DN618051

Overview
NameDN618051
Unique NameDN618051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.977e-14
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = -3
Query:  254 GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 481
            G +FY+ G+    +   +P  ++HAV+ VGYG    VP+W IKNSWG +WG+ GY+ +  G   CG+ T AS  VV
Sbjct:  408 GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 483          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.889e-14
Identity = 38/82 (46.34%), Postives = 48/82 (58.54%), Query Frame = -3
Query:  254 DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 484
            + F+ YK G+Y    C +    V H V+ VGYG +    DG  YWLIKNSWG+ WG  GY K+   K N CGIA+ A YP +
Sbjct:  255 ESFKNYKGGIYHEPNCSSDT--VTHGVLVVGYGFKGIETDGNHYWLIKNSWGKRWGIRGYMKLAKDKNNHCGIASYAHYPTI 334          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 3.889e-14
Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = -3
Query:  254 RFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 475
            +FY SG+Y    C +  +D  H V+ VGYG E    +   YWL+KNSWG  WG  GY K+   + N CG+AT ASYPVV
Sbjct:  257 QFYSSGIYYEPNCSSKNLD--HGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.079e-14
Identity = 36/80 (45.00%), Postives = 47/80 (58.75%), Query Frame = -3
Query:  251 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME----MGKNMCGIATCASYPVVA 478
            F+ Y SG+++   CG      NH VV VGYG + G  YW+++NSWG+NWG+ GY  ME        +CGIA   SYP  A
Sbjct:  140 FQHYSSGIFTGP-CGTAQ---NHGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTKA 215          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATC_SCHMA (Cathepsin C OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.079e-14
Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = -3
Query:  281 EVVDGFRFYKSGVYSSTKCGN-----TPMDV-NHAVVAVGYGVE--DGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 493
            EV + F+FYK G+Y  T          P ++ NHAV+ VGYGV+   G PYW +KNSWG  WG+ GYF++  G + CG+
Sbjct:  365 EVYEDFQFYKEGIYHHTTVQTDHYNFNPFELTNHAVLLVGYGVDKLSGEPYWKVKNSWGVEWGEQGYFRILRGTDECGV 443          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.633e-14
Identity = 39/85 (45.88%), Postives = 51/85 (60.00%), Query Frame = -3
Query:  239 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVVA*SAP 478
            F FY  GV++   CG    +++H V  VGYGV EDG  YW +KNSWG +WG+ GY ++E        +CGIA  ASYPV   + P
Sbjct:  279 FMFYSEGVFTGD-CGT---ELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTYNKP 359          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.633e-14
Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = -3
Query:  260 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKN----MCGIATCASYP 478
            F+ YKSGV + T CG   + ++H VV VGYG   G  YW+I+NSWG NWGD GY K++   +     CGIA   SYP
Sbjct:  275 FQLYKSGVMTGT-CG---ISLDHGVVVVGYGSTSGEDYWIIRNSWGLNWGDSGYVKLQRNIDDPFGKCGIAMMPSYP 347          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.633e-14
Identity = 28/45 (62.22%), Postives = 38/45 (84.44%), Query Frame = -3
Query:  281 NHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 415
            NHAV+ VGYGVE+ VPYW++KN+WGE+WG+ GYF+++   N CGI
Sbjct:  269 NHAVLLVGYGVENNVPYWILKNTWGEDWGEQGYFRVQQNINACGI 313          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.633e-14
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = -3
Query:  281 YKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 469
            Y+ G+     C N  +  NHAV+ VGYGVE+ VPYW++KNSWG +WG+ G+FK++   N CGI
Sbjct:  254 YEQGIIKY--CANNGL--NHAVLLVGYGVENNVPYWILKNSWGTDWGEQGFFKIQQNVNACGI 312          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.633e-14
Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = -3
Query:  281 YKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 469
            YK+G+  +  C N    +NHAV+ VGYGV++ VPYW++KNSWG  WG+ GYF+++  KN CG+
Sbjct:  264 YKAGI--ADICENNE-GLNHAVLLVGYGVKNDVPYWILKNSWGAEWGEEGYFRVQRDKNSCGM 323          
The following BLAST results are available for this feature:
BLAST of DN618051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CATF_HUMAN2.977e-1443.42Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATR_MOUSE3.889e-1446.34Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATL1_MOUSE3.889e-1448.10Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
ERVB_TABDI5.079e-1445.00Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATC_SCHMA5.079e-1445.57Cathepsin C OS=Schistosoma mansoni PE=2 SV=1[more]
CYSP1_HORVU6.633e-1445.88Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
CPR1_ARATH6.633e-1449.35Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CATV_NPVHC6.633e-1462.22Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CATV_NPVEP6.633e-1450.79Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CATV_GVCP6.633e-1450.79Viral cathepsin OS=Cydia pomonella granulosis viru... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02A18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618051 ID=DN618051; Name=DN618051; organism=Citrus sinensis; type=EST; length=495bp
ACAAAATATATATAACATCCGTTGGTGTCCTAGTCACAATGACTGTTTAC
ATGGACATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTG
CTATTGTAGATTATATGGACATTAATCTCCGAATTTATTTCGTACATAAA
GCCAACCATTCTGCTATCATTCTTGAGTGAAATAATATAAGTTTTATGAG
CAAATGACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTA
AGCCACAACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCC
CCATCTCCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAG
TTCTTAATCAGCCAATATGGAACACCATCTTCAACTCCGTACCCAACAGC
AACGACGGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGC
TGTAAACTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAA
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