DN618052

Overview
NameDN618052
Unique NameDN618052
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.081e-20
Identity = 60/133 (45.11%), Postives = 81/133 (60.90%), Query Frame = 1
Query:  325 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESG-IVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 717
            L F  +  ++ K Y S+EE   R   F  N   I + N    +++LGLN+F+D S++E +   L +  QNCSAT KGN+       P + DWR+ G  VSPVK+QG CGSCWTFSTTG+LE+A   A GK +S
Sbjct:   33 LHFKSWMVQHQKKY-SLEEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHKYLWSEPQNCSAT-KGNYLRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLS 163          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.549e-20
Identity = 57/128 (44.53%), Postives = 80/128 (62.50%), Query Frame = 1
Query:  331 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESG-IVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGK 708
            F  +  ++ K Y S EE   R   F+ NL  I + N +  ++++GLN+F+D S++E +R  L +  QNCSAT K N+       P + DWR+ G  V+PVK+QG CGSCWTFSTTG+LE+A   A GK
Sbjct:   35 FQSWMVQHQKKYSS-EEYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDELKRKYLWSEPQNCSAT-KSNYLRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGK 160          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20
Identity = 53/132 (40.15%), Postives = 73/132 (55.30%), Query Frame = 1
Query:  322 ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK--GNH--KLTADV--LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQA 699
            A  F  F R YG+ YE++ E + R A F +NL+L+R    +    + G+ KF D S  EF    L  A   +A  +    H  K  AD+  +P+  DWRE G V+PVKDQG CGSCW FS  G++E  ++ A
Sbjct:   35 AALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLA 166          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20
Identity = 53/132 (40.15%), Postives = 73/132 (55.30%), Query Frame = 1
Query:  322 ALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTK--GNH--KLTADV--LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQA 699
            A  F  F R YG+ YE++ E + R A F +NL+L+R    +    + G+ KF D S  EF    L  A   +A  +    H  K  AD+  +P+  DWRE G V+PVKDQG CGSCW FS  G++E  ++ A
Sbjct:   35 AALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLA 166          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19
Identity = 53/131 (40.46%), Postives = 69/131 (52.67%), Query Frame = 1
Query:  331 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHK--LTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 717
            F  F  ++ K Y + EE   RF  F  NL   +    +  +   G+ KF+D +  EF+R  LG  +             L    LPE  DWRE G V+PVKDQG CGSCW FSTTG+LE A++ A GK +S
Sbjct:   48 FTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLKKRLRLPAHAQKAPILPTTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVS 178          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19
Identity = 55/128 (42.97%), Postives = 79/128 (61.72%), Query Frame = 1
Query:  331 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESG-IVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGK 708
            F  + +++ K Y S  E   R   F+ N   I++ N +  ++++GLN+F+D S+ E +   L +  QNCSAT K N+       P + DWR+ G +VSPVK+QG CGSCWTFSTTG+LE+A   A GK
Sbjct:   33 FTSWMKQHQKTYSS-REYSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYLWSEPQNCSAT-KSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGK 158          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.349e-19
Identity = 52/122 (42.62%), Postives = 69/122 (56.56%), Query Frame = 1
Query:  331 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKL-----TADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 681
            F  +   + K YE+VEE  LRF  F  NL  I  TN KG SY LGLN+FAD S EEF++  LG   +     +            + +P++ DWR+ G V+ VK+QG CGSCW FST  ++E
Sbjct:   51 FENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDEERSYAEFAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVE 172          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 94.3597 bits (233), Expect = 6.693e-19
Identity = 57/131 (43.51%), Postives = 78/131 (59.54%), Query Frame = 1
Query:  331 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESG-IVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 717
            F  +  ++ K Y S EE   R  TF+ N   I + N    ++++ LN+F+D S+ E +   L +  QNCSAT K N+       P + DWR+ G  VSPVK+QG CGSCWTFSTTG+LE+A   A GK +S
Sbjct:   35 FKSWMSKHRKTY-STEEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSAT-KSNYLRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLS 163          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 53/141 (37.59%), Postives = 77/141 (54.61%), Query Frame = 1
Query:  298 QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATT-KGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 717
            Q   + ++  +F  +   + K Y S EE   R+  F  N+D ++  N KG    LGLN FAD + EE++   LG   + S+       K+       +KDWR  G V+PVK+QG CG CW+FSTTGS E A+ Q+ G+ +S
Sbjct:   19 QQFSELQYRNAFTDWMITHQKSYTS-EEFGARYNIFKANMDYVQQWNSKGSETVLGLNNFADITNEEYRNTYLGTKFDASSLIGTQEEKVFTTSSAASKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVS 158          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 55/131 (41.98%), Postives = 80/131 (61.07%), Query Frame = 1
Query:  331 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESG-IVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 717
            F  + +++ K Y SVE    R   F+ N   I++ N +  ++++ LN+F+D S+ E +   L +  QNCSAT K N+       P + DWR+ G +VSPVK+QG C SCWTFSTTG+LE+A   A GK +S
Sbjct:   33 FKSWMKQHQKTYSSVE-YNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKHKFLWSEPQNCSAT-KSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLS 161          
The following BLAST results are available for this feature:
BLAST of DN618052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
CATH_PIG2.081e-2045.11Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATH_BOVIN3.549e-2044.53Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
LMCPB_LEIME6.053e-2040.15Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP2_LEIPI6.053e-2040.15Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CYSP_PEA1.033e-1940.46Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CATH_RAT1.033e-1942.97Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
XCP2_ARATH1.349e-1942.62Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CATH_HUMAN6.693e-1943.51Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CYSP5_DICDI8.741e-1937.59Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CATH_MOUSE8.741e-1941.98Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_02A18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618052 ID=DN618052; Name=DN618052; organism=Citrus sinensis; type=EST; length=719bp
ATATAATTGAGATGAATTATGTAAGTTACATTGAAGATAACTTAGCACTT
GCCGAATAATAATAGTGTTCATAGACTGCATTCATTTAATCCGAAGCCCT
TGAGTGCAGTGTGCTCTCTCCAAACAAAGCAGACACAATCATTAGGCATG
GCTCGCCCCGTACAGTTGGTCTCGTCCGTCATCTTGTTGCTTTGCTGCGC
TGCCGCAGCATCAGCATCAGCATCAAGCTTCGACGACTCCAATCCGATCA
GATTGGTATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTCCTCCAG
GTGATCGGCCAAGCCCGCCATGCTCTCTCCTTTGCCCGTTTTGCTCGCAG
GTATGGGAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGTTCGCGA
CTTTCTCCAAGAACTTGGATTTAATCAGATCTACCAATTGTAAAGGCCTA
TCTTACAGGCTCGGGTTGAACAAGTTTGCTGACTGGAGCTGGGAAGAGTT
CCAAAGGCACAGGTTGGGAGCTGCGCAAAACTGCTCTGCCACTACAAAAG
GAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACTGGAGG
GAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGATCTTG
CTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCACCAGGCCT
TTGGAAAGGGTATCTCTTT
back to top