DN618135

Overview
NameDN618135
Unique NameDN618135
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618135 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.215e-36
Identity = 77/147 (52.38%), Postives = 103/147 (70.07%), Query Frame = 1
Query:  193 LQPIKSSRPNNLSISASA---SPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSK 621
            + P+KS + +N +++  A    P  +L   KF PIKE  V R M RRY  DM   A +D    GAGSAGLSCAY L +  P+++I I+E +V+PGGG WLGGQL SAMV RKPA  FLD++G+ Y+++ N+VV+KHAALFTST++SK
Sbjct:   24 MDPLKSKQQSNATVNKPAFKPEPAVNLTPIKFAPIKEHQVQRAMVRRYFQDMEERAISDVIIVGAGSAGLSCAYALGTARPDLKITILESNVAPGGGCWLGGQLMSAMVCRKPADEFLDQVGVPYEDEGNFVVVKHAALFTSTVLSK 170          
BLAST of DN618135 vs. ExPASy Swiss-Prot
Match: THI4_THEMA (Putative thiazole biosynthetic enzyme OS=Thermotoga maritima GN=TM_0787 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.888e-13
Identity = 34/99 (34.34%), Postives = 63/99 (63.64%), Query Frame = 1
Query:  286 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVI 582
            +++ ++SR +  RY   +    + D    GAG +GL+ AYEL+KN   ++A+ E+  +PGGG W GG +F+ +V+ K    FL E+ I+Y+ +++++V+
Sbjct:    3 MRDVLISRLIVERYFEKLRNSLELDVAIVGAGPSGLTAAYELAKN-GFRVAVFEERNTPGGGIWGGGMMFNEIVLEKELENFLKEVEIEYEVKEDHIVV 100          
BLAST of DN618135 vs. ExPASy Swiss-Prot
Match: THI4_PYRHO (Putative thiazole biosynthetic enzyme OS=Pyrococcus horikoshii GN=PH1357 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 4.650e-12
Identity = 39/112 (34.82%), Postives = 61/112 (54.46%), Query Frame = 1
Query:  286 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSK 621
            ++E  ++R +   Y  D++   + D    GAG +G+  AY L+K    ++AI E+ +S GGG W GG  F+ +VV+  A   LDE GI Y+E +    +  A    +TI SK
Sbjct:    2 LREVTITRAIVESYYRDLLNNLELDVAIVGAGPSGMVAAYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKVVVQDEAREILDEFGIRYEEFEKGYYVADAIEVATTIASK 112          
BLAST of DN618135 vs. ExPASy Swiss-Prot
Match: THI4_METTH (Putative thiazole biosynthetic enzyme OS=Methanobacterium thermoautotrophicum GN=MTH_1620 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 4.650e-12
Identity = 39/116 (33.62%), Postives = 63/116 (54.31%), Query Frame = 1
Query:  274 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSK 621
            K D IK   +SR +   YM D++ Y + D    G G +GL+  Y L++   +++A+ E+ +S GGG W GG +F+ +VV+      LDE GI  +  D    +  +   TST+ S+
Sbjct:    2 KLDDIK---ISRAIVEGYMEDLLDYMEMDVAIGGGGPSGLTAGYYLAR-AGLKVALFERKLSIGGGMWGGGMMFNKIVVQDEGREILDEFGIRSEPYDEGYHVADSVEATSTLCSR 113          
BLAST of DN618135 vs. ExPASy Swiss-Prot
Match: THI4_HALSA (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarium GN=VNG_2604G PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.073e-12
Identity = 38/107 (35.51%), Postives = 63/107 (58.88%), Query Frame = 1
Query:  277 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI--DYDEQDNYVVIKHA 591
            F    E+ V+R +TR++  + +   +TD    G G +GL  A EL+   ++ + IIE++   GGG WLGG L + + VR PA   LD+LG+  +YDE+++ + +  A
Sbjct:    6 FADANEAEVTRAITRQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVADA 111          
BLAST of DN618135 vs. ExPASy Swiss-Prot
Match: THI4_HALS3 (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE4651F PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.073e-12
Identity = 38/107 (35.51%), Postives = 63/107 (58.88%), Query Frame = 1
Query:  277 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGI--DYDEQDNYVVIKHA 591
            F    E+ V+R +TR++  + +   +TD    G G +GL  A EL+   ++ + IIE++   GGG WLGG L + + VR PA   LD+LG+  +YDE+++ + +  A
Sbjct:    6 FADANEAEVTRAITRQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVADA 111          
BLAST of DN618135 vs. ExPASy Swiss-Prot
Match: THI4_PYRKO (Putative thiazole biosynthetic enzyme OS=Pyrococcus kodakaraensis GN=TK0434 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.932e-12
Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 1
Query:  286 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSK 621
            ++E  +SR +   Y  D++     D    GAG +G+   Y L+K    ++AI E+ +S GGG W G   F+ +VV++ A   LDE G+DY +  N + +  +    ST+ SK
Sbjct:    1 MREIEISRAIVEAYFNDLLQNLQLDIAIVGAGPSGMVAGYYLAKG-GAKVAIFEKKLSVGGGIWGGAMGFNRVVVQESAREILDEFGVDYSQVGNGLYVLDSIELASTLASK 111          
BLAST of DN618135 vs. ExPASy Swiss-Prot
Match: THI4_PYRFU (Putative thiazole biosynthetic enzyme OS=Pyrococcus furiosus GN=PF1530 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.932e-12
Identity = 38/112 (33.93%), Postives = 61/112 (54.46%), Query Frame = 1
Query:  286 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSK 621
            +K+ ++SR +   Y  D++   + D    GAG +G+   Y L+K    ++AI E+ +S GGG W GG  F+ +VV++ A   LDE  I Y+E +    +  A    +TI SK
Sbjct:    2 LKDVVISRAIVESYFKDLLNNLELDVAIVGAGPSGMVAGYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKIVVQEEAKEILDEFDIRYEEFEKGYYVADAIEVATTIASK 112          
BLAST of DN618135 vs. ExPASy Swiss-Prot
Match: THI4_PYRAB (Putative thiazole biosynthetic enzyme OS=Pyrococcus abyssi GN=PYRAB07910 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.036e-11
Identity = 39/112 (34.82%), Postives = 61/112 (54.46%), Query Frame = 1
Query:  286 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSK 621
            ++E  +SR +   Y  D++   + D    GAG +G+  AY L+K    ++AI E+ +S GGG W GG  F+ +VV++ A   LDE  I Y+E +    +  A    +TI SK
Sbjct:    2 LREVTISRAIIESYYRDLLNNLELDVAIVGAGPSGMVAAYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKVVVQEEAREILDEFDIRYEEFEKGYYVADAIEVATTIASK 112          
BLAST of DN618135 vs. ExPASy Swiss-Prot
Match: THI4_HALWD (Putative thiazole biosynthetic enzyme OS=Haloquadratum walsbyi (strain DSM 16790) GN=HQ1276A PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.141e-11
Identity = 35/98 (35.71%), Postives = 56/98 (57.14%), Query Frame = 1
Query:  274 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQD 567
            +F  + E+ V+R + + +  + I   DT+    G G +GL  A EL++   + + I+E++   GGG WLGG L + + VR PA   LDEL + Y+E D
Sbjct:    5 EFADVSEAQVTRAIAKDWGNEFIDRVDTEVIIVGGGPSGLVTAKELAER-GVDVTIVEKNNYLGGGFWLGGFLMNKVTVRDPAQSVLDELDVPYEESD 101          
The following BLAST results are available for this feature:
BLAST of DN618135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
THI4_UROFA1.215e-3652.38Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]
THI4_THEMA1.888e-1334.34Putative thiazole biosynthetic enzyme OS=Thermotog... [more]
THI4_PYRHO4.650e-1234.82Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_METTH4.650e-1233.62Putative thiazole biosynthetic enzyme OS=Methanoba... [more]
THI4_HALSA6.073e-1235.51Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_HALS36.073e-1235.51Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_PYRKO7.932e-1233.04Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_PYRFU7.932e-1233.93Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_PYRAB1.036e-1134.82Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_HALWD5.141e-1135.71Putative thiazole biosynthetic enzyme OS=Haloquadr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C13_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618135 ID=DN618135; Name=DN618135; organism=Citrus sinensis; type=EST; length=623bp
GTCATCATCACTGCTGCAAATCAAATTACTTCTCATTATCAAACTTCTAA
GCAGCAGGGGAAGGAGGGGTAAAAAAAAAAAACCATGGCAGCCATGGCTT
CTACAGCTTTCGCTCCTTCAGTTTCGTCCACCACCAATAAGCTCTTTGAC
TCATCCTTTCATGGGGCTCCCATGTCACCTTCTCTTCTACGTCTTCAACC
CATCAAATCTTCTCGTCCCAACAACTTGTCCATTTCTGCTTCTGCTTCTC
CTCCTTATGACTTGAACACTTTCAAGTTTGACCCCATCAAAGAATCCATT
GTTTCTCGTGAAATGACACGCAGGTACATGACGGACATGATCACTTATGC
TGACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTTGTG
CTTATGAGCTCAGCAAAAACCCCAACATTCAGATTGCTATTATCGAACAG
TCTGTTAGCCCCGGCGGTGGCGCGTGGCTCGGTGGACAGCTCTTCTCTGC
CATGGTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCATCG
ACTACGATGAGCAAGACAACTATGTTGTGATCAAGCATGCAGCGCTGTTC
ACCTCCACTATAATGAGCAAGCT
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