DN617920
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617920 vs. ExPASy Swiss-Prot
Match: U2AF2_MOUSE (Splicing factor U2AF 65 kDa subunit OS=Mus musculus GN=U2af2 PE=1 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 7.523e-17 Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = -2 Query: 218 PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQGDY 523 P++V+CL +V +EL DDEEYEEI+ED+R E K+G + ++ IPRP +G PG GK+F+E+ + KA G+ GRKF VV + + + + D+ Sbjct: 374 PTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 474
BLAST of DN617920 vs. ExPASy Swiss-Prot
Match: U2AF2_HUMAN (Splicing factor U2AF 65 kDa subunit OS=Homo sapiens GN=U2AF2 PE=1 SV=4) HSP 1 Score: 86.6557 bits (213), Expect = 7.523e-17 Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = -2 Query: 218 PSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQGDY 523 P++V+CL +V +EL DDEEYEEI+ED+R E K+G + ++ IPRP +G PG GK+F+E+ + KA G+ GRKF VV + + + + D+ Sbjct: 374 PTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP-VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 474
BLAST of DN617920 vs. ExPASy Swiss-Prot
Match: UHMK1_PONAB (Serine/threonine-protein kinase Kist OS=Pongo abelii GN=UHMK1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.569e-14 Identity = 38/101 (37.62%), Postives = 67/101 (66.34%), Query Frame = -2 Query: 224 VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQG 526 +P+ V+ L V+ D L+++EEYE+++ED+++E K+G +V++++P+ N PG G+VF+EYA+ + A+ + GR F G VVA FYP + + +G Sbjct: 318 LPTPVLRLLNVLDDDYLENEEEYEDVVEDVKEECQKYGPVVSLLVPKEN------PGRGQVFVEYANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAYKRG 412
BLAST of DN617920 vs. ExPASy Swiss-Prot
Match: UHMK1_HUMAN (Serine/threonine-protein kinase Kist OS=Homo sapiens GN=UHMK1 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.569e-14 Identity = 38/101 (37.62%), Postives = 67/101 (66.34%), Query Frame = -2 Query: 224 VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQG 526 +P+ V+ L V+ D L+++EEYE+++ED+++E K+G +V++++P+ N PG G+VF+EYA+ + A+ + GR F G VVA FYP + + +G Sbjct: 318 LPTPVLRLLNVLDDDYLENEEEYEDVVEDVKEECQKYGPVVSLLVPKEN------PGRGQVFVEYANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAYKRG 412
BLAST of DN617920 vs. ExPASy Swiss-Prot
Match: UHMK1_RAT (Serine/threonine-protein kinase Kist OS=Rattus norvegicus GN=Uhmk1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.495e-14 Identity = 37/101 (36.63%), Postives = 67/101 (66.34%), Query Frame = -2 Query: 224 VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQG 526 +P+ V+ L V+ D L++++EYE+++ED+++E K+G +V++++P+ N PG G+VF+EYA+ + A+ + GR F G VVA FYP + + +G Sbjct: 318 LPTPVLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPKEN------PGRGQVFVEYANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAYKRG 412
BLAST of DN617920 vs. ExPASy Swiss-Prot
Match: UHMK1_MOUSE (Serine/threonine-protein kinase Kist OS=Mus musculus GN=Uhmk1 PE=1 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 3.495e-14 Identity = 37/101 (36.63%), Postives = 67/101 (66.34%), Query Frame = -2 Query: 224 VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPENKFAQG 526 +P+ V+ L V+ D L++++EYE+++ED+++E K+G +V++++P+ N PG G+VF+EYA+ + A+ + GR F G VVA FYP + + +G Sbjct: 318 LPTPVLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPKEN------PGRGQVFVEYANAGDSKAAQKLLTGRMFDGKFVVATFYPLSAYKRG 412
BLAST of DN617920 vs. ExPASy Swiss-Prot
Match: U2AF2_SCHPO (Splicing factor U2AF 59 kDa subunit OS=Schizosaccharomyces pombe GN=prp2 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.272e-12 Identity = 34/96 (35.42%), Postives = 55/96 (57.29%), Query Frame = -2 Query: 239 VPSKVVCLTQVVSADELKDDEEYEEILEDMRQEGGKFGTLVNVIIPRPNPNGEPSPGVGKVFLEYADIDGATKARTGMNGRKFGGNQVVAVFYPEN 526 +P++V+ L +++ DE+ D +EYE+I E ++ + +G L+++ IPR G GKVF+ Y+DI A A M G KF +V FY E+ Sbjct: 415 IPTRVLQLHNLITGDEIMDVQEYEDIYESVKTQFSNYGPLIDIKIPRSIGTRNSGLGTGKVFVRYSDIRSAEVAMEEMKGCKFNDRTIVIAFYGED 510 The following BLAST results are available for this feature:
BLAST of DN617920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617920 ID=DN617920; Name=DN617920; organism=Citrus sinensis; type=EST; length=527bpback to top |