DN617925
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617925 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.313e-36 Identity = 65/124 (52.42%), Postives = 91/124 (73.39%), Query Frame = -3 Query: 270 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 641 GGWCN HFDM++PA+ I Y AGIVPI ++++ C + GG+RFT+ G +YF LVL+TN+ G+G + S+S+KGS TGW MSRNWG NWQ + L GQ+LSF +T++ G+T+ ++VVP W Sbjct: 112 GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGW 235
BLAST of DN617925 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 3.021e-36 Identity = 71/126 (56.35%), Postives = 91/126 (72.22%), Query Frame = -3 Query: 270 DNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 647 D GG CNPP +HF + AF +IA ++AG +P+ +RRI C K+G +RFTV+G F VLITNV G+GD+ +V IKGS+TGW M RNWGQNW N+ L Q+LSF++T+SD TVTS NV P NW Sbjct: 127 DGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNW 252
BLAST of DN617925 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.153e-36 Identity = 63/124 (50.81%), Postives = 91/124 (73.39%), Query Frame = -3 Query: 270 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 641 GGWCN HFDM++PA+ I Y AGI+PI ++++ C + GG+RFT+NG +YF LVL+TN+ G+G + S+S+KGS TGW M+RNWG NWQ + L GQ+LSF +T++ G+T+ ++ VP W Sbjct: 112 GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGW 235
BLAST of DN617925 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.658e-34 Identity = 62/124 (50.00%), Postives = 90/124 (72.58%), Query Frame = -3 Query: 270 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 641 GGWCN +FDM++PA+ I Y AGIVPI ++++ C + GG+RF +NG +YF LVL+TN+ G+G + S+S+KGS TGW M+RNWG NWQ + L GQ+LSF +T++ G+T+ ++ VP W Sbjct: 103 GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGW 226
BLAST of DN617925 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.074e-33 Identity = 64/129 (49.61%), Postives = 91/129 (70.54%), Query Frame = -3 Query: 270 LSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 656 LS+D GGWCN P +H +++ AF IA+ RA ++PI +RR+ C ++GG+RF+++G S+F VLI+NVG G+V V +KG T W M+RNWGQNW S+ L GQSLSF++T G+T+ S +V P W Sbjct: 115 LSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYW 243
BLAST of DN617925 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 4.083e-33 Identity = 63/122 (51.64%), Postives = 86/122 (70.49%), Query Frame = -3 Query: 270 WCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 635 WC P +HFD++ P F++IAQ +A +VP+ +RR+PCAK GG++F V G+ +L NVGGAGD+ +VS KGSKT W MSR WGQNW +N L GQS+S ++T SDG T +V+P +W Sbjct: 129 WCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASW 250
BLAST of DN617925 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.332e-33 Identity = 61/126 (48.41%), Postives = 92/126 (73.02%), Query Frame = -3 Query: 270 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIK-GSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQLTA-SDGRTVTSNNVVPGNW 641 GGWCNPP HFD+++PAF+++A +RAGIVP+ +RR+PCA+ GG+RF + G+ Y+ L + NV GAGDV + +K G GW MS NWG ++Q+ + L GQ+LSF++T+ + G+T+ + V P +W Sbjct: 128 GGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASW 253
BLAST of DN617925 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.954e-28 Identity = 51/117 (43.59%), Postives = 84/117 (71.79%), Query Frame = -3 Query: 270 QHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQLTASDGRTVTSNNVVPGNW 617 +HFD+ PAFL IA+ + G+VP+S+R++ C ++GGI++T+ G+ +N+V++ NVGGAGDV +++KG+K W + R+WGQ W++ + L G+SL+F++ D R TS V P +W Sbjct: 162 EHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDW 278
BLAST of DN617925 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 3.954e-28 Identity = 61/134 (45.52%), Postives = 89/134 (66.42%), Query Frame = -3 Query: 270 LSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTG--WQAMSRNWGQNWQSNSYL-NGQSLSFQLT--ASDGRTVTSNNVVPGNW 656 L ND+GGWCNPP HFDMA P+FL++AQ AGIVP+ +RR+PC + GG+RF + G+ Y+ L+ + NVGGAGDV S+S+K S G W + NWG +Q + L N L+ +LT ++ +T+ ++ + W Sbjct: 138 LPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSDGLTVKLTTYSTPQQTIIVSDAISPWW 271
BLAST of DN617925 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 5.543e-14 Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = -3 Query: 270 GGWCNPPLQHFDMAEPAFLQIAQY-------RAGIVPISFRRIPCAKKGGIRFTVNGHS--YFNLVLITNVGGAGDVHSVSIKGSKTG--WQAMSRNWGQNWQSNSYLN---GQSLSFQLTASDGRTVTSNNVVPGNW 641 GG C HFDM+ AF +A AG++ I ++R+PC + F V+ S Y+ +L+ G GD+ +V I ++ G W+AM ++WG W+ NS S +LT+ G+ + +NNV+P W Sbjct: 124 GGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWRLNSNTGKPLSPPFSIRLTSGSGKVLVANNVIPSGW 261 The following BLAST results are available for this feature:
BLAST of DN617925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617925 ID=DN617925; Name=DN617925; organism=Citrus sinensis; type=EST; length=658bpback to top |