DN618137
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618137 vs. ExPASy Swiss-Prot
Match: RS4_LYSTE (40S ribosomal protein S4 OS=Lysiphlebus testaceipes GN=RpS4 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.134e-50 Identity = 92/140 (65.71%), Postives = 115/140 (82.14%), Query Frame = -1 Query: 230 DEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 649 +EEAK+KLCKVR VQ G KG+P++ T+DGRT+RYPDP+IK NDTI+L++ NKI D IKFD GN+ M+TGGRN GRVG + +RE+H GSF+ HI+D+ GH FATR+ NVF IGKGSK +VSLP+GKG+KLSI EE KR Sbjct: 116 NEEAKYKLCKVRRVQTGPKGVPFLVTHDGRTLRYPDPVIKVNDTIQLEIATNKILDSIKFDSGNLCMITGGRNLGRVGTVVSRERHPGSFDICHIKDSQGHTFATRMNNVFIIGKGSKAYVSLPRGKGVKLSIAEERDKR 255
BLAST of DN618137 vs. ExPASy Swiss-Prot
Match: RS4Y1_PONPY (40S ribosomal protein S4, Y isoform 1 OS=Pongo pygmaeus GN=RPS4Y1 PE=3 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 2.788e-50 Identity = 88/139 (63.31%), Postives = 112/139 (80.58%), Query Frame = -1 Query: 230 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 646 EEAK+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE KR Sbjct: 117 EEAKYKLCKVRKITVGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 255
BLAST of DN618137 vs. ExPASy Swiss-Prot
Match: RS4_IXOSC (40S ribosomal protein S4 OS=Ixodes scapularis GN=RpS4 PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 4.755e-50 Identity = 87/139 (62.59%), Postives = 113/139 (81.29%), Query Frame = -1 Query: 230 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 646 EEAK+KLC+V+ VQ G KG+P++ T+D RTIRYPDPLIK NDT+K+DL KI D+IKFD GN+ MVTGG N GRVG+I +RE+H GSF+ +H++D+ GH FATRL +F IGK +KP++SLP+GKGIKLS+ EE +R Sbjct: 117 EEAKYKLCRVKRVQVGPKGVPFLTTHDARTIRYPDPLIKVNDTVKVDLATGKIDDYIKFDSGNVCMVTGGHNLGRVGVITSRERHPGSFDIVHVKDSQGHSFATRLNYIFVIGKSTKPYISLPRGKGIKLSVAEERDRR 255
BLAST of DN618137 vs. ExPASy Swiss-Prot
Match: RS4Y2_PANTR (40S ribosomal protein S4, Y isoform 2 OS=Pan troglodytes GN=RPS4Y2 PE=2 SV=3) HSP 1 Score: 196.438 bits (498), Expect = 1.059e-49 Identity = 87/139 (62.59%), Postives = 111/139 (79.86%), Query Frame = -1 Query: 230 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 646 EEAK+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KIT FIKFD GN+ MV GG N GRVG++ NRE+H GS + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE KR Sbjct: 117 EEAKYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 255
BLAST of DN618137 vs. ExPASy Swiss-Prot
Match: RS4Y1_HUMAN (40S ribosomal protein S4, Y isoform 1 OS=Homo sapiens GN=RPS4Y1 PE=2 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.059e-49 Identity = 87/139 (62.59%), Postives = 112/139 (80.58%), Query Frame = -1 Query: 230 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 646 EEAK+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ EE KR Sbjct: 117 EEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDKR 255
BLAST of DN618137 vs. ExPASy Swiss-Prot
Match: RS4Y1_GORGO (40S ribosomal protein S4, Y isoform 1 OS=Gorilla gorilla gorilla GN=RPS4Y1 PE=3 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 1.807e-49 Identity = 86/139 (61.87%), Postives = 112/139 (80.58%), Query Frame = -1 Query: 230 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 646 EEAK+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L++ EE KR Sbjct: 117 EEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAEERDKR 255
BLAST of DN618137 vs. ExPASy Swiss-Prot
Match: RS4_YARLI (40S ribosomal protein S4 OS=Yarrowia lipolytica GN=RPS4 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.082e-49 Identity = 93/140 (66.43%), Postives = 113/140 (80.71%), Query Frame = -1 Query: 230 DEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 649 DEEA +KL KV+ VQ G+KGIPY+ T+DGRTIRYPDPLIK NDT+K+DL KIT F+KF+ GNIVM TGGRN GRVG I +RE+H+G F+ +HI+DAL ++F TRL NVF IG+G+K +SLPKGKGIKLSI EE R Sbjct: 116 DEEAAYKLGKVKRVQVGKKGIPYLVTHDGRTIRYPDPLIKVNDTVKIDLATGKITSFVKFENGNIVMTTGGRNMGRVGTITHRERHEGGFDIVHIKDALDNQFVTRLTNVFVIGEGNKSLISLPKGKGIKLSIAEERDAR 255
BLAST of DN618137 vs. ExPASy Swiss-Prot
Match: RS4_BOMMO (40S ribosomal protein S4 OS=Bombyx mori GN=RpS4 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.082e-49 Identity = 90/139 (64.75%), Postives = 113/139 (81.29%), Query Frame = -1 Query: 230 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 646 EEAK+KLCKV+ V G K +PY+ T+DGRTIRYPDPLIK ND+I+LD+ KI DFIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +HI+D+ GH FATRL NVF IGKG+K ++SLP+GKGI+L+I EE KR Sbjct: 117 EEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKR 255
BLAST of DN618137 vs. ExPASy Swiss-Prot
Match: RS4Y2_HUMAN (40S ribosomal protein S4, Y isoform 2 OS=Homo sapiens GN=RPS4Y2 PE=1 SV=3) HSP 1 Score: 194.512 bits (493), Expect = 4.025e-49 Identity = 87/139 (62.59%), Postives = 110/139 (79.14%), Query Frame = -1 Query: 230 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 646 EEAK+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KIT FIKFD GN+ MV G N GRVG+I NRE+H GS + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE KR Sbjct: 117 EEAKYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 255
BLAST of DN618137 vs. ExPASy Swiss-Prot
Match: RS4Y1_PANTR (40S ribosomal protein S4, Y isoform 1 OS=Pan troglodytes GN=RPS4Y1 PE=2 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 5.257e-49 Identity = 86/139 (61.87%), Postives = 111/139 (79.86%), Query Frame = -1 Query: 230 EEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 646 EEAK+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ E KR Sbjct: 117 EEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDKR 255 The following BLAST results are available for this feature:
BLAST of DN618137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618137 ID=DN618137; Name=DN618137; organism=Citrus sinensis; type=EST; length=652bpback to top |