DN618051

Overview
NameDN618051
Unique NameDN618051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.067e-27
Identity = 50/79 (63.29%), Postives = 62/79 (78.48%), Query Frame = -3
Query:  257 EVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 493
            EV + F  YKSGVYSS  C  TP  VNHAV+AVGYG ++G+ YW++KNSWG  WG++GYF +E GKNMCG+A CASYP+
Sbjct:  252 EVTEDFLMYKSGVYSSKSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERGKNMCGLAACASYPI 330          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.194e-20
Identity = 43/82 (52.44%), Postives = 57/82 (69.51%), Query Frame = -3
Query:  251 EVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 493
            +V   F  Y+SG+Y S  C  +P+ VNHAV+AVGYG + G  YW++KNSWG  WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct:  244 DVESDFMMYRSGIYQSQTC--SPLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWGERGYIRMARNRGNMCGIASLASLPMVA 323          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.848e-19
Identity = 42/76 (55.26%), Postives = 52/76 (68.42%), Query Frame = -3
Query:  254 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 478
            F+FY+SG+Y    C +   D++H V+ VGYG E G  YW++KNSWGE WGD GY  M    KN CGIAT ASYP+V
Sbjct:  145 FQFYQSGIYYEPDCSSE--DLDHGVLVVGYGFEGGKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAASYPLV 218          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.944e-19
Identity = 40/73 (54.79%), Postives = 47/73 (64.38%), Query Frame = -3
Query:  260 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 478
            F+ YKSG YS TKC N    +NH V AVGYGV DG   W+++NSWG  WGD GY  M +  N CG+AT   YP
Sbjct:  230 FQLYKSGAYSDTKCKNNFFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVATDPLYP 302          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: ACP2_ENTHI (Cysteine proteinase ACP2 (Fragment) OS=Entamoeba histolytica GN=ACP2 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.168e-18
Identity = 39/73 (53.42%), Postives = 48/73 (65.75%), Query Frame = -3
Query:  260 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 478
            F+ YKSG Y+ TKC N    +NH V AVGYGV DG   W+++NSWG +WGD GY  M +  N CG+AT   YP
Sbjct:  232 FQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTSWGDKGYINMVIEGNTCGVATDPLYP 304          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.526e-18
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = -3
Query:  254 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 478
            F+FY SGVY    C  +P  ++HAV+AVGYG E G  +WL+KNSW  +WGD GY KM   + N CGIAT ASYP+V
Sbjct:  250 FQFYSSGVYYEPSC--SPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVASYPLV 323          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.526e-18
Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = -3
Query:  260 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 478
            F+ YKSG Y+ TKC N    +NH V AVGYGV DG   W+++NSWG  WGD GY  M +  N CG+AT   YP
Sbjct:  237 FQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVATDPLYP 309          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 7.572e-18
Identity = 40/74 (54.05%), Postives = 52/74 (70.27%), Query Frame = -3
Query:  260 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 478
            F+FY+ GVY    C +   ++NHAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct:  256 FQFYRKGVYYDENCNSD--NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 327          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 9.889e-18
Identity = 40/74 (54.05%), Postives = 51/74 (68.92%), Query Frame = -3
Query:  260 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 478
            F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct:  257 FQFYSKGVYYDENCNSD--NLNHAVLAVGYGIQKGKKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 328          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.292e-17
Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = -3
Query:  260 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 478
            F+ YKSG Y+ T+C N    +NH V AVGYGV DG   W+++NSWG  WG+ GY  M +  N CG+AT   YP
Sbjct:  237 FQLYKSGAYTDTQCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGEKGYINMVIEGNTCGVATDPLYP 309          
The following BLAST results are available for this feature:
BLAST of DN618051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CATH_MOUSE3.067e-2763.29Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CATLL_FASHE6.194e-2052.44Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CATL1_CHICK6.848e-1955.26Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
CPP3_ENTHI8.944e-1954.79Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
ACP2_ENTHI1.168e-1853.42Cysteine proteinase ACP2 (Fragment) OS=Entamoeba h... [more]
CYSP2_HOMAM1.526e-1856.58Digestive cysteine proteinase 2 OS=Homarus america... [more]
CPP2_ENTHI1.526e-1853.42Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
CATK_BOVIN7.572e-1854.05Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
CATK_PIG9.889e-1854.05Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CPP1_ENTHI1.292e-1750.68Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02A18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618051 ID=DN618051; Name=DN618051; organism=Citrus sinensis; type=EST; length=495bp
ACAAAATATATATAACATCCGTTGGTGTCCTAGTCACAATGACTGTTTAC
ATGGACATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTG
CTATTGTAGATTATATGGACATTAATCTCCGAATTTATTTCGTACATAAA
GCCAACCATTCTGCTATCATTCTTGAGTGAAATAATATAAGTTTTATGAG
CAAATGACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTA
AGCCACAACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCC
CCATCTCCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAG
TTCTTAATCAGCCAATATGGAACACCATCTTCAACTCCGTACCCAACAGC
AACGACGGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGC
TGTAAACTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAA
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