DN617980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.027e-18 Identity = 51/155 (32.90%), Postives = 93/155 (60.00%), Query Frame = -2 Query: 137 EHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITEN-FHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQ 586 E+ L+Y + +P E +++ + +A++ R G H+T++ +SR H ++AA L +G + EVI++R+++P D+ I S+ KT+ ++ VE G+GA + A I E ++LDAP V ++ DVP PYA LE+ ++ Q I+ A+++ Sbjct: 201 ENELMYGVAFELPTEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCLEAAAVLSKEGIECEVINLRTIRPMDIEAIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKK 355
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_BACSU (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus subtilis GN=pdhB PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 3.901e-18 Identity = 45/137 (32.85%), Postives = 82/137 (59.85%), Query Frame = -2 Query: 179 EHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEW 586 EH+ LY + ++ +P+EEY L +A++ R G ++I+TY M + ++AA L G EV+D+R++ P D+ TI S++KT R ++V+E + GI A++ A I + L+AP++ +++ D P++ W Sbjct: 172 EHMKLYRSFRQEVPEEEYTIELGKADVKREGTDLSIITYGAMVHESLKAADELEKDGISAEVVDLRTVSPLDIDTIIASVEKTGRAIVVQEAQKQAGIAANVVAEINDRAILSLEAPVLRVAAPDTVFPFSQAESVW 308
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_ASCSU (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Ascaris suum PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.095e-18 Identity = 53/155 (34.19%), Postives = 89/155 (57.42%), Query Frame = -2 Query: 137 EHVLLYNLKERIPDE----EYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITE-NFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQ 586 E+ +LY +K + E +++ +A++ RPG+ +TI++ S + AA L G D EVI++R ++P D T+ +S+ KT ++ VE G+GA ++A +TE + YLD PI+ ++ DVP PYA LE + QPA +V V++ Sbjct: 202 ENEILYGMKFPVSPEAQSPDFVLPFGQAKIQRPGKDITIVSLSIGVDVSLHAADELAKSGIDCEVINLRCVRPLDFQTVKDSVIKTKHLVTVESGWPNCGVGAEISARVTESDAFGYLDGPILRVTGVDVPMPYAQPLETAALPQPADVVKMVKK 356
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ACOB_BACSU (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Bacillus subtilis GN=acoB PE=3 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 6.655e-18 Identity = 48/152 (31.58%), Postives = 82/152 (53.95%), Query Frame = -2 Query: 134 FEHVLLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 589 FE YN+K +P++ Y L +A++ R G VT+ + ++AA L +G + EV+D RSL P D I S++KT+R++I++E I + A + + D LDAPI +++ P P++ LE+ + P +IV+ +L Sbjct: 184 FEDKTSYNMKGEVPEDYYTIPLGKADIKREGNDVTLFAVGKQVNTALEAAAQLSERGIEAEVLDPRSLSPLDEDAIFTSLEKTNRLIIIDEANPRCSIATDIAALVADKGFDLLDAPIKRITAPHTPVPFSPVLEDQYLPTPDKIVSVTLEL 335
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.135e-17 Identity = 56/156 (35.90%), Postives = 89/156 (57.05%), Query Frame = -2 Query: 134 EHVLLYNLKERIPDEEYICNLE---EAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNK-GYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITEN-FHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQL 586 E+ LLY I +E +A++ R G ++I+TY+R ++AA+ L K G EVI++RS++P D I ++KKT+ ++ VE + G+GA + A + E+ DYLDAPI ++ DVPTPYA LE++ IV AV+++ Sbjct: 207 ENELLYGESFEISEEALSPEFTLPYKAKIEREGTDISIVTYTRNVQFSLEAAEILQKKYGVSAEVINLRSIRPLDTEAIIKTVKKTNHLITVESTFPSFGVGAEIVAQVMESEAFDYLDAPIQRVTGADVPTPYAKELEDFAFPDTPTIVKAVKEV 362
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_SCHPO (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=pdb1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.634e-17 Identity = 54/158 (34.18%), Postives = 91/158 (57.59%), Query Frame = -2 Query: 131 EHVLLYN----LKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTL-VNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITE-NFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 586 E+ +LY + + E+++ A++ RPG+ +TI+ S ++AA L + G + EVI++RS++P D+ TI S+KKT+R++ V++ GIG+ + A I E + DYLDAP+ +S DVP PY+ +E +V A +V A + C Sbjct: 206 ENEILYGKTFPISKEALSEDFVLPFGLAKVERPGKDITIVGESISVVTALEAADKLKADYGVEAEVINLRSIRPLDINTIAASVKKTNRIVTVDQAYSQHGIGSEIAAQIMESDAFDYLDAPVERVSMADVPMPYSHPVEAASVPN-ADVVVAAAKKC 362
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODBB_THET2 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1756 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.634e-17 Identity = 44/127 (34.65%), Postives = 74/127 (58.27%), Query Frame = -2 Query: 197 LLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYA 577 L ++KE +P+E+Y ++ +A + R G+ +T++ Y + V+QAA L G EV+D+R+L P+D + NS+ KT RV++V + R + + A I E+ D L AP + ++ D P PYA Sbjct: 176 LYRSVKEEVPEEDYTLSIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEVLDLRTLMPWDYEAVMNSVAKTGRVVLVSDAPRHASFVSEVAATIAEDLLDMLLAPPIRVTGFDTPYPYA 302
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODBB_THET8 (2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.255e-16 Identity = 44/127 (34.65%), Postives = 73/127 (57.48%), Query Frame = -2 Query: 197 LLYNLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYA 577 L ++KE +P+E+Y + +A + R G+ +T++ Y + V+QAA L G EV+D+R+L P+D + NS+ KT RV++V + R + + A I E+ D L AP + ++ D P PYA Sbjct: 176 LYRSVKEEVPEEDYTLPIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEVLDLRTLMPWDYEAVMNSVAKTGRVVLVSDAPRHASFVSEVAATIAEDLLDMLLAPPIRVTGFDTPYPYA 302
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODBB_DICDI (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Dictyostelium discoideum GN=bkdB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.418e-14 Identity = 46/131 (35.11%), Postives = 75/131 (57.25%), Query Frame = -2 Query: 203 FEHVLLY-NLKERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNK-GYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTP 589 FE L+Y + E +P +Y L +A +V+ G+ +TI+ + ++QA K G E+ID+R+++P+D+ T+ S+KKT RV+I E +TGG A ++A I E +L+API + D P P Sbjct: 216 FEPKLMYRSAVEEVPIGDYEIPLGKARIVKEGKDITIIGWGAQMRVLLQAVNMAEEKLGISCELIDLRTIQPWDVETVVESVKKTGRVVISHEAPKTGGWAAEISATIQERCFLHLEAPIQRVCGYDTPFP 346
BLAST of DN617980 vs. ExPASy Swiss-Prot
Match: ODPB_ACHLA (Pyruvate dehydrogenase E1 component subunit beta OS=Acholeplasma laidlawii GN=pdhB PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.935e-13 Identity = 42/145 (28.97%), Postives = 78/145 (53.79%), Query Frame = -2 Query: 128 KERIPDEEYICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLYTIGNSIKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTVVQPAQIVTAVEQLCQ 562 K+ +P E Y + +A++V+ G +T++ + + V +A K + +G E+ID+R++ P D TI NS+KKT + ++V E +++ G A L + E +L+A V + D+ P A E + QP +I + +L + Sbjct: 181 KQEVPAEMYEIPIGKAKVVKQGTDMTVVAWGSIVREVEKAVKLVEAEGISVEIIDLRTISPIDEETILNSVKKTGKFMVVTEAVKSYGPAAELITMVNEKAFFHLEAAPVRFTGFDITVPLARG-EHYHFPQPEKIAAYIRKLAK 324 The following BLAST results are available for this feature:
BLAST of DN617980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617980 ID=DN617980; Name=DN617980; organism=Citrus sinensis; type=EST; length=590bpback to top |