DN618052

Overview
NameDN618052
Unique NameDN618052
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 79.7221 bits (195), Expect = 1.706e-14
Identity = 44/114 (38.60%), Postives = 58/114 (50.88%), Query Frame = 1
Query:  349 RYGKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 681
            +YGK Y S+ E + RF  F + L  I   N     SY++GLN+FAD + EEF+   L      + T   N        VLP   DWR +G V  +K QG CG CW FS   ++E
Sbjct:   48 KYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVE 161          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.800e-14
Identity = 52/141 (36.88%), Postives = 71/141 (50.35%), Query Frame = 1
Query:  331 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYR----LGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL--------PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 717
            F  F  ++ K Y S EE   RF  F  NL  I   N   ++++     G+NKFAD S +EF+ + L    N       +    AD L        P   DWR  G V+PVK+QG CGSCW+FSTTG++E  +  +  K +S
Sbjct:   29 FLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYL----NNKEAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVS 164          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.800e-14
Identity = 48/135 (35.56%), Postives = 69/135 (51.11%), Query Frame = 1
Query:  349 RYGKIYESVEEMKLRFATFSKNLDLIRSTN---CKG-LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV--------LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 717
            ++ K Y +  E + R   F++N   I   N    +G +SY+LGLNK+AD    EF+    G         +    L            +P++ DWRE G V+ VKDQGHCGSCW FS+TG+LE  + +  G  +S
Sbjct:   34 QHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVS 168          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.964e-14
Identity = 46/124 (37.10%), Postives = 69/124 (55.65%), Query Frame = 1
Query:  349 RYGKIYESVEEMKLRFATFSKNLDLIRSTNCK-GLS---YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGK 708
            +Y K Y  VEE +L+ A + +NL +I+  N + GL    + + +N FAD + EEF++         + T     K  +  LP  KDWR+ G V+PV++QG CGSCW F+  G++E    Q F K
Sbjct:   35 KYAKSYSPVEE-ELKRAVWEENLKMIQLHNKENGLGKNGFTMEMNAFADTTGEEFRKSLSDILIPAAVTNPSAQKQVSIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEG---QMFSK 154          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.964e-14
Identity = 45/124 (36.29%), Postives = 63/124 (50.81%), Query Frame = 1
Query:  331 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL---SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH-KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAY 690
            F  F   Y + YES EE + R + F  N+  +R+   + L   + + G+ KF+D + EEF+   L          K    K   D+ P   DWR  G V+ VKDQG CGSCW FS TG++E  +
Sbjct:  187 FKNFVITYNRTYESKEEARWRLSVFVNNM--VRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQW 308          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.467e-14
Identity = 46/125 (36.80%), Postives = 67/125 (53.60%), Query Frame = 1
Query:  358 KIYESVEEMKLRFATFSKNLDLIRSTNC-KGLSYRLGLNKFADWSWEEFQ----RHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 717
            K Y  + E + RF  F  NL  +   N     ++ +GL +FAD + EEF+    R ++   ++   T +  +K   DVLP+  DWR +G V  VKDQG+CGSCW FS  G++E       G+ IS
Sbjct:   53 KNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKTERYLYK-EGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELIS 176          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.467e-14
Identity = 46/124 (37.10%), Postives = 65/124 (52.42%), Query Frame = 1
Query:  331 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL---SYRLGLNKFADWSWEEFQRHRLGAA-QNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAY 690
            F  F   Y + YES EE + R   F++N+  IR+   + L   + + G+ KF+D + EEF    L    Q  S       K   D+ P   DWR+ G V+ VK+QG CGSCW FS TG++E  +
Sbjct:  165 FKDFMTTYNRTYESREEAQWRLTVFARNM--IRAQKIQALDRGTAQYGITKFSDLTEEEFHTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQW 286          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.106e-13
Identity = 42/125 (33.60%), Postives = 61/125 (48.80%), Query Frame = 1
Query:  328 SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAY 690
            S+  F  +YG+ Y   +E   R   F +N  LI   N K     +++++ +N+F D + EEF     G  +      K      A  +    DWR   +V+PVKDQ  CGSCW FS TG+LE  +
Sbjct:   19 SWDHFKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNAVMKGYKKGSRGEPKAVFTAEAGPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQH 143          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.106e-13
Identity = 48/137 (35.04%), Postives = 70/137 (51.09%), Query Frame = 1
Query:  331 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL------------SYRLGLNKFADWSWEEFQRHRLGAAQNCSA--TTKGNH--KLTADV-LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAY 690
            F  F ++Y K Y+  +E + R+  F  NL+ I S N + L            S + G+NKF+D + +E      G   N S   T   N   K   D+ LP+  DWR++  V+P+KDQG CGSCW F   G++E+ Y
Sbjct:   57 FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTLCENRIVKGAPDIRLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQY 193          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.886e-13
Identity = 45/119 (37.82%), Postives = 63/119 (52.94%), Query Frame = 1
Query:  346 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN-HKLTADV------LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 681
            R +  +  S+ E   RF  F  NL  + +TN     Y+L LNKFAD +  EF+    G+  N     +G  H+  A +      +P + DWR+ G V+ VKDQG CGSCW FST  ++E
Sbjct:   44 RSHHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVE 162          
The following BLAST results are available for this feature:
BLAST of DN618052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
ACTN_ACTCH1.706e-1438.60Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CYSP1_DICDI3.800e-1436.88Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATL_SARPE3.800e-1435.56Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CATJ_RAT4.964e-1437.10Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CATF_HUMAN4.964e-1436.29Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CPR1_ARATH8.467e-1436.80Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CATF_MOUSE8.467e-1437.10Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CYSP3_HOMAM1.106e-1333.60Digestive cysteine proteinase 3 OS=Homarus america... [more]
CATV_NPVHZ1.106e-1335.04Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CYSEP_PHAVU1.886e-1337.82Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02A18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618052 ID=DN618052; Name=DN618052; organism=Citrus sinensis; type=EST; length=719bp
ATATAATTGAGATGAATTATGTAAGTTACATTGAAGATAACTTAGCACTT
GCCGAATAATAATAGTGTTCATAGACTGCATTCATTTAATCCGAAGCCCT
TGAGTGCAGTGTGCTCTCTCCAAACAAAGCAGACACAATCATTAGGCATG
GCTCGCCCCGTACAGTTGGTCTCGTCCGTCATCTTGTTGCTTTGCTGCGC
TGCCGCAGCATCAGCATCAGCATCAAGCTTCGACGACTCCAATCCGATCA
GATTGGTATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTCCTCCAG
GTGATCGGCCAAGCCCGCCATGCTCTCTCCTTTGCCCGTTTTGCTCGCAG
GTATGGGAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGTTCGCGA
CTTTCTCCAAGAACTTGGATTTAATCAGATCTACCAATTGTAAAGGCCTA
TCTTACAGGCTCGGGTTGAACAAGTTTGCTGACTGGAGCTGGGAAGAGTT
CCAAAGGCACAGGTTGGGAGCTGCGCAAAACTGCTCTGCCACTACAAAAG
GAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACTGGAGG
GAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGATCTTG
CTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCACCAGGCCT
TTGGAAAGGGTATCTCTTT
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