DN617980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_CYAME (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon merolae GN=pdhB PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.423e-44 Identity = 91/151 (60.26%), Postives = 114/151 (75.50%), Query Frame = -2 Query: 134 EHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 586 EHVLLYNLK+ IP +EY+ L++A++VR G VTI+TYSRM +HVMQA K LV +G +PEVID+ SLKP DL T+ S+ KTH+ +IVEECM+TGGI A + A I + D LDAPI LSS+DVPTPY G LE+ +VQP QIV AV+ L Sbjct: 173 EHVLLYNLKQEIPKQEYVLPLDKAQVVREGSDVTIITYSRMLHHVMQAVKQLVAQGMNPEVIDLISLKPIDLETLVTSVSKTHKAIIVEECMQTGGIAAEVMAQIYSHAFDELDAPIRRLSSKDVPTPYNGYLEQACLVQPTQIVEAVKTL 323
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.338e-26 Identity = 65/157 (41.40%), Postives = 100/157 (63.69%), Query Frame = -2 Query: 128 EHVLLYNLK----ERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ 586 E LLYN K ++ D+EY+ + +A++ R G+ VTI+ +SR+ + M+AA+ L +G EVI++R+++P D TI NS+KKT++++ VEE GIGA ++A + E+ DYLDAPI + DVP PYA LE +VQ IV A +++ Q Sbjct: 197 ESELLYNYKFDLSDQEQDKEYLVPIGKAKVEREGKDVTIVGFSRIVSNCMEAAEILAKEGISAEVINLRTIRPIDAETIVNSLKKTNKLVTVEEGWAQSGIGAEISALMMEHAFDYLDAPIERICGADVPMPYASNLENAAMVQTQNIVNAAKRVTQ 353
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.808e-23 Identity = 58/152 (38.16%), Postives = 92/152 (60.53%), Query Frame = -2 Query: 131 EHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 586 E+ +LY +P+ +A+++R G VTI+T+S + AA L N D EVID+R++KP D TI S+KKT+R++IVEE G+GAS+ + + + DYLDAPI +S +DVP P+A LE+ + + ++ AV+++C Sbjct: 171 ENEILYGHSFDVPETIEPIPFGQAKILREGSSVTIVTFSIQVKLALDAANVLQNDNIDCEVIDLRTIKPLDTDTIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPFAVNLEKLALPSESDVIEAVKKVC 322
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.999e-22 Identity = 56/152 (36.84%), Postives = 90/152 (59.21%), Query Frame = -2 Query: 131 EHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 586 E+ +LY +P +A+++R G VTI+T+S + AA + N D EVID+R++KP D TI S+KKT+R+++VEE G+GAS+ + + + DYLDAPI +S +D+P PYA LE + + ++ AV+++C Sbjct: 171 ENEILYGHSFDVPKTIEPIPFGQAKILREGSSVTIVTFSIQVKLALDAANFVQNDNIDCEVIDLRTIKPLDTETIIESVKKTNRLVVVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDLPLPYAVNLETLALPSESDVIEAVKKVC 322
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_RICPR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia prowazekii GN=pdhB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.596e-22 Identity = 55/152 (36.18%), Postives = 90/152 (59.21%), Query Frame = -2 Query: 131 EHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 586 E+ +LY +PD +A++++ G +VTI+T+S + L N D E+ID+R++KP D +I S+KKT+R++IVEE G+GAS+ + + + DYLDAPI +S +DVP PYA LE+ + ++ AV+++C Sbjct: 171 ENEILYGHSFDVPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCELIDLRTIKPLDTDSIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPYAVNLEKLAMPSANDLIEAVKKVC 322
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 7.596e-22 Identity = 57/156 (36.54%), Postives = 90/156 (57.69%), Query Frame = -2 Query: 131 EHVLLYN----LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 586 E+ LLY + E D + + +A++ R G+ VTI+T+S+M ++AA+ L +G EVI++RS++P D TI S++KT R++ VEE G+ A + A++ E YLDAP+ ++ DVP PYA LE + Q IV A ++ C Sbjct: 204 ENELLYGESFPISEEALDSSFCLPIGKAKIEREGKDVTIVTFSKMVGFALKAAEKLAEEGISAEVINLRSIRPLDRATINASVRKTSRLVTVEEGFPQHGVCAEICASVVEESFSYLDAPVERIAGADVPMPYAANLERLALPQIEDIVRASKRAC 359
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.921e-22 Identity = 55/152 (36.18%), Postives = 89/152 (58.55%), Query Frame = -2 Query: 131 EHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 586 E+ +LY +PD +A++++ G +VTI+T+S + L N D E+ID+R++KP D I S+KKT+R++IVEE G+GAS+ + + + DYLDAPI +S +DVP PYA LE+ + ++ AV+++C Sbjct: 171 ENEILYGHSFDVPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCELIDLRTIKPLDTNMIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPYAVNLEKLAMPSANDLIEAVKKVC 322
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_RHIME (Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium meliloti GN=pdhB PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.296e-21 Identity = 50/153 (32.68%), Postives = 92/153 (60.13%), Query Frame = -2 Query: 131 EHVLLYNLKERIPD-EEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 586 E+ +LY +P ++++ + +A + R G+ T++++ + ++AA L +G D E+ID+R+++P DL T+ S+KKT R++ VEE +G + + + DYLDAPI+ ++ +DVP PYA LE+ + A++V AV+ +C Sbjct: 306 ENEILYGQSFEVPKLDDFVLPIGKARIHRTGKDATLVSFGIGMTYAIKAAAELEAQGIDVEIIDLRTIRPMDLPTVIESVKKTGRLVTVEEGYPQSSVGTEIATRVMQQAFDYLDAPILTIAGKDVPMPYAANLEKLALPNVAEVVDAVKAVC 458
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_ZYMMO (Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis GN=pdhB PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.210e-21 Identity = 55/150 (36.67%), Postives = 90/150 (60.00%), Query Frame = -2 Query: 131 LLYNLKERIPD-EEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 577 LLY +P ++++ + +A ++R G+ VTI++YS + AA+ L +G D EVID+R+L+P D TI S+ KT+R++ VE+ I + + A E D LDAP++ +++ D PTPYA LE+ +V P I+ AV ++C Sbjct: 310 LLYGKTFDVPKMDDFVLPIGKARIIREGKDVTIVSYSIGVSFALTAAEALAKEGIDAEVIDLRTLRPLDKETILQSLAKTNRIVTVEDGWPVCSISSEIAAIAMEEGFDNLDAPVLRVTNADTPTPYAENLEKKGLVNPEAIIEAVRKVC 459
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_RICBR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia bellii (strain RML369-C) GN=pdhB PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.210e-21 Identity = 54/152 (35.53%), Postives = 91/152 (59.87%), Query Frame = -2 Query: 131 EHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 586 E+ +LY I + +A++++ G+ VTI+T+S + AA L + + EVID+R++KP D+ TI S+KKT R++++EE GIGA++ A + + DYLDAP+ +S +DVP PYA LE+ + ++ AV+++C Sbjct: 171 ENEILYGHSFDISENVEPIPFGKAKVLKEGDSVTIVTFSIQVKLALDAANILQSDNINCEVIDLRTIKPLDIDTIIESVKKTGRLVVIEEGWFFAGIGATIAAIVMKEAFDYLDAPVEIVSGKDVPLPYAVNLEKLALPSEYDVINAVKKVC 322 The following BLAST results are available for this feature:
BLAST of DN617980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617980 ID=DN617980; Name=DN617980; organism=Citrus sinensis; type=EST; length=590bpback to top |