DN618081

Overview
NameDN618081
Unique NameDN618081
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length562
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618081 vs. ExPASy Swiss-Prot
Match: CYC_ENTIN (Cytochrome c OS=Enteromorpha intestinalis PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 5.734e-45
Identity = 78/111 (70.27%), Postives = 94/111 (84.68%), Query Frame = 3
Query:   15 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 347
            ++F +APPG+   G KIFK KCA+CHTV+ GAGHKQGPNLNG FGR SGT  G+SYSAA+K+   +W++ TLYDYLLNPKKYIPGTKMVF GLKKP++RADLIA+LK +TA
Sbjct:    1 STFABAPPGBPAKGAKIFKAKCAZCHTVBAGAGHKQGPNLNGAFGRTSGTAAGFSYSAABKBKTADWBZBTLYDYLLNPKKYIPGTKMVFAGLKKPZBRADLIAFLKDATA 111          
BLAST of DN618081 vs. ExPASy Swiss-Prot
Match: CYC_CHLRE (Cytochrome c OS=Chlamydomonas reinhardtii GN=CYC1 PE=3 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 1.412e-43
Identity = 81/111 (72.97%), Postives = 91/111 (81.98%), Query Frame = 3
Query:   15 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 347
            ++F EAP G+   GEKIFKTKCAQCH  EKG GHKQGPNL GLFGR SGT  G++YS ANK  AV W E TLY+YLLNPKKY+PG KMVF GLKKP++RADLIAYLKQ+TA
Sbjct:    2 STFAEAPAGDLARGEKIFKTKCAQCHVAEKGGGHKQGPNLGGLFGRVSGTAAGFAYSKANKEAAVTWGESTLYEYLLNPKKYMPGNKMVFAGLKKPEERADLIAYLKQATA 112          
BLAST of DN618081 vs. ExPASy Swiss-Prot
Match: CYC_SCHGR (Cytochrome c OS=Schistocerca gregaria PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 1.975e-37
Identity = 69/104 (66.35%), Postives = 85/104 (81.73%), Query Frame = 3
Query:   33 PPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 344
            P G+ + G+KIF  +CAQCHTVE G  HK GPNL+GLFGR++G  PG+SY+ ANK+  + W+E TL+ YL NPKKYIPGTKMVF GLKKP++RADLIAYLK+ST
Sbjct:    4 PQGDVEKGKKIFVQRCAQCHTVEAGGKHKTGPNLHGLFGRKTGQAPGFSYTDANKSKGITWDENTLFIYLENPKKYIPGTKMVFAGLKKPEERADLIAYLKEST 107          
BLAST of DN618081 vs. ExPASy Swiss-Prot
Match: CYC_MACSY (Cytochrome c OS=Macaca sylvanus GN=CYCS PE=3 SV=3)

HSP 1 Score: 152.91 bits (385), Expect = 9.803e-37
Identity = 68/102 (66.67%), Postives = 84/102 (82.35%), Query Frame = 3
Query:   39 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 344
            G+ + G+KIF  KC+QCHTVEKG  HK GPNL+GLFGR++G  PGYSY+AANKN  + W E TL +YL NPKKYIPGTKM+F G+KK ++RADLIAYLK++T
Sbjct:    2 GDVEKGKKIFIMKCSQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGYSYTAANKNKGITWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKAT 103          
BLAST of DN618081 vs. ExPASy Swiss-Prot
Match: CYC_MACMU (Cytochrome c OS=Macaca mulatta GN=CYCS PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 9.803e-37
Identity = 68/102 (66.67%), Postives = 84/102 (82.35%), Query Frame = 3
Query:   39 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 344
            G+ + G+KIF  KC+QCHTVEKG  HK GPNL+GLFGR++G  PGYSY+AANKN  + W E TL +YL NPKKYIPGTKM+F G+KK ++RADLIAYLK++T
Sbjct:    2 GDVEKGKKIFIMKCSQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGYSYTAANKNKGITWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKAT 103          
BLAST of DN618081 vs. ExPASy Swiss-Prot
Match: CYC_HIPAM (Cytochrome c OS=Hippopotamus amphibius GN=CYCS PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 1.672e-36
Identity = 68/102 (66.67%), Postives = 84/102 (82.35%), Query Frame = 3
Query:   39 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 344
            G+ + G+KIF  KCAQCHTVEKG  HK GPNL+GLFGR++G +PG+SY+ ANKN  + W E+TL +YL NPKKYIPGTKM+F G+KK  +RADLIAYLKQ+T
Sbjct:    2 GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQSPGFSYTDANKNKGITWGEETLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKQAT 103          
BLAST of DN618081 vs. ExPASy Swiss-Prot
Match: CYC_PONAB (Cytochrome c OS=Pongo abelii GN=CYCS PE=3 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 2.184e-36
Identity = 68/102 (66.67%), Postives = 84/102 (82.35%), Query Frame = 3
Query:   39 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 344
            G+ + G+KIF  KC+QCHTVEKG  HK GPNL+GLFGR++G  PGYSY+AANKN  + W E TL +YL NPKKYIPGTKM+F G+KK ++RADLIAYLK++T
Sbjct:    2 GDVEKGKKIFIMKCSQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGYSYTAANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKAT 103          
BLAST of DN618081 vs. ExPASy Swiss-Prot
Match: CYC_PANTR (Cytochrome c OS=Pan troglodytes GN=CYCS PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 2.184e-36
Identity = 68/102 (66.67%), Postives = 84/102 (82.35%), Query Frame = 3
Query:   39 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 344
            G+ + G+KIF  KC+QCHTVEKG  HK GPNL+GLFGR++G  PGYSY+AANKN  + W E TL +YL NPKKYIPGTKM+F G+KK ++RADLIAYLK++T
Sbjct:    2 GDVEKGKKIFIMKCSQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGYSYTAANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKAT 103          
BLAST of DN618081 vs. ExPASy Swiss-Prot
Match: CYC_HUMAN (Cytochrome c OS=Homo sapiens GN=CYCS PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 2.184e-36
Identity = 68/102 (66.67%), Postives = 84/102 (82.35%), Query Frame = 3
Query:   39 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 344
            G+ + G+KIF  KC+QCHTVEKG  HK GPNL+GLFGR++G  PGYSY+AANKN  + W E TL +YL NPKKYIPGTKM+F G+KK ++RADLIAYLK++T
Sbjct:    2 GDVEKGKKIFIMKCSQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGYSYTAANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKAT 103          
BLAST of DN618081 vs. ExPASy Swiss-Prot
Match: CYC_GORGO (Cytochrome c OS=Gorilla gorilla gorilla GN=CYCS PE=3 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 2.184e-36
Identity = 68/102 (66.67%), Postives = 84/102 (82.35%), Query Frame = 3
Query:   39 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 344
            G+ + G+KIF  KC+QCHTVEKG  HK GPNL+GLFGR++G  PGYSY+AANKN  + W E TL +YL NPKKYIPGTKM+F G+KK ++RADLIAYLK++T
Sbjct:    2 GDVEKGKKIFIMKCSQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGYSYTAANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKAT 103          
The following BLAST results are available for this feature:
BLAST of DN618081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
CYC_ENTIN5.734e-4570.27Cytochrome c OS=Enteromorpha intestinalis PE=1 SV=... [more]
CYC_CHLRE1.412e-4372.97Cytochrome c OS=Chlamydomonas reinhardtii GN=CYC1 ... [more]
CYC_SCHGR1.975e-3766.35Cytochrome c OS=Schistocerca gregaria PE=1 SV=2[more]
CYC_MACSY9.803e-3766.67Cytochrome c OS=Macaca sylvanus GN=CYCS PE=3 SV=3[more]
CYC_MACMU9.803e-3766.67Cytochrome c OS=Macaca mulatta GN=CYCS PE=1 SV=2[more]
CYC_HIPAM1.672e-3666.67Cytochrome c OS=Hippopotamus amphibius GN=CYCS PE=... [more]
CYC_PONAB2.184e-3666.67Cytochrome c OS=Pongo abelii GN=CYCS PE=3 SV=3[more]
CYC_PANTR2.184e-3666.67Cytochrome c OS=Pan troglodytes GN=CYCS PE=1 SV=2[more]
CYC_HUMAN2.184e-3666.67Cytochrome c OS=Homo sapiens GN=CYCS PE=1 SV=2[more]
CYC_GORGO2.184e-3666.67Cytochrome c OS=Gorilla gorilla gorilla GN=CYCS PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02B09_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618081 ID=DN618081; Name=DN618081; organism=Citrus sinensis; type=EST; length=562bp
ACCACAATAATGGGGCGTCGTTTGATGAGGCACCTCCCGGCAATGCAAAG
GCCGGAGAGAAGATCTTCAAGACCAAGTGCGCTCAGTGCCACACCGTCGA
GAAAGGCGCCGGTCACAAACAAGGTCCTAATTTGAACGGATTGTTTGGAA
GGCAATCGGGGACTACACCTGGGTACTCATACTCTGCGGCTAACAAGAAC
ATGGCTGTGAATTGGGAGGAAAAGACTTTGTATGATTACTTGCTCAACCC
TAAGAAGTACATTCCTGGAACAAAGATGGTATTCCCTGGATTGAAGAAGC
CTCAGGATCGTGCCGACCTTATTGCATATTTGAAACAATCTACTGCATAA
GAACTTGCCGATAGTCAGTTTACCTATTCCATTTTGCAGTTGTTGAAGAT
TGTTTTGCGGTGCGGATATAGTACTGTTTTTTACCAATAAATTTTAAACA
TTTAAGGTTCAGCAATGTTCTTTGTAACTTGAGCATTGCTAATTTGAGAA
AAGGTTGCTGTCATTGGCAAACATAATATTCAATTGAATTTCCTGGTTAT
AATCAAAAAAAA
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