DN618068
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_METM6 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl14p PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.719e-29 Identity = 60/110 (54.55%), Postives = 79/110 (71.82%), Query Frame = 1 Query: 88 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 LP A + CADNTGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ W Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERW 121
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_METM5 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl14p PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.551e-29 Identity = 60/110 (54.55%), Postives = 79/110 (71.82%), Query Frame = 1 Query: 88 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 LP A + CADNTGAK L +I+VK G + RLP+ VG MV +VKKG P++RK+V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ W Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERW 121
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_PYRHO (50S ribosomal protein L14P OS=Pyrococcus horikoshii GN=rpl14p PE=3 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 6.056e-29 Identity = 64/130 (49.23%), Postives = 90/130 (69.23%), Query Frame = 1 Query: 31 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 M+K+G G + G + R + +P+ A + ADN+GAK + +I V G RL SA VGDMV+ATVKKG+PD+R +V+ AVI+RQRK +RR DG+ + FEDNA VIV P+G +G+ I GP+ +E A+ W Sbjct: 1 MAKKGAGATRGISPVRPTRAIPIGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRGPVAREAAEKW 130
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_PYRAB (50S ribosomal protein L14P OS=Pyrococcus abyssi GN=rpl14p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.056e-29 Identity = 65/130 (50.00%), Postives = 89/130 (68.46%), Query Frame = 1 Query: 31 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 M+K+G G + G R + +PV A + ADN+GAK + +I V G RL SA VGDMV+ATVKKG+PD+R +V+ AVI+RQRK +RR DG+ + FEDNA VIV P+G +G+ I GP+ +E A+ W Sbjct: 1 MAKKGAGATRGITPVRPTRAIPVGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRIKFEDNAAVIVTPEGVPRGTEIRGPVAREAAERW 130
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_CENSY (50S ribosomal protein L14P OS=Cenarchaeum symbiosum GN=rpl14p PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.127e-28 Identity = 67/129 (51.94%), Postives = 88/129 (68.22%), Query Frame = 1 Query: 40 RGRGGSAG-NKFR--MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 R RG + G +FR ++ LPV A V CADN+GAK L II V+ K R++RLP+A VGD V VKKG +LRK+V AVI+RQ+ P RR +GV + FEDNA V+ P+GEMKG+ I GP+ E ++ W Sbjct: 5 RSRGKAKGVEEFRPYVTRALPVGARVTCADNSGAKVLEIIMVQKAKTRVSRLPAAAVGDYVNVVVKKGPAELRKQVHGAVIIRQKYPVRRLNGVRVAFEDNAAVLTTPEGEMKGTDIKGPVAAEASEKW 133
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_SULTO (50S ribosomal protein L14P OS=Sulfolobus tokodaii GN=rpl14p PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.696e-28 Identity = 62/119 (52.10%), Postives = 81/119 (68.07%), Query Frame = 1 Query: 61 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 G++ ++ GL TV ADN+GAK II + G KG L R+P A + D+VM +V+KG P++RK+ AVIVRQR P+RR DG ++ FEDNA VIVNP G KG+ I GPI KE A+ W Sbjct: 12 GSRKGLTPGLQHYTTVTVADNSGAKEAVIIGIYGYKGVLRRIPFANIADLVMVSVRKGTPEVRKQKFKAVIVRQRMPFRRPDGTWIAFEDNAVVIVNPDGTPKGTEIRGPIAKEAAERW 130
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_ARCFU (50S ribosomal protein L14P OS=Archaeoglobus fulgidus GN=rpl14p PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.745e-28 Identity = 62/108 (57.41%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 88 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 411 LP A + CADNTGA+ L II+VKG KG R P+A VGD+V+ TVKKG P++RK+V AVIVRQRK +RR DG + FEDNA VI N +GE +GS I G + +E A+ Sbjct: 12 LPTGARLVCADNTGARELEIIAVKGYKGVRRRYPAAGVGDIVVVTVKKGTPEIRKQVHYAVIVRQRKEYRRPDGTRVKFEDNAAVITNERGEPRGSEIRGAVAREAAE 119
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_IGNH4 (50S ribosomal protein L14P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl14p PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.492e-27 Identity = 62/123 (50.41%), Postives = 83/123 (67.48%), Query Frame = 1 Query: 55 SAGNKFRMSL--GLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 ++ NK R + GL V + V DN+GAK II V G GRL R+P A VGDMV+ TVKKG P++R +V+ A++VRQRKP+RR DG ++ FEDNA VIV+ G +GS I GP+ +E + W Sbjct: 4 ASANKSRRKVVTGLQVGSYVKVTDNSGAKVAMIIGVPGYHGRLRRIPPAGVGDMVVVTVKKGTPEMRHQVVRAIVVRQRKPFRRPDGTWVAFEDNAVVIVSEDGTPRGSEIRGPVAREAVERW 126
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_METS5 (50S ribosomal protein L14P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl14p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.544e-27 Identity = 57/104 (54.81%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 106 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 VN +DN+GAK IISV G +G L R+P A VGD+VM +V+KG PD+RK+ AV++RQR P+RR DG ++ F+DNA VIVNP G KG+ I GP+ +E A+ W Sbjct: 24 VNVSDNSGAKEAMIISVFGYRGALRRVPYANVGDLVMVSVRKGAPDVRKQKFKAVVIRQRMPFRRPDGTWISFDDNAVVIVNPDGTAKGTEIRGPVAREAAERW 127
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_METTP (50S ribosomal protein L14P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl14p PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.403e-27 Identity = 56/117 (47.86%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 61 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 411 GNK ++ + + CADNTGA+ L+++SVK +G NR P A +GDMV+ +VKKG P++RK++ AVI+RQ+K +RR DG+ + FEDNA VI + G KGS I GP+ +E A+ Sbjct: 3 GNKAKIPRSINTGTYLECADNTGARTLFVVSVKKYRGVKNRQPCAGIGDMVVVSVKKGTPEMRKQIFNAVIIRQKKEFRRPDGLRVKFEDNAAVITDDAGVPKGSEIKGPVAREVAE 119 The following BLAST results are available for this feature:
BLAST of DN618068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 491
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618068 ID=DN618068; Name=DN618068; organism=Citrus sinensis; type=EST; length=417bpback to top |