DN618051

Overview
NameDN618051
Unique NameDN618051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.594e-15
Identity = 39/79 (49.37%), Postives = 50/79 (63.29%), Query Frame = -3
Query:  254 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE---DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 478
            F+FYKSG+Y    C +   D++H V+ VGYG E       +W++KNSWG  WG +GY KM   + N CGIAT ASYP V
Sbjct:  257 FQFYKSGIYFDPDCSSK--DLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 333          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 4.594e-15
Identity = 39/80 (48.75%), Postives = 51/80 (63.75%), Query Frame = -3
Query:  254 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 478
            F+FYKSG+Y    C +   D++H V+ VGYG E    +   +W++KNSWG  WG +GY KM   + N CGIAT ASYP V
Sbjct:  257 FQFYKSGIYYDPDCSSK--DLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 5.999e-15
Identity = 38/76 (50.00%), Postives = 48/76 (63.16%), Query Frame = -3
Query:  254 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 478
            F  Y+SGVY    C     +VNH V+ VGYG  +G  YWL+KNSWG N+G+ GY +M   K N CGIA+  SYP +
Sbjct:  259 FFLYRSGVYYEPSC---TQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 331          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 7.835e-15
Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = -3
Query:  257 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 478
            F+FY  GV++    G+   D+NH V  VGYG   DG  YW+++NSWG  WG+HGY +M+      + +CGIA   SYP+
Sbjct:  270 FQFYSEGVFT----GDCSTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEHGYIRMQRNISKKEGLCGIAMLPSYPI 344          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.835e-15
Identity = 38/80 (47.50%), Postives = 51/80 (63.75%), Query Frame = -3
Query:  254 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 478
            F+FYKSG+Y    C +   D++H V+ VGYG E    +   +W++KNSWG  WG +GY KM   + N CGI+T ASYP V
Sbjct:  257 FQFYKSGIYYDPDCSSK--DLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGISTAASYPTV 334          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.835e-15
Identity = 36/79 (45.57%), Postives = 48/79 (60.76%), Query Frame = -3
Query:  257 DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM---GKNMCGIATCASYPV 484
            D F+ Y SG+++   CG     ++HAV  VGYG E G+ YW++KNSW   WG+ GY ++     G   CGIAT  SYPV
Sbjct:  268 DAFKHYSSGIFTGP-CGTA---IDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.023e-14
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = -3
Query:  254 GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 481
            G +FY+ G+    +   +P  ++HAV+ VGYG    +PYW IKNSWG +WG+ GY+ +  G   CG+ T AS  VV
Sbjct:  386 GMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVV 461          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 79.337 bits (194), Expect = 1.023e-14
Identity = 37/79 (46.84%), Postives = 48/79 (60.76%), Query Frame = -3
Query:  257 DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM---GKNMCGIATCASYPV 484
            D F+ Y SG+++   CG     V+HAV  VGYG E G+ YW++KNSW   WG+ GY ++     G   CGIAT  SYPV
Sbjct:  268 DAFKQYSSGIFTGP-CGTA---VDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.023e-14
Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = -3
Query:  260 FRFYKSG-VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCASYP 478
            F+ YK G +YS TKC +  M  NH V AVGYG      YW+I+NSWG +WGD GYF +     NMCGI   ++YP
Sbjct:  230 FQLYKKGTIYSDTKCRSRMM--NHCVTAVGYGSNSNGKYWIIRNSWGTSWGDAGYFLLARDSNNMCGIGRDSNYP 302          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.337e-14
Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = -3
Query:  236 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVVA*SAPE 478
            F FY  GV++  +CG    +++H V  VGYGV EDG  YW +KNSWG +WG+ GY ++E        +CGIA  ASYPV   S P+
Sbjct:  279 FMFYSEGVFTG-ECGT---ELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTYSKPK 360          
The following BLAST results are available for this feature:
BLAST of DN618051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CATL1_CANFA4.594e-1549.37Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATL1_BOVIN4.594e-1548.75Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CATS_HUMAN5.999e-1550.00Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
CYSEP_PHAVU7.835e-1544.30Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CATL1_PIG7.835e-1547.50Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
ACTN_ACTDE7.835e-1545.57Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
CATF_MOUSE1.023e-1443.42Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
ACTN_ACTCH1.023e-1446.84Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
ACP1_ENTHI1.023e-1450.67Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CYSP2_HORVU1.337e-1446.51Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02A18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618051 ID=DN618051; Name=DN618051; organism=Citrus sinensis; type=EST; length=495bp
ACAAAATATATATAACATCCGTTGGTGTCCTAGTCACAATGACTGTTTAC
ATGGACATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTG
CTATTGTAGATTATATGGACATTAATCTCCGAATTTATTTCGTACATAAA
GCCAACCATTCTGCTATCATTCTTGAGTGAAATAATATAAGTTTTATGAG
CAAATGACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTA
AGCCACAACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCC
CCATCTCCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAG
TTCTTAATCAGCCAATATGGAACACCATCTTCAACTCCGTACCCAACAGC
AACGACGGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGC
TGTAAACTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAA
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