DN618051

Overview
NameDN618051
Unique NameDN618051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.337e-14
Identity = 38/78 (48.72%), Postives = 51/78 (65.38%), Query Frame = -3
Query:  257 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 478
            F+ Y+SGV+  T CG    ++NH VV VGYG E+G  YW++KNS G+ WG+ GY KM       + +CGIA  ASYP+
Sbjct:  286 FQLYESGVFDGT-CGT---NLNHGVVVVGYGTENGRDYWIVKNSRGDTWGEAGYMKMARNIANPRGLCGIAMRASYPL 359          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.337e-14
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = -3
Query:  251 YKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIAT-CASYPVVA 469
            Y  GV SS  C N  +  NHAV+ VGYGVE+GVPYW+ KN+WG++WG++GYF++    N CG+    AS  V+A
Sbjct:  287 YYRGVISS--CENNGL--NHAVLLVGYGVENGVPYWVFKNTWGDDWGENGYFRVRQNVNACGMVNDLASTAVLA 356          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.746e-14
Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = -3
Query:  254 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 478
            F  Y+SGVY    C      VNH V+ +GYG  +G  YWL+KNSWG N+G+ GY +M   K N CGIA+  SYP +
Sbjct:  258 FFLYRSGVYYDPAC---TQKVNHGVLVIGYGDLNGKEYWLVKNSWGSNFGEQGYIRMARNKGNHCGIASYPSYPEI 330          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.746e-14
Identity = 38/76 (50.00%), Postives = 47/76 (61.84%), Query Frame = -3
Query:  254 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 478
            F  Y+SGVY    C     +VNH V+ VGYG  +G  YWL+KNSWG N+GD GY +M     N CGIA+  SYP +
Sbjct:  259 FFLYRSGVYYEPSC---TQNVNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPSYPEI 331          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 2.280e-14
Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = -3
Query:  257 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME----MGKNMCGIATCASYPV 478
            F+ Y SG+++  KCG     ++H V AVGYG E+G  YW+++NSWG++WG+ GY +ME         CGIA   SYP+
Sbjct:  271 FQLYSSGIFTG-KCGTA---LDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGKCGIAVEPSYPL 344          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 2.280e-14
Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = -3
Query:  257 DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPV 484
            + F+ Y +GVY    C +   D++H V+AVG G ++G  Y+++KNSWG +WG +GY  M   K N CGI+T ASYP+
Sbjct:  262 NSFQLYTAGVYYEPACSSE--DLDHGVLAVGMGTDNGEDYYIVKNSWGPSWGLNGYIHMARNKDNNCGISTMASYPI 336          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.280e-14
Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = -3
Query:  257 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 478
            F+FY  GV++    G+   D+NH V  VGYG   DG  YW+++NSWG  WG+ GY +M+      + +CGIA  ASYP+
Sbjct:  270 FQFYSEGVFT----GDCNTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQGYIRMQRNISKKEGLCGIAMMASYPI 344          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 2.280e-14
Identity = 38/76 (50.00%), Postives = 46/76 (60.53%), Query Frame = -3
Query:  254 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 478
            F  YK+GVY    C     +VNH V+ VGYG  DG  YWL+KNSWG ++GD GY +M     N CGIA   SYP +
Sbjct:  259 FFLYKTGVYYDPSC---TQNVNHGVLVVGYGNLDGKDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIANYPSYPEI 331          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 2.280e-14
Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = -3
Query:  254 RFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 475
            +FY SG+Y    C +   D++H V+ VGYG E    +   YWL+KNSWG+ WG  GY K+   + N CG+AT ASYP+V
Sbjct:  257 QFYSSGIYYEPNCSSK--DLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLATAASYPIV 333          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.977e-14
Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = -3
Query:  257 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 478
            F+FY  GV++ + CG    +++H V  VGYG   DG  YW +KNSWG  WG+ GY +ME G    + +CGIA  ASYP+
Sbjct:  268 FQFYSEGVFTGS-CGT---ELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPI 342          
The following BLAST results are available for this feature:
BLAST of DN618051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CPR4_ARATH1.337e-1448.72Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CATV_NPVLD1.337e-1451.35Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATS_SAIBB1.746e-1448.68Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CATS_CANFA1.746e-1450.00Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
ORYA_ORYSJ2.280e-1444.87Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CYSP3_DICDI2.280e-1445.45Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CYSEP_VIGMU2.280e-1444.30Vignain OS=Vigna mungo PE=1 SV=1[more]
CATS_BOVIN2.280e-1450.00Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATL1_RAT2.280e-1446.84Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CYSEP_RICCO2.977e-1446.84Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02A18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618051 ID=DN618051; Name=DN618051; organism=Citrus sinensis; type=EST; length=495bp
ACAAAATATATATAACATCCGTTGGTGTCCTAGTCACAATGACTGTTTAC
ATGGACATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTG
CTATTGTAGATTATATGGACATTAATCTCCGAATTTATTTCGTACATAAA
GCCAACCATTCTGCTATCATTCTTGAGTGAAATAATATAAGTTTTATGAG
CAAATGACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTA
AGCCACAACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCC
CCATCTCCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAG
TTCTTAATCAGCCAATATGGAACACCATCTTCAACTCCGTACCCAACAGC
AACGACGGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGC
TGTAAACTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAA
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