DN618052

Overview
NameDN618052
Unique NameDN618052
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12
Identity = 40/115 (34.78%), Postives = 63/115 (54.78%), Query Frame = 1
Query:  349 RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 681
            +Y K Y   EE  LR A + +N+ +I+  N +      ++ + +NKF D + EEF++         + T        +  LP+ KDWRE G V+PV++QG CGSCW F+  G++E
Sbjct:   35 KYAKSYSPKEEA-LRRAVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQTSEEFRKSIDNIPIPAAMTDPHAQNHVSIGLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIE 148          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.085e-12
Identity = 48/132 (36.36%), Postives = 66/132 (50.00%), Query Frame = 1
Query:  346 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLNKFADWSWEE----FQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 717
            + YGK Y+   E  +R   + KNL  +   N +   G+ SY LG+N   D + EE        R+      + T K N      +LP++ DWRE G V+ VK QG CG+CW FS  G+LEA      GK +S
Sbjct:   33 KTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPNQWQRNITYKSNPN---QMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVS 161          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12
Identity = 43/108 (39.81%), Postives = 55/108 (50.93%), Query Frame = 1
Query:  379 EMKLRFATFSKNLDLIRSTNCKG-LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN------HKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 681
            E   RF TF  N   I S N +G   YRL LN+F D    EF+   +G  +  + +   +        L    LP + DWR+ G V+ VKDQG CGSCW FST  S+E
Sbjct:   61 EKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVE 168          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12
Identity = 45/129 (34.88%), Postives = 61/129 (47.29%), Query Frame = 1
Query:  325 LSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADV-------LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAY 690
            L F +F  +Y K Y S +E K R+  F  N++ I + N +  S    +N+FAD +  E      G A   S     N   T  V        P   DWR    V+ VKDQG CG+CW F+  G+LE+ Y
Sbjct:   38 LYFEKFISQYNKQYSSEDEKKYRYNIFRHNIESINAKNSRNDSAVYKINRFADMTKNEVVNRHTGLA---SGDIGANFCETIVVDGPGQRQRPANFDWRNYNKVTSVKDQGMCGACWAFAGLGALESQY 163          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12
Identity = 43/108 (39.81%), Postives = 54/108 (50.00%), Query Frame = 1
Query:  379 EMKLRFATFSKNLDLIRSTNCKG-LSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN------HKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 681
            E   RF TF  N   I S N +G   YRL LN+F D    EF+   +G  +  +     +        L    LP + DWR+ G V+ VKDQG CGSCW FST  S+E
Sbjct:   61 EKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVE 168          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12
Identity = 44/134 (32.84%), Postives = 73/134 (54.48%), Query Frame = 1
Query:  331 FARFARRYGKIYESVEEMKLRFATFSKNL--DLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA---QNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 717
            + +F  +Y K Y   E+ ++RF  F  N+    +     +G S   G+  ++D + +EF R  L A+    +  + T  +     + +P+  DWRE G V+ VK+QG CGSCW FSTTG++E+ + +  GK +S
Sbjct:   20 YVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFVRG-SAIYGVTPYSDLTTDEFARTHLTASWVVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLS 151          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12
Identity = 46/132 (34.85%), Postives = 67/132 (50.76%), Query Frame = 1
Query:  334 ARFARRYGKIYESVEEMKLRFATFSKN---LDLIRSTNCKGL-SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 717
            A   R YG     + E + R A + KN   +DL      +G   +R+ +N F D + EEF++   G         K  H+     +P++ DW + G V+PVK+QG CGSCW FS TG+LE    +  GK +S
Sbjct:   34 ATHRRLYG-----MNEEEWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVS 160          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12
Identity = 44/133 (33.08%), Postives = 67/133 (50.38%), Query Frame = 1
Query:  331 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 717
            + ++   + ++Y   EE   R A + KN+ +I   N +      S+ + +N F D + EEF++   G         K   +      P + DWRE G V+PVK+QG CGSCW FS TG+LE    +  GK +S
Sbjct:   29 WTKWKAMHNRLYGMNEE-GWRRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVS 160          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12
Identity = 46/132 (34.85%), Postives = 67/132 (50.76%), Query Frame = 1
Query:  334 ARFARRYGKIYESVEEMKLRFATFSKN---LDLIRSTNCKGL-SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 717
            A   R YG     + E + R A + KN   +DL      +G   +R+ +N F D + EEF++   G         K  H+     +P++ DW + G V+PVK+QG CGSCW FS TG+LE    +  GK +S
Sbjct:   34 ATHRRLYG-----MNEEEWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVS 160          
BLAST of DN618052 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.646e-12
Identity = 45/132 (34.09%), Postives = 65/132 (49.24%), Query Frame = 1
Query:  334 ARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGIS 717
            A   R YG     + E   R A + KN+ +I   N +       + + +N F D + EEF++   G         K   +     +P++ DWRE G V+PVK+QG CGSCW FS TG+LE    +  GK +S
Sbjct:   34 ATHRRLYG-----MNEEGWRRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKMFQEPLFAEIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVS 160          
The following BLAST results are available for this feature:
BLAST of DN618052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
CATJ_MOUSE1.597e-1234.78Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CATS_SAIBB2.085e-1236.36Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CYSP2_HORVU2.724e-1239.81Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CATV_NPVMC2.724e-1234.88Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CYSP1_HORVU3.557e-1239.81Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
CATL_SCHMA3.557e-1232.84Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CATL2_BOVIN3.557e-1234.85Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATL1_CERAE3.557e-1233.08Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATL1_BOVIN3.557e-1234.85Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CATL1_CANFA4.646e-1234.09Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02A18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618052 ID=DN618052; Name=DN618052; organism=Citrus sinensis; type=EST; length=719bp
ATATAATTGAGATGAATTATGTAAGTTACATTGAAGATAACTTAGCACTT
GCCGAATAATAATAGTGTTCATAGACTGCATTCATTTAATCCGAAGCCCT
TGAGTGCAGTGTGCTCTCTCCAAACAAAGCAGACACAATCATTAGGCATG
GCTCGCCCCGTACAGTTGGTCTCGTCCGTCATCTTGTTGCTTTGCTGCGC
TGCCGCAGCATCAGCATCAGCATCAAGCTTCGACGACTCCAATCCGATCA
GATTGGTATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTCCTCCAG
GTGATCGGCCAAGCCCGCCATGCTCTCTCCTTTGCCCGTTTTGCTCGCAG
GTATGGGAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGTTCGCGA
CTTTCTCCAAGAACTTGGATTTAATCAGATCTACCAATTGTAAAGGCCTA
TCTTACAGGCTCGGGTTGAACAAGTTTGCTGACTGGAGCTGGGAAGAGTT
CCAAAGGCACAGGTTGGGAGCTGCGCAAAACTGCTCTGCCACTACAAAAG
GAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACTGGAGG
GAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGATCTTG
CTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCACCAGGCCT
TTGGAAAGGGTATCTCTTT
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