DN618068
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL23_PONAB (60S ribosomal protein L23 OS=Pongo abelii GN=RPL23 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 5.080e-60 Identity = 110/129 (85.27%), Postives = 121/129 (93.80%), Query Frame = 1 Query: 31 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKG+LNRLP+A VGDMVMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP+ KECADLW Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGQLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLW 129
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL23_CANFA (60S ribosomal protein L23 OS=Canis familiaris GN=RPL23 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 5.080e-60 Identity = 111/129 (86.05%), Postives = 120/129 (93.02%), Query Frame = 1 Query: 31 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDMVMATVKKGKP LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP+ KECADLW Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPXLRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVXKECADLW 129
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL23_AEDAE (60S ribosomal protein L23 OS=Aedes aegypti GN=RpL23-A PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 8.665e-60 Identity = 107/129 (82.95%), Postives = 121/129 (93.80%), Query Frame = 1 Query: 31 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 MSKRGRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V GI+GRLNRLP+A VGDM +ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGVF+YFEDNAGVIVN KGEMKGSAITGP+ KECADLW Sbjct: 1 MSKRGRGGSAGGKFRISLGLPVGAVINCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLW 129
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL23_DROME (60S ribosomal protein L23 OS=Drosophila melanogaster GN=RpL23 PE=1 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 4.300e-59 Identity = 106/129 (82.17%), Postives = 121/129 (93.80%), Query Frame = 1 Query: 31 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 MSKRGRGG+AG KFR+SLGLPV A +NCADNTGAKNLY+I+V GI+GRLNRLP+A VGDM +ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGVF+YFEDNAGVIVN KGEMKGSAITGP+ KECADLW Sbjct: 1 MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLW 129
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL23_SCHPO (60S ribosomal protein L23 OS=Schizosaccharomyces pombe GN=rpl23a PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 5.812e-56 Identity = 99/126 (78.57%), Postives = 114/126 (90.48%), Query Frame = 1 Query: 40 RGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 RGRG ++G K+RM+LGLPV A +NCADN+GAKNLYI+SV G RLNRLP+A GDMV+ATVKKGKPDLRKK+MPA++VRQRK WRRKDGV++YFEDNAGVIVNPKGEMKGSAITGP+ KECADLW Sbjct: 3 RGRGAASGTKYRMTLGLPVQAIMNCADNSGAKNLYIVSVFGTGARLNRLPAASCGDMVLATVKKGKPDLRKKIMPAIVVRQRKAWRRKDGVYLYFEDNAGVIVNPKGEMKGSAITGPVAKECADLW 128
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL23_CAEEL (60S ribosomal protein L23 OS=Caenorhabditis elegans GN=rpl-23 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 6.426e-55 Identity = 100/129 (77.52%), Postives = 116/129 (89.92%), Query Frame = 1 Query: 31 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 MSKRGRGG++G KFR+SLGLPV A +NCADNTGAKNL++ISV GI+GRLNRLPSA VGDM + +VKKGKP+LRKKV+ V++RQRK +RRKDG F+YFEDNAGVIVN KGEMKGSAITGP+ KECADLW Sbjct: 1 MSKRGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVISVYGIRGRLNRLPSAGVGDMFVCSVKKGKPELRKKVLQGVVIRQRKQFRRKDGTFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLW 129
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL23_YEAST (60S ribosomal protein L23 OS=Saccharomyces cerevisiae GN=RPL23A PE=1 SV=3) HSP 1 Score: 209.92 bits (533), Expect = 3.189e-54 Identity = 97/122 (79.51%), Postives = 111/122 (90.98%), Query Frame = 1 Query: 52 GSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 G+ G KFR+SLGLPV A +NCADN+GA+NLYII+VKG RLNRLP+A +GDMVMATVKKGKP+LRKKVMPA++VRQ K WRR+DGVF+YFEDNAGVI NPKGEMKGSAITGP+GKECADLW Sbjct: 5 GAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKKGKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECADLW 126
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL23_BRUMA (60S ribosomal protein L23 OS=Brugia malayi GN=RPL23 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 5.440e-54 Identity = 101/129 (78.29%), Postives = 116/129 (89.92%), Query Frame = 1 Query: 31 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 MSKRGRGG++G KFR+SLGLPV A +NCADNTGAKNL++I+V GIKGRLNRLPSA VGDM +A+VKKGKP+LRKKV+ AV+VRQRK +RR DG +YFEDNAGVIVN KGEMKGSAITGP+ KECADLW Sbjct: 1 MSKRGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVIAVSGIKGRLNRLPSAGVGDMFVASVKKGKPELRKKVLQAVVVRQRKQYRRIDGSSIYFEDNAGVIVNNKGEMKGSAITGPVTKECADLW 129
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL23_DICDI (60S ribosomal protein L23 OS=Dictyostelium discoideum GN=rpl23 PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 1.298e-47 Identity = 88/121 (72.73%), Postives = 107/121 (88.43%), Query Frame = 1 Query: 55 SAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 + G+ +R+SLGLPV A +N ADN+GAKNLY+I+VKGIKGRLNRLPSA VGDMVMATVKKGKP+LRKKV ++VRQRK W+RKDGV++YFEDNAGV+ NPKGE+KG+ I GP+ KEC+DLW Sbjct: 6 AVGSNYRVSLGLPVGAVMNSADNSGAKNLYVIAVKGIKGRLNRLPSAGVGDMVMATVKKGKPELRKKVCTGLVVRQRKHWKRKDGVYIYFEDNAGVMCNPKGEVKGN-ILGPVAKECSDLW 125
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL23_TRYCR (60S ribosomal protein L23 OS=Trypanosoma cruzi GN=RPL23 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.096e-41 Identity = 82/115 (71.30%), Postives = 97/115 (84.35%), Query Frame = 1 Query: 61 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKG-EMKGSAITGPIGKE 402 G +FR+SL LPV A VNCADNTGAKNLYIISVKG GRLNRLP+A +GD+VMA+VKKGKP+LR+KV+ AVI+RQRK WRRKDG +YFEDNAGVIVN +G + + S I GP+ KE Sbjct: 10 GCRFRVSLALPVGAVVNCADNTGAKNLYIISVKGYHGRLNRLPAAALGDIVMASVKKGKPELRRKVLNAVIIRQRKSWRRKDGTVIYFEDNAGVIVNSQGRDGRVSGIAGPVAKE 124 The following BLAST results are available for this feature:
BLAST of DN618068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 491
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN618068 ID=DN618068; Name=DN618068; organism=Citrus sinensis; type=EST; length=417bpback to top |