DN618051

Overview
NameDN618051
Unique NameDN618051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.663e-14
Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = -3
Query:  257 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 478
            F+ Y+SGV+  + CG    ++NH VV VGYG E+G  YWL+KNS G  WG+ GY KM       + +CGIA  ASYP+
Sbjct:  279 FQLYESGVFDGS-CGT---NLNHGVVVVGYGTENGRDYWLVKNSRGITWGEAGYMKMARNIANPRGLCGIAMRASYPL 352          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.663e-14
Identity = 33/78 (42.31%), Postives = 48/78 (61.54%), Query Frame = -3
Query:  257 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 478
            F+ Y+SG+++    G+  +  NHA+  VGYG E+   +W++KNSWG+NWG+ GY + E         CGI   ASYPV
Sbjct:  143 FQLYRSGIFT----GSCNISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPV 216          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.131e-13
Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = -3
Query:  257 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM----EMGKNMCGIATCASYPV 478
            F+ Y SG++  + CG     ++H VVAVGYG E+G  YW+++NSWG++WG+ GY +M          CGIA   SYP+
Sbjct:  279 FQLYDSGIFDGS-CGT---QLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASSSGKCGIAIEPSYPI 352          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.131e-13
Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = -3
Query:  281 YKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 469
            Y+SG+  +T C +  +  NHAV+ VGYG+E+  PYW+ KNSWG NWG++GYF+     N CG+
Sbjct:  268 YRSGI--ATVCNDNGL--NHAVLLVGYGIENDTPYWIFKNSWGSNWGENGYFRARRNINACGM 326          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATC_MOUSE (Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.131e-13
Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = -3
Query:  269 EVVDGFRFYKSGVYSSTKCGN--TPMDV-NHAVVAVGYGVED--GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 493
            EV D F  Y SG+Y  T   +   P ++ NHAV+ VGYG +   G+ YW+IKNSWG NWG+ GYF++  G + C I + A
Sbjct:  374 EVHDDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGRDPVTGIEYWIIKNSWGSNWGESGYFRIRRGTDECAIESIA 453          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13
Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = -3
Query:  257 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE--DGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 478
            F+ Y SGV++  +CG    +++H VVAVGYG +   G  YW ++NSWG +WG++GY +ME         CGIA  ASYP+
Sbjct:  299 FQLYDSGVFTG-RCGT---NLDHGVVAVGYGTDAATGAAYWTVRNSWGPDWGENGYIRMERNVTARTGKCGIAMMASYPI 374          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13
Identity = 32/84 (38.10%), Postives = 51/84 (60.71%), Query Frame = -3
Query:  251 DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED------GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 484
            +  +FY+ GV    K   +  +++H V+ VGYGV D       +PYW++KNSWG  WG+ GY+++  G N CG++  A+  V+A
Sbjct:  531 NAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVLA 614          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13
Identity = 26/46 (56.52%), Postives = 39/46 (84.78%), Query Frame = -3
Query:  281 VNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 418
            +NHAV+ VGYGVE+G+P+W++KN+WG +WG+ GYF+++   N CGI
Sbjct:  268 LNHAVLLVGYGVENGIPFWILKNTWGADWGEQGYFRVQQNINACGI 313          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13
Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = -3
Query:  269 EVVDGFRFYKSGVYSSTKCGN--TPMDV-NHAVVAVGYGVED--GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 493
            EV D F  YK G+Y  T   +   P ++ NHAV+ VGYG +   G+ YW++KNSWG  WG++GYF++  G + C I + A
Sbjct:  375 EVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIA 454          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.521e-13
Identity = 35/80 (43.75%), Postives = 51/80 (63.75%), Query Frame = -3
Query:  269 EVVDGFRFYKSGVYSSTKCGN--TPMDV-NHAVVAVGYGVE--DGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 493
            EV D F  Y+ GVY  T   +   P ++ NHAV+ VGYG +   G+ YW++KNSWG +WG++GYF++  G + C I + A
Sbjct:  375 EVYDDFLHYRKGVYHHTGLRDPFNPFELTNHAVLLVGYGTDAASGLDYWIVKNSWGTSWGENGYFRIRRGTDECAIESIA 454          
The following BLAST results are available for this feature:
BLAST of DN618051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CPR3_ARATH8.663e-1448.72Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CPGP2_ZINOF8.663e-1442.31Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
RD21A_ARATH1.131e-1343.59Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CATV_NPVST1.131e-1349.21Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATC_MOUSE1.131e-1346.25Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=... [more]
CYSP1_ORYSJ1.930e-1345.00Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CPR1_DROME1.930e-1338.10Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATV_NPVAP1.930e-1356.52Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CATC_HUMAN1.930e-1343.75Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]
CATC_BOVIN2.521e-1343.75Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02A18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618051 ID=DN618051; Name=DN618051; organism=Citrus sinensis; type=EST; length=495bp
ACAAAATATATATAACATCCGTTGGTGTCCTAGTCACAATGACTGTTTAC
ATGGACATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTG
CTATTGTAGATTATATGGACATTAATCTCCGAATTTATTTCGTACATAAA
GCCAACCATTCTGCTATCATTCTTGAGTGAAATAATATAAGTTTTATGAG
CAAATGACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTA
AGCCACAACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCC
CCATCTCCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAG
TTCTTAATCAGCCAATATGGAACACCATCTTCAACTCCGTACCCAACAGC
AACGACGGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGC
TGTAAACTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAA
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