DN617980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.871e-20 Identity = 55/156 (35.26%), Postives = 87/156 (55.77%), Query Frame = -2 Query: 131 EHVLLYN----LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 586 E+ LLY + + D + + +A++ R G+ VTI +S+M ++AA+ L +G EVI++RS++P D TI S++KT+R++ VEE G+GA + ++ E YLDA + + DVP PYAG LE V IV A ++ C Sbjct: 194 ENELLYGESFPVSAEVLDSSFWLPIGKAKIEREGKDVTITAFSKMVGFALKAAEILEKEGISAEVINLRSIRPLDRPTINASVRKTNRLVTVEEGFPQHGVGAEICTSVIEESFGYLDATVERIGGADVPMPYAGNLERLVVPHVEDIVRAAKRAC 349
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_CAEEL (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 5.444e-20 Identity = 57/155 (36.77%), Postives = 91/155 (58.71%), Query Frame = -2 Query: 137 EHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITE-NFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQ 586 E+ +LY + DE +++ + +A++ R G+HVTI++YSR ++AAK L G EVI++RSL+PFD +I S+ KTH ++ VE GIG+ + A + E + D LDAP++ ++ DVP PY TLE + +V AV++ Sbjct: 193 ENEILYGQSFPVGDEVLSDDFVVPIGKAKIERAGDHVTIVSYSRGVEFSLEAAKQLEAIGVSAEVINLRSLRPFDFESIRQSVHKTHHLVSVETGWPFAGIGSEIAAQVMESDVFDQLDAPLLRVTGVDVPMPYTQTLEAAALPTAEHVVKAVKK 347
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 5.444e-20 Identity = 55/155 (35.48%), Postives = 94/155 (60.65%), Query Frame = -2 Query: 137 EHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITEN-FHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQ 586 E+ L+Y + +P E +++ + +A++ R G HVTI+ +SR H ++AA L +G + EVI++R+++P D+ TI S+ KT+ ++ VE G+GA + A I E ++LDAP V ++ DVP PYA LE+ +V Q I+ A+++ Sbjct: 201 ENELMYGVPFELPSEAQSKDFLIPIGKAKIERQGTHVTIVAHSRPVGHCLEAATVLSKEGIECEVINLRTIRPMDIETIEGSVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSVPQVKDIIFAIKK 355
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_STAAW (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MW2) GN=pdhB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.110e-20 Identity = 49/137 (35.77%), Postives = 84/137 (61.31%), Query Frame = -2 Query: 179 EHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 586 EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M M+AA+ L GY EVID+R+++P D+ TI S++KT R ++V+E R G+GA++ A ++E L+API +++ D P+ W Sbjct: 172 EHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVW 308
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_STAAU (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus GN=pdhB PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.110e-20 Identity = 49/137 (35.77%), Postives = 84/137 (61.31%), Query Frame = -2 Query: 179 EHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 586 EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M M+AA+ L GY EVID+R+++P D+ TI S++KT R ++V+E R G+GA++ A ++E L+API +++ D P+ W Sbjct: 172 EHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVW 308
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_STAAS (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MSSA476) GN=pdhB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.110e-20 Identity = 49/137 (35.77%), Postives = 84/137 (61.31%), Query Frame = -2 Query: 179 EHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 586 EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M M+AA+ L GY EVID+R+++P D+ TI S++KT R ++V+E R G+GA++ A ++E L+API +++ D P+ W Sbjct: 172 EHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVW 308
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_STAAR (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MRSA252) GN=pdhB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.110e-20 Identity = 49/137 (35.77%), Postives = 84/137 (61.31%), Query Frame = -2 Query: 179 EHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 586 EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M M+AA+ L GY EVID+R+++P D+ TI S++KT R ++V+E R G+GA++ A ++E L+API +++ D P+ W Sbjct: 172 EHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVW 308
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_STAAN (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain N315) GN=pdhB PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.110e-20 Identity = 49/137 (35.77%), Postives = 84/137 (61.31%), Query Frame = -2 Query: 179 EHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 586 EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M M+AA+ L GY EVID+R+++P D+ TI S++KT R ++V+E R G+GA++ A ++E L+API +++ D P+ W Sbjct: 172 EHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVW 308
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_STAAM (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhB PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.110e-20 Identity = 49/137 (35.77%), Postives = 84/137 (61.31%), Query Frame = -2 Query: 179 EHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 586 EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M M+AA+ L GY EVID+R+++P D+ TI S++KT R ++V+E R G+GA++ A ++E L+API +++ D P+ W Sbjct: 172 EHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVW 308
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_STAAC (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain COL) GN=pdhB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.110e-20 Identity = 49/137 (35.77%), Postives = 84/137 (61.31%), Query Frame = -2 Query: 179 EHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 586 EH+ LY + +E +P+EEY ++ +A + + G ++I+TY M M+AA+ L GY EVID+R+++P D+ TI S++KT R ++V+E R G+GA++ A ++E L+API +++ D P+ W Sbjct: 172 EHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTVQPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIYPFTQAENVW 308 The following BLAST results are available for this feature:
BLAST of DN617980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617980 ID=DN617980; Name=DN617980; organism=Citrus sinensis; type=EST; length=590bpback to top |