DN618045

Overview
NameDN618045
Unique NameDN618045
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN618045 vs. ExPASy Swiss-Prot
Match: UGDH_MOUSE (UDP-glucose 6-dehydrogenase OS=Mus musculus GN=Ugdh PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.303e-17
Identity = 52/123 (42.28%), Postives = 72/123 (58.54%), Query Frame = -1 
Query:  270 IDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTTVKQVSVVWDAYEATKDAHGVCILTEWDEFKTLDYQRIYDNMQKPAFVFDGRNVVDA--NKLREIGFIVYSIGK 632
            I + K L+ + A L IYDP+V  +QI  DL+      D  +          + V++  D YEA   AH + I TEWD FK LDY+RI+  M KPAF+FDGR V+D   ++L+ IGF + +IGK
Sbjct:  351 IYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSADDQVS---------RLVTISKDPYEACDGAHALVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHSELQTIGFQIETIGK 464
The following BLAST results are available for this feature:
BLAST of DN618045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
UGDH_MOUSE1.303e-1742.28UDP-glucose 6-dehydrogenase OS=Mus musculus GN=Ugd... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02A15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618045 ID=DN618045; Name=DN618045; organism=Citrus sinensis; type=EST; length=632bp
TCGTAACAGGATTAAATCAAATAAAAATCAATATGAGTCTTCTAACAAAC
AAGTAACAGACAGACAGTAGTATCATCAAATAAAGTGATAAGGCAAAAAC
ATAGAGCCTCTTAGCAAAAGCAAAGGCACAACAAAAACTCATCAAAATAT
AGTAAAGAATTGAGCTGACTTCTTCATCATCTATAATCTGATGCCCGATG
ACACGAGCATGCCCATTGGCGTCTCTTTTATGCAACAGCCGGCATGTCCT
TCAACCATGGATCGAGTGGCTTACCAATGGAGTACACGATGAAACCAATC
TCCCTCAACTTGTTGGCATCAACAACATTCCTGCCATCAAACACGAATGC
TGGTTTCTGCATGTTGTCATATATCCTCTGATAGTCAAGAGTCTTGAACT
CATCCCACTCGGTCAAGATGCAGACACCATGGGCATCTTTTGTTGCTTCA
TAGGCATCCCAGACCACGCTCACTTGCTTCACCGTGGTGGGACTCATTGG
CTGGAGGTGAAGAGGATGGTCCCAGTCAAACTTGTTCATTGTAAGGTCCC
TCTGGATCTGGTCCTCGGTGACCTGTGGGTCGTATATACTCAACCGAGCT
TTGTCTCCCAAAAGCCCCTTGCAGACATCAAT
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