DN618051

Overview
NameDN618051
Unique NameDN618051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.292e-13
Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = -3
Query:  281 YKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 469
            YK G+     C N  +  NHAV+ VGY VE+GVP+W++KN+WG +WG+ GYF+++   N CGI
Sbjct:  255 YKRGIMKY--CANHGL--NHAVLLVGYAVENGVPFWILKNTWGADWGEQGYFRVQQNINACGI 313          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.292e-13
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = -3
Query:  281 YKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 469
            YK GV     C N  +  NHAV+ VGY VE+GVP+W++KN+WG +WG+ GYF+++   N CGI
Sbjct:  255 YKRGVIRY--CANHGL--NHAVLLVGYAVENGVPFWILKNTWGTDWGEQGYFRVQQNINACGI 313          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 3.292e-13
Identity = 40/81 (49.38%), Postives = 50/81 (61.73%), Query Frame = -3
Query:  254 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSW-GENWGDHGYFKMEMGK-NMCGIATCASYPVV 478
            F+FYK G+Y   +C   P  ++HA++ VGY  E    D   YWL+KNS  G+NWG  GY KM   + N CGIAT ASYP V
Sbjct:  199 FQFYKKGIYFEPRCD--PEGLDHAMLLVGYSYEGADSDNNKYWLVKNSSEGKNWGMDGYIKMAKDRRNNCGIATAASYPTV 277          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATC_PONAB (Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.292e-13
Identity = 35/80 (43.75%), Postives = 49/80 (61.25%), Query Frame = -3
Query:  269 EVVDGFRFYKSGVYSSTKCGN--TPMDV-NHAVVAVGYGVED--GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 493
            EV D F  YK G+Y  T   +   P ++ NHAV+ VGYG +   G+ YW++KNSWG  WG+ GYF++  G + C I + A
Sbjct:  375 EVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGEDGYFRIRRGTDECAIESIA 454          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATB_RAT (Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.292e-13
Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = -3
Query:  281 VVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 490
            V   F  YKSGVY   + G+      HA+  +G+G+E+GVPYWL+ NSW  +WGD+G+FK+  G+N CGI
Sbjct:  255 VFSDFLTYKSGVYKH-EAGDVMG--GHAIRILGWGIENGVPYWLVANSWNVDWGDNGFFKILRGENHCGI 321          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATB_MOUSE (Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.292e-13
Identity = 36/70 (51.43%), Postives = 47/70 (67.14%), Query Frame = -3
Query:  281 VVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 490
            V   F  YKSGVY   + G+  M   HA+  +G+GVE+GVPYWL  NSW  +WGD+G+FK+  G+N CGI
Sbjct:  255 VFSDFLTYKSGVYKH-EAGD--MMGGHAIRILGWGVENGVPYWLAANSWNLDWGDNGFFKILRGENHCGI 321          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.299e-13
Identity = 33/77 (42.86%), Postives = 44/77 (57.14%), Query Frame = -3
Query:  260 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYP 478
            F  Y  G+Y    C  +P  +NH V+ VGYG  DGV YW+ KNSWG +WG+ GY  ++        +CG+   ASYP
Sbjct:  280 FHLYTGGIYDGENC-TSPYGINHFVLLVGYGSADGVDYWIAKNSWGFDWGEDGYIWIQRNTGNLLGVCGMNYFASYP 355          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATB_PONAB (Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.299e-13
Identity = 33/70 (47.14%), Postives = 44/70 (62.86%), Query Frame = -3
Query:  281 VVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 490
            V   F  YKSGVY         M   HA+  +G+GVE+G PYWL+ NSW  +WGD+G+FK+  G++ CGI
Sbjct:  255 VYSDFLLYKSGVYQHV---TGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGI 321          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATB_MACFA (Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.299e-13
Identity = 33/70 (47.14%), Postives = 44/70 (62.86%), Query Frame = -3
Query:  281 VVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 490
            V   F  YKSGVY         M   HA+  +G+GVE+G PYWL+ NSW  +WGD+G+FK+  G++ CGI
Sbjct:  255 VYSDFLLYKSGVYQHV---TGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGI 321          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATB_HUMAN (Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 4.299e-13
Identity = 33/70 (47.14%), Postives = 44/70 (62.86%), Query Frame = -3
Query:  281 VVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 490
            V   F  YKSGVY         M   HA+  +G+GVE+G PYWL+ NSW  +WGD+G+FK+  G++ CGI
Sbjct:  255 VYSDFLLYKSGVYQHV---TGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGI 321          
The following BLAST results are available for this feature:
BLAST of DN618051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CATV_NPVCF3.292e-1349.21Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATV_NPVCD3.292e-1350.79Viral cathepsin OS=Choristoneura fumiferana defect... [more]
CATL6_HUMAN3.292e-1349.38Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATC_PONAB3.292e-1343.75Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=... [more]
CATB_RAT3.292e-1348.57Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2[more]
CATB_MOUSE3.292e-1351.43Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2[more]
P34_SOYBN4.299e-1342.86P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CATB_PONAB4.299e-1347.14Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1[more]
CATB_MACFA4.299e-1347.14Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV... [more]
CATB_HUMAN4.299e-1347.14Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02A18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618051 ID=DN618051; Name=DN618051; organism=Citrus sinensis; type=EST; length=495bp
ACAAAATATATATAACATCCGTTGGTGTCCTAGTCACAATGACTGTTTAC
ATGGACATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTG
CTATTGTAGATTATATGGACATTAATCTCCGAATTTATTTCGTACATAAA
GCCAACCATTCTGCTATCATTCTTGAGTGAAATAATATAAGTTTTATGAG
CAAATGACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTA
AGCCACAACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCC
CCATCTCCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAG
TTCTTAATCAGCCAATATGGAACACCATCTTCAACTCCGTACCCAACAGC
AACGACGGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGC
TGTAAACTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAA
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