DN618051

Overview
NameDN618051
Unique NameDN618051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.087e-16
Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = -3
Query:  260 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 478
            F+FY  GVY    C     +VNHAV+ VGYG + G  YW+IKNSWGE+WG+ GY  +   K N CGI   AS+P
Sbjct:  256 FQFYSRGVYYDENCDRD--NVNHAVLVVGYGTQKGNKYWIIKNSWGESWGNKGYVLLARNKNNACGITNLASFP 327          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 9.256e-16
Identity = 40/80 (50.00%), Postives = 52/80 (65.00%), Query Frame = -3
Query:  254 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 478
            F+FY SG+Y   +C    + +NHAV+ VGYG E    DG  +WL+KNSWGE WG  GY K+     N CGIAT ++YP+V
Sbjct:  256 FQFYGSGIYYEPQCKR--VHLNHAVLVVGYGFEGEESDGNSFWLVKNSWGEEWGMKGYMKLAKDWSNHCGIATYSTYPIV 333          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 9.256e-16
Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = -3
Query:  236 GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPVVA*SAPE 481
            GF+FY  GV++  +CG    +++H V  VGYG   DG  YW++KNSWGE WG+ GY +M+ G    +  CGIA  ASYP+   + P+
Sbjct:  270 GFQFYSEGVFTG-RCGT---ELDHGVAIVGYGATRDGTKYWIVKNSWGEEWGESGYIRMQRGISDKRGKCGIAMEASYPIKTSANPK 352          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 9.256e-16
Identity = 41/80 (51.25%), Postives = 50/80 (62.50%), Query Frame = -3
Query:  254 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 478
            F+FYKSG+Y    C +  +D  H V+ VGYG E    +   YWL+KNSWG  WG +GY K+   K N CGIAT ASYP V
Sbjct:  257 FQFYKSGIYFEPDCSSKNLD--HGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 334          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.209e-15
Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = -3
Query:  239 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNM----CGIATCASYPVVA*SAP 478
            F+ Y SGV+S  +CG +   ++H VVAVGYG ++G  YW+++NSWG  WG+ GY +ME   N+    CGIA  ASYP  + + P
Sbjct:  284 FQLYHSGVFSG-RCGTS---LDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERNINVTTGKCGIAMMASYPTKSGANP 363          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.579e-15
Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = -3
Query:  254 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 478
            F+FYKSG+Y    C +   D++H V+ VGYG E     +W++KNSWG  WG+ GY KM   + N CGIAT ASYP V
Sbjct:  143 FQFYKSGIYYDPDCSSK--DLDHGVLVVGYGFEGTNNKFWIVKNSWGPEWGNKGYVKMAKDQNNHCGIATAASYPTV 217          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 2.693e-15
Identity = 37/74 (50.00%), Postives = 47/74 (63.51%), Query Frame = -3
Query:  260 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 478
            F+FY  GVY    C     +VNHAV+ VGYG + G  +W+IKNSWGE+WG+ GY  +   K N CGI   AS+P
Sbjct:  256 FQFYSRGVYYDENCDRD--NVNHAVLVVGYGTQKGSKHWIIKNSWGESWGNKGYALLARNKNNACGITNMASFP 327          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 3.517e-15
Identity = 38/76 (50.00%), Postives = 48/76 (63.16%), Query Frame = -3
Query:  254 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 478
            F  Y+SGVY    C     ++NH V+ VGYG  DG  YWL+KNSWG ++GD GY +M    KN CGIA+  SYP +
Sbjct:  258 FFLYQSGVYDDPSCTE---NMNHGVLVVGYGTLDGKDYWLVKNSWGLHFGDQGYIRMARNNKNHCGIASYCSYPEI 330          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 3.517e-15
Identity = 39/76 (51.32%), Postives = 48/76 (63.16%), Query Frame = -3
Query:  257 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV-PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPV 478
            FRFYK GVYS   CG      +HAV+AVGYG       YW++KNSWG +WG  GY  M   + NMC IA+ AS+P+
Sbjct:  324 FRFYKDGVYSEGNCGRP----DHAVLAVGYGTHPSYGDYWIVKNSWGTDWGKDGYVYMARNRGNMCHIASAASFPI 395          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.594e-15
Identity = 39/80 (48.75%), Postives = 51/80 (63.75%), Query Frame = -3
Query:  254 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 478
            F+FYKSG+Y    C +   D++H V+ VGYG E    +   +W++KNSWG  WG +GY KM   + N CGIAT ASYP V
Sbjct:  257 FQFYKSGIYYDPDCSSK--DLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334          
The following BLAST results are available for this feature:
BLAST of DN618051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CATK_RAT7.087e-1651.35Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
TEST2_RAT9.256e-1650.00Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CYSP_HEMSP9.256e-1644.83Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CATL2_HUMAN9.256e-1651.25Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
ORYB_ORYSJ1.209e-1546.43Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CATL1_SHEEP1.579e-1550.65Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
CATK_MOUSE2.693e-1550.00Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATS_RAT3.517e-1550.00Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CATL_BRUPA3.517e-1551.32Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CATL2_BOVIN4.594e-1548.75Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02A18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618051 ID=DN618051; Name=DN618051; organism=Citrus sinensis; type=EST; length=495bp
ACAAAATATATATAACATCCGTTGGTGTCCTAGTCACAATGACTGTTTAC
ATGGACATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTG
CTATTGTAGATTATATGGACATTAATCTCCGAATTTATTTCGTACATAAA
GCCAACCATTCTGCTATCATTCTTGAGTGAAATAATATAAGTTTTATGAG
CAAATGACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTA
AGCCACAACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCC
CCATCTCCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAG
TTCTTAATCAGCCAATATGGAACACCATCTTCAACTCCGTACCCAACAGC
AACGACGGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGC
TGTAAACTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAA
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