DN618063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_PSEFS (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas fluorescens (strain SBW25) GN=dxs PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15 Identity = 46/104 (44.23%), Postives = 60/104 (57.69%), Query Frame = -1 Query: 286 LAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 594 LA + ++ I TV D RF KPLD L+R++A HE+L+TVEE ++ GG G+ V FL IL L L LPD Y++H PA L E GL I A+V Sbjct: 523 LAEALKVAEKIDATVVDMRFVKPLDEALVREIAGGHELLVTVEENAIMGGAGAAVSEFLARENILKSVLHLG---LPDVYVEHAKPAQMLAECGLDEAGIEASV 623
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_PSEF5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=dxs PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15 Identity = 47/112 (41.96%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 271 LAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV---LSLLG 594 LA + ++ + TV D RF KPLD L+R++A+ HE+L+T+EE ++ GG G V +L IL L L LPD Y++H PA L E GL I A+V L+LLG Sbjct: 523 LAEALQVAEKLDATVVDMRFVKPLDEALVREIASSHELLVTIEENAIMGGAGGAVSEYLARENILKPILHLG---LPDAYVEHAKPAQMLAECGLDEAGIEASVRQRLALLG 631
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_RALEH (1-deoxy-D-xylulose-5-phosphate synthase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=dxs PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.312e-15 Identity = 46/102 (45.10%), Postives = 66/102 (64.71%), Query Frame = -1 Query: 271 SQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 573 ++ + VAD RF KPLD +L+++LA E++ L+TVEEGSV GG GS V L +GI D P + ++ LPDR++DHG PA L++ GL + I +V G Sbjct: 527 AEALDAAVADMRFVKPLDVELVKRLAAENDYLVTVEEGSVMGGAGSAVLEALAEAGI-DKP--VLTLGLPDRFVDHGDPAYLLQQCGLDAAGIERSVRERFG 625
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_PSESM (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas syringae pv. tomato GN=dxs PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.312e-15 Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = -1 Query: 271 LAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV---LSLLG 594 LA ++ ++ + TV D RF KPLD L+R+ A HE+L+T+EE +V GG G+ V FL + IL L L LPD Y++H PA L E GL + I A + L+L+G Sbjct: 523 LAEALVVAEKLDATVIDMRFVKPLDEALVRETAASHELLVTLEENAVMGGAGAAVSEFLARANILKSVLHLG---LPDVYVEHAKPAQMLAECGLDAEGIEAAINERLALIG 631
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_PSEPG (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas putida (strain GB-1) GN=dxs PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.588e-14 Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = -1 Query: 268 LAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 594 LA M ++ I+ TV D RF KPLD L+ +LA HE+L+T+EE ++ GG G+ V FL +L L L LPD Y++H PA L E GL + I A+V + + + Sbjct: 522 LAEAMQVAEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQAVLKPLLHLG---LPDIYVEHAKPAQMLAECGLDAAGIEASVKARMAK 628
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_PSEPF (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas fluorescens (strain Pf0-1) GN=dxs PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.588e-14 Identity = 46/113 (40.71%), Postives = 63/113 (55.75%), Query Frame = -1 Query: 268 LAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV---LSLLGR 594 +A + ++ + TV D RF KP+D L+R++AN H++L+T+EE ++ GG G V FL IL L L LPD Y++H PA L E GL I A V L LL R Sbjct: 523 MAEALKVAETLDATVVDMRFVKPMDEALVREIANSHDLLVTIEENAIMGGAGGAVSEFLARENILKSVLHLG---LPDVYVEHAKPAQMLAECGLDEVGIEAAVRERLELLNR 632
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_PSEP1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=dxs PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.074e-14 Identity = 45/104 (43.27%), Postives = 61/104 (58.65%), Query Frame = -1 Query: 286 LAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 594 LA M ++ I+ TV D RF KPLD L+ +LA HE+L+T+EE ++ GG G+ V FL +L L L LPD Y++H PA L E GL + I A+V Sbjct: 522 LAEAMQVAEQINATVVDMRFVKPLDEALVLELAGSHELLVTIEENAIMGGAGAAVGEFLASQAVLKPLLHLG---LPDIYVEHAKPAQMLAECGLDAAGIEASV 622
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_PSE14 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=dxs PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.709e-14 Identity = 46/112 (41.07%), Postives = 66/112 (58.93%), Query Frame = -1 Query: 271 LAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV---LSLLG 594 LA ++ ++ + TV D RF KPLD L+ + A HE+L+T+EE +V GG G+ V FL + IL L L LPD Y++H PA L E GL ++ I A + L+L+G Sbjct: 522 LADALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARANILKSVLHLG---LPDTYVEHAKPAQMLAECGLDAQGIEAAINERLALIG 630
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_METPP (1-deoxy-D-xylulose-5-phosphate synthase OS=Methylibium petroleiphilum (strain PM1) GN=dxs PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.709e-14 Identity = 43/106 (40.57%), Postives = 63/106 (59.43%), Query Frame = -1 Query: 259 SQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKE 573 ++ + TVA+ RF KPLDT+L+ LA HE L+TVEEG + GG GS V L +G+ L + ++ LPD +++HG PA L + GL + I ++L G E Sbjct: 521 AEKLDATVANMRFIKPLDTELVLSLARSHEALVTVEEGCLQGGAGSAVLEALQAAGV---NLPVLTLGLPDEFVEHGDPAKLLAQLGLDAAGIEQSILKRFGAKLE 623
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_BURS3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia sp. (strain 383) GN=dxs PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 2.709e-14 Identity = 43/105 (40.95%), Postives = 65/105 (61.90%), Query Frame = -1 Query: 286 VLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 597 ++A ++ ++++ TVA+ RF KP+D L+R+LA H+ L+TVEEG V GG GS L SG++ L+L LPD +IDHG PA L + GL I+ ++ Sbjct: 514 MVAPSLAAAEELDATVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGSACVEALMESGVIRPVLQLG---LPDLFIDHGDPAKLLSQCGLDGAGIAKSI 615 The following BLAST results are available for this feature:
BLAST of DN618063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 189
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618063 ID=DN618063; Name=DN618063; organism=Citrus sinensis; type=EST; length=597bpback to top |