DN618068
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_STAMF (50S ribosomal protein L14P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.819e-33 Identity = 70/129 (54.26%), Postives = 94/129 (72.87%), Query Frame = 1 Query: 31 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 M K+G+G A ++ R++ GL V + V ADN+GAK + II V G KGRL R+P A +GD+V+ TVKKG P++RK+V+ AVIVRQ++P+RR DG ++ FEDNA IV P+G KGS I GPI KE A+ W Sbjct: 1 MPKKGKGKPAFSRRRIATGLQVGSYVRVADNSGAKLVKIIGVPGYKGRLRRIPPAGIGDLVVVTVKKGTPEMRKQVVKAVIVRQKRPFRRPDGTWVAFEDNAVAIVTPEGTPKGSEIRGPIAKEVAERW 129
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL23_ENCCU (60S ribosomal protein L23 OS=Encephalitozoon cuniculi GN=RPL23 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.540e-32 Identity = 62/117 (52.99%), Postives = 88/117 (75.21%), Query Frame = 1 Query: 67 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 +++M+ G+ V + CADN+GAK L I VK +GRLNRLP+A GD+ + +VKKGKP+LRKKV A+++RQ+K WRR DG + FEDNA V++N KGE++G+ I GP+ +E AD+W Sbjct: 19 RYKMTRGIQVETLMKCADNSGAKILRCIGVKRYRGRLNRLPAAAPGDICVVSVKKGKPELRKKVHYAILIRQKKIWRRTDGSHIMFEDNAAVLINNKGELRGAQIAGPVPREVADMW 135
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_THEAC (50S ribosomal protein L14P OS=Thermoplasma acidophilum GN=rpl14p PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.431e-32 Identity = 60/115 (52.17%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 73 RMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 R + GLP+ A + CADNTGA+++ +I VK G+ R+P+A VGDM MA+VKKG P++R KV+ AV++RQ++P+RR DG + FEDNA V+V P GE++GS I GP+ +E A+ W Sbjct: 7 RQTRGLPLGANITCADNTGARSISLIDVKAWHGKARRIPAAGVGDMFMASVKKGTPEMRSKVVYAVVIRQKRPYRRPDGTMVQFEDNAAVLVTPDGEVRGSEIKGPVAREAAERW 121
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_HYPBU (50S ribosomal protein L14P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl14p PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 5.852e-32 Identity = 67/126 (53.17%), Postives = 90/126 (71.43%), Query Frame = 1 Query: 40 RGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 +G G AG + ++ GL V + V ADN+GAK II V G KGRL R+P A VGDMV+ TVKKG P++RK+V+ A+++RQR+P+RR DG ++ FEDNA VIV+P G KGS I GP+ +E A+ W Sbjct: 3 KGAAG-AGPRRHIAAGLQVGSYVKVADNSGAKEAMIIGVIGYKGRLRRIPPAAVGDMVVVTVKKGTPEMRKQVVRAIVIRQRRPYRRPDGTWIAFEDNAVVIVSPDGTPKGSEIRGPVAREAAERW 127
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_THEVO (50S ribosomal protein L14P OS=Thermoplasma volcanium GN=rpl14p PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 9.983e-32 Identity = 62/122 (50.82%), Postives = 89/122 (72.95%), Query Frame = 1 Query: 52 GSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 G AG + R GLP+ A + CADNTGA+++ +I VK G+ R+P+A VGDM +A+VKKG P++R KV+ AV++RQ++P+RR DG + FEDNA V+V P GE++GS I GP+ +E A+ W Sbjct: 3 GIAGREIR---GLPLGANIVCADNTGARSISLIDVKAYHGKARRIPAAGVGDMFIASVKKGTPEMRSKVVYAVVIRQKRPYRRPDGTMVEFEDNAAVLVTPDGEVRGSEIKGPVAREAAERW 121
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_AERPE (50S ribosomal protein L14P OS=Aeropyrum pernix GN=rpl14p PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.224e-31 Identity = 66/129 (51.16%), Postives = 94/129 (72.87%), Query Frame = 1 Query: 31 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 M+K+ + G +++ ++ GL V + V ADN+GAK + IISV +K RL RLPSA VGD+V+ +VKKG P +R++V+ AV+VRQR+P+RR DG ++ FEDNA VIVNP G +GS + GPI +E A+ W Sbjct: 1 MAKKKKYGVVVSRYGVNTGLQVGSYVPVADNSGAKEVMIISVPQVKTRLRRLPSAGVGDLVVVSVKKGTPQMRRQVVYAVVVRQRRPFRRPDGTWVSFEDNAVVIVNPDGTPRGSEVRGPIAREAAERW 129
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_METKA (50S ribosomal protein L14P OS=Methanopyrus kandleri GN=rpl14p PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.905e-31 Identity = 66/110 (60.00%), Postives = 82/110 (74.55%), Query Frame = 1 Query: 88 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 LPV A + CADNTGA+ L II+VKG KG RLP+A +GDMV+ +VK+G PD+RK+V+ AVIVRQRK +RR DG + FEDNA VIV P G +GS I GP+ KE A+ W Sbjct: 13 LPVGARLVCADNTGARELQIIAVKGYKGVRRRLPNAGIGDMVVCSVKEGTPDMRKEVVNAVIVRQRKEYRRPDGTRVKFEDNAAVIVTPDGAPRGSEIRGPVAKEAAERW 122
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_METTH (50S ribosomal protein L14P OS=Methanobacterium thermoautotrophicum GN=rpl14p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.442e-30 Identity = 64/115 (55.65%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 73 RMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 +++ LPV A + C DNTGA+ + IISV+G KG RL +A VGDMV+ +VKKG D+R++V+ AVIVRQ+K +RR DG+ + FEDNA VIV+P+G +KGS I GP+ KE AD W Sbjct: 7 KVTRALPVGARLQCVDNTGAREVEIISVRGYKGVRRRLAAAGVGDMVVVSVKKGTVDMRREVLNAVIVRQKKEYRRPDGLRVKFEDNAAVIVSPEGVLKGSEIRGPVAKEAADRW 121
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_METST (50S ribosomal protein L14P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl14p PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.459e-30 Identity = 65/114 (57.02%), Postives = 82/114 (71.93%), Query Frame = 1 Query: 76 MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 +S LP+ A + C DNTGA+ + IISVKG KG RL SA VGDMV+ +VKKG D+R++V AV+VRQ+K +RR DG+ + FEDNA VI+ G +KGS I GPI KE ADLW Sbjct: 8 VSKSLPIGARLKCIDNTGAREVEIISVKGFKGVRRRLASAGVGDMVVISVKKGTADMRREVTTAVVVRQKKEYRRADGLRVKFEDNAAVIITEDGVLKGSEIRGPIAKEAADLW 121
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_METS3 (50S ribosomal protein L14P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl14p PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.459e-30 Identity = 61/114 (53.51%), Postives = 84/114 (73.68%), Query Frame = 1 Query: 76 MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 +S LP+ AT+ C DNTGA+ + IISVKG KG RL A VGD+V+A+VKKG D+R++V+ AV++RQ+K + R DG+ + FEDNA VI+ P+G +KGS + GP+ KE AD W Sbjct: 8 VSKALPIGATLQCVDNTGAREIQIISVKGFKGVRRRLDVAGVGDLVVASVKKGTADMRREVVNAVVIRQKKEYMRADGLRVKFEDNAAVIITPEGILKGSEVRGPVAKEAADRW 121 The following BLAST results are available for this feature:
BLAST of DN618068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 491
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618068 ID=DN618068; Name=DN618068; organism=Citrus sinensis; type=EST; length=417bpback to top |