DN618051

Overview
NameDN618051
Unique NameDN618051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.865e-16
Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = -3
Query:  257 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 478
            F+ Y+SG+++  KCG    +++HAVVAVGYG E+GV YW+++NSWG  WG+ GY +ME         CGIA  ASYPV
Sbjct:  242 FQHYQSGIFTG-KCGT---NMDHAVVAVGYGSENGVDYWIVRNSWGTRWGEDGYIRMERNVASKSGKCGIAIEASYPV 315          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.865e-16
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = -3
Query:  257 VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPV 487
            VD FR+Y SGVY++  C N   D++H V+A+GYG   G  Y+L+KNSW  NWG  GY  M     N+CG+++ A+YP+
Sbjct:  450 VDDFRYYMSGVYNNPACKNGLDDLDHEVLAIGYGTYQGQDYFLVKNSWSTNWGMDGYVYMARNDNNLCGVSSQATYPI 527          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.865e-16
Identity = 42/82 (51.22%), Postives = 49/82 (59.76%), Query Frame = -3
Query:  254 DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 484
            + F FYK G+Y    C +  MD  H V+ VGYG E    D   YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct:  254 ESFMFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAASYPTV 333          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.181e-16
Identity = 43/84 (51.19%), Postives = 51/84 (60.71%), Query Frame = -3
Query:  254 VVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 490
            +   FRFY+ GVY   KC +    VNHAV+ VGYG E    DG  YWLIKNSWG+ WG  GY K+   + N C IA+ A YP V
Sbjct:  263 ISSSFRFYQKGVYHEPKCSSY---VNHAVLVVGYGFEGNETDGNNYWLIKNSWGKRWGLRGYMKIAKDRNNHCAIASLAQYPTV 343          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.181e-16
Identity = 38/74 (51.35%), Postives = 48/74 (64.86%), Query Frame = -3
Query:  260 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYP 478
            F+FY  GVY  T C   P ++NHAV+AVGYG + G  +W+IKNSWG  WG+ GY  +    K  CGIA  AS+P
Sbjct:  261 FQFYSRGVYYDTGCN--PENINHAVLAVGYGAQKGTKHWIIKNSWGTEWGNKGYVLLARNMKQTCGIANLASFP 332          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 3.181e-16
Identity = 43/80 (53.75%), Postives = 51/80 (63.75%), Query Frame = -3
Query:  260 DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 484
            D FRFY  GVY    C +    VNHAV+ VGYG E    DG  YWLIKNSWGE WG +G+ K+   + N CGIA+ AS+P
Sbjct:  254 DSFRFYSGGVYHEPNCSSYV--VNHAVLVVGYGFEGNETDGNNYWLIKNSWGEEWGINGFMKIAKDRNNHCGIASQASFP 331          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 4.155e-16
Identity = 39/79 (49.37%), Postives = 54/79 (68.35%), Query Frame = -3
Query:  257 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-----KNMCGIATCASYPV 478
            F+ Y+SG+++ + CG    +++HAVVAVGYG E+GV YW+++NSWG  WG+ GY +ME          CGIA  ASYPV
Sbjct:  287 FQHYQSGIFTGS-CGT---NLDHAVVAVGYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAVEASYPV 361          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 4.155e-16
Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = -3
Query:  254 DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 484
            + F+FY  GVY+  +C    +D  H V+ VG+G  E G  YWL+KNSWG  WGD G+ KM   K N CGIA+ +SYP+V
Sbjct:  295 ESFQFYSEGVYNEPQCDAQNLD--HGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 371          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 4.155e-16
Identity = 42/82 (51.22%), Postives = 49/82 (59.76%), Query Frame = -3
Query:  254 DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 484
            + F FYK G+Y    C +  MD  H V+ VGYG E    D   YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct:  254 ESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 5.426e-16
Identity = 39/76 (51.32%), Postives = 50/76 (65.79%), Query Frame = -3
Query:  254 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 478
            F+ Y +GVY    C ++ +D  HAV+AVGYG E G  +WL+KNSW  +WG+ GY KM   + N CGIAT A YP V
Sbjct:  249 FQSYYTGVYYEPSCSSSQLD--HAVLAVGYGSEGGQDFWLVKNSWATSWGESGYIKMARNRNNNCGIATDACYPTV 322          
The following BLAST results are available for this feature:
BLAST of DN618051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CYSP4_BRANA1.865e-1651.28Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CFAD_DICDI1.865e-1647.44Counting factor associated protein D OS=Dictyostel... [more]
CATL1_CERAE1.865e-1651.22Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATQ_RAT3.181e-1651.19Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATK_CHICK3.181e-1651.35Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
CATJ_RAT3.181e-1653.75Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
GCP1_ARATH4.155e-1649.37Germination-specific cysteine protease 1 OS=Arabid... [more]
CATL_DROME4.155e-1649.37Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CATL1_HUMAN4.155e-1651.22Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CYSP1_HOMAM5.426e-1651.32Digestive cysteine proteinase 1 OS=Homarus america... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02A18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618051 ID=DN618051; Name=DN618051; organism=Citrus sinensis; type=EST; length=495bp
ACAAAATATATATAACATCCGTTGGTGTCCTAGTCACAATGACTGTTTAC
ATGGACATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTG
CTATTGTAGATTATATGGACATTAATCTCCGAATTTATTTCGTACATAAA
GCCAACCATTCTGCTATCATTCTTGAGTGAAATAATATAAGTTTTATGAG
CAAATGACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTA
AGCCACAACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCC
CCATCTCCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAG
TTCTTAATCAGCCAATATGGAACACCATCTTCAACTCCGTACCCAACAGC
AACGACGGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGC
TGTAAACTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAA
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