DN618068
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_THEPD (50S ribosomal protein L14P OS=Thermofilum pendens (strain Hrk 5) GN=rpl14p PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.263e-26 Identity = 60/131 (45.80%), Postives = 89/131 (67.94%), Query Frame = 1 Query: 31 MSKRGRGGSAGNKFRMSL--GLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 M+KRG + G +R+ L G+ + + V ADN+GA +I V K R+P A VGD+V+ +++ GKP+LRK+VM A+++RQR+P+RR DG ++ FEDNA VI+ P+GE KG+ I GP+ KE A+ W Sbjct: 1 MAKRGPK-TVGVSYRLGLTPGVFMESLVKVADNSGATLAKVIGVPHYKAVWRRIPGAAVGDIVIVSIRAGKPELRKQVMRAIVIRQRRPYRRPDGSWIAFEDNAVVIITPEGEPKGTEIRGPLAKEAAERW 130
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_SULSO (50S ribosomal protein L14P OS=Sulfolobus solfataricus GN=rpl14p PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.263e-26 Identity = 58/119 (48.74%), Postives = 80/119 (67.23%), Query Frame = 1 Query: 61 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 G++ ++ L + VN ADN+G K II V G +G L R+P A + DMVM ++KKG P++RK+ AVIVRQR P+RR DG ++ FEDNA VI+NP G KG+ + GPI +E A+ W Sbjct: 9 GSRKGLTPALQHYSVVNVADNSGGKEAMIIGVYGYRGVLRRVPFANIADMVMVSIKKGTPEVRKQKFRAVIVRQRMPYRRPDGTWISFEDNAVVIINPDGTPKGTEVRGPIAREAAERW 127
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_HALSA (50S ribosomal protein L14P OS=Halobacterium salinarium GN=rpl14p PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.267e-26 Identity = 57/115 (49.57%), Postives = 79/115 (68.70%), Query Frame = 1 Query: 67 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 411 K ++ GL + + CADNTGA+ L I SV G +GR NR P A +GD + +V KG P++R++V+ AV+VRQRKP RR DG + FEDNA VI++ GE +G+ I GPI +E A+ Sbjct: 5 KADITQGLEKGSLITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISREVAE 119
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_HALS3 (50S ribosomal protein L14P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.267e-26 Identity = 57/115 (49.57%), Postives = 79/115 (68.70%), Query Frame = 1 Query: 67 KFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 411 K ++ GL + + CADNTGA+ L I SV G +GR NR P A +GD + +V KG P++R++V+ AV+VRQRKP RR DG + FEDNA VI++ GE +G+ I GPI +E A+ Sbjct: 5 KADITQGLEKGSLITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISREVAE 119
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_SULAC (50S ribosomal protein L14P OS=Sulfolobus acidocaldarius GN=rpl14p PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.185e-26 Identity = 55/106 (51.89%), Postives = 75/106 (70.75%), Query Frame = 1 Query: 100 ATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 ++V ADN+GAK II + G +G L R+P A + D+VM +V+KG PD+RK+ AVIVRQR P+RR DG ++ FEDNA VI+NP G KG+ + GPI +E A+ W Sbjct: 22 SSVVVADNSGAKEAVIIGIYGYRGVLRRVPFANIADLVMVSVRKGSPDVRKQKFKAVIVRQRMPFRRPDGTWISFEDNAVVIINPDGTPKGTEVRGPIAREAAERW 127
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_METBU (50S ribosomal protein L14P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl14p PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.069e-25 Identity = 56/117 (47.86%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 61 GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 411 G + ++ L A + C DNTGA+ + IISVK +G NR+P +GDM + +VKKG P++RK+++ AVIVRQ+K +RR DG+ + FEDNA VIV+ KG KG+ I GP+ +E A+ Sbjct: 3 GIRSKIPRALNAGAKIECVDNTGARTVEIISVKKYRGVKNRMPKGGIGDMCVVSVKKGTPEMRKQILYAVIVRQKKEFRRPDGIRVAFEDNAVVIVDDKGIPKGTDIKGPVAREAAE 119
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_CALMQ (50S ribosomal protein L14P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl14p PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.396e-25 Identity = 59/133 (44.36%), Postives = 90/133 (67.67%), Query Frame = 1 Query: 31 MSKRGRGGSAGNKFRMSL--GLPVAATVNCADNTGAKNLYIISVKG--IKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 M+KRG + G +R L G+ + + VN ADN+GAK + +I V G K R+P VGDMV+ +V++GKP++RK+++ A++VRQR+P+RR DG ++ FEDNA VIV +G++KG+ + GP+ E A W Sbjct: 1 MAKRGGPRTVGVPWRFHLTPGIFMNSLVNVADNSGAKVVKVIGVVGHYSKNVHRRIPGVSVGDMVVVSVQEGKPEMRKQILRAIVVRQRRPFRRPDGTWVAFEDNAVVIVTEEGQVKGTEVHGPVAMEAAQRW 133
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_NITMS (50S ribosomal protein L14P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.110e-25 Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 1 Query: 88 LPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 +PV A + CADN+GAK L +I+V + R +RLPSA VGD VKKG +LRK+V AVI+RQ+ P RR +GV + FEDNA V++ P+GE KG+ I GP+ E ++ W Sbjct: 20 IPVGANIVCADNSGAKILEVINVPRHRTRASRLPSASVGDFCNVVVKKGPAELRKQVYGAVIIRQKYPVRRLNGVRVCFEDNAAVLITPEGETKGTDIKGPVAAEASEKW 129
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_PYRCJ (50S ribosomal protein L14P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.062e-25 Identity = 61/133 (45.86%), Postives = 88/133 (66.17%), Query Frame = 1 Query: 31 MSKRGRGGSAG--NKFRMSLGLPVAATVNCADNTGAKNLYIISVKG--IKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 M+KRG + G +F ++ G+ + + V ADN+GAK + +I V G K R+P A VGDMV+ V++GKP+LRK++ A++VRQR+P+RR DG ++ FEDNA VIV P+G+ KGS I GP+ E W Sbjct: 1 MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKSVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRW 133
BLAST of DN618068 vs. ExPASy Swiss-Prot
Match: RL14_PYRAE (50S ribosomal protein L14P OS=Pyrobaculum aerophilum GN=rpl14p PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.306e-25 Identity = 60/133 (45.11%), Postives = 88/133 (66.17%), Query Frame = 1 Query: 31 MSKRGRGGSAG--NKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRL--NRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLW 417 M+KRG + G +F ++ G+ + + V ADN+GAK + +I V G + R+P A VGDMV+ V++GKP+LRK++ A++VRQR+P+RR DG ++ FEDNA VIV P+G+ KGS I GP+ E W Sbjct: 1 MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRW 133 The following BLAST results are available for this feature:
BLAST of DN618068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 491
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618068 ID=DN618068; Name=DN618068; organism=Citrus sinensis; type=EST; length=417bpback to top |