sbjct: 770 DRFKVFADYEEYIKCQDKVSELYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGLEPSR 832
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PYGM_BOVIN (Glycogen phosphorylase, muscle form OS=Bos taurus GN=PYGM PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.230e-11 Identity = 32/63 (50.79%), Postives = 43/63 (68.25%), Query Frame = -3 Query: 233 DYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 421 D F V D+ Y++ Q+RV YK+ ++W +M I + A SGKFSSDRTIAQYA+EIW + R Sbjct: 770 DRFKVFADYEEYIKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPTR 832 The following BLAST results are available for this feature:
BLAST of DN618140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618140 ID=DN618140; Name=DN618140; organism=Citrus sinensis; type=EST; length=594bpback to top |