DN617919

Overview
NameDN617919
Unique NameDN617919
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: CP17A_RAT (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rattus norvegicus GN=Cyp17a1 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.488e-26
Identity = 68/160 (42.50%), Postives = 94/160 (58.75%), Query Frame = -3
Query:  238 LEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIP-LISRKAVEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFKVT 714
            L+W LA L+++P V ++ Q+E+DQ VG +R    +D  HL  ++A I+E LRI P  P LI  KA  D  IG + +PKDT + VNLW++  D   W  P +F PERFL  + S +      Y  LPFG G R C G +LA QEL    A ++Q F+  V+
Sbjct:  310 LKWILAFLVHNPEVKKKIQKEIDQYVGFSRTPTFNDRSHLLMLEATIREVLRIRPVAPMLIPHKANVDSSIGEFTVPKDTHVVVNLWALHHDENEWDQPDQFMPERFLDPTGSHLITPTQSY--LPFGAGPRSCIGEALARQELFVFTALLLQRFDLDVS 467          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: C77A3_SOYBN (Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.488e-26
Identity = 66/171 (38.60%), Postives = 99/171 (57.89%), Query Frame = -3
Query:  211 SLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLISRKAV-EDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGL-HYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFKVTSPDGVVDMT 717
            ++EW +A+LI +P V  +  +E+ + VG  + V E DV  +PY+ A++KE LR HPP   +   AV E   +G Y IP D  + V   ++  DPK W NP +F PERF+S    E D+ G+   + +PFG GRR CPGL++A   +   +A M+Q F +    P+  +D T
Sbjct:  318 AVEWGIAQLIANPNVQTKLYEEIKRTVGEKK-VDEKDVEKMPYLHAVVKELLRKHPPTHFVLTHAVTEPTTLGGYDIPIDANVEVYTPAIAEDPKNWLNPEKFDPERFIS-GGEEADITGVTGVKMMPFGVGRRICPGLAMATVHIHLMMARMVQEFEWGAYPPEKKMDFT 486          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: CP1A1_RAT (Cytochrome P450 1A1 OS=Rattus norvegicus GN=Cyp1a1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.943e-26
Identity = 68/181 (37.57%), Postives = 104/181 (57.46%), Query Frame = -3
Query:  178 SLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPL-ISRKAVEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFKVTSPDGVVDMTERPGLASPRAQ 717
            ++ WSL  L+ +P + ++ Q+ELD V+GR+R  + SD P LPY++A I E+ R    +P  I    + D  +  + IPK   +FVN W +  D ++W +P EF+PERFL+ S + +D K L  + + FG G+R C G ++   E+   LA ++Q   F V SP   VDMT   GL    A+
Sbjct:  329 AISWSLMYLVTNPRIQRKIQEELDTVIGRDRQPRLSDRPQLPYLEAFILETFRHSSFVPFTIPHSTIRDTSLNGFYIPKGHCVFVNQWQVNHDQELWGDPNEFRPERFLTSSGT-LD-KHLSEKVILFGLGKRKCIGETIGRLEVFLFLAILLQQMEFNV-SPGEKVDMTPAYGLTLKHAR 506          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.943e-26
Identity = 64/194 (32.99%), Postives = 106/194 (54.64%), Query Frame = -3
Query:  160 EWSLAELINHPMVLQEAQQELDQVV-GRNRLVQESDVPHLPYIQAIIKESLRIHPPIPLI-SRKAVEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSE----IDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFKVTSPDGV----VDMTERPGLASPRAQDLVCVP 711
            EW ++EL+  P  + +AQ E+   + G++    E  +  L Y + ++KE LR+HP +PL+  R   E C +G + + K T + VN W++ R P+ W +P EF+PERF     S     +D +G  ++++PFG+GRR CPG +  +  L   +A ++  F++ +  PDG+    +DM    G    R   L  VP
Sbjct:  316 EWIMSELMRKPEAMAKAQAEVRGALDGKSPEDHEGQMDKLSYTRMVVKEGLRLHPVLPLLLPRSCQETCDVGGFEVTKGTKVIVNAWALARSPERWHDPEEFRPERFADDDGSSAAVAVDYRGSQFEYIPFGSGRRMCPGNTFGLAALELMVARLLYYFDWSL--PDGMRPEELDMDTVVGSTMRRRNHLHLVP 507          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: C89A2_ARATH (Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.943e-26
Identity = 63/174 (36.21%), Postives = 103/174 (59.20%), Query Frame = -3
Query:  205 SLEWSLAELINHPMVLQEAQQELDQVVGRN-RLVQESDVPHLPYIQAIIKESLRIHPPIP-LISRKAVEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLH-YQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFKVTSPDGVVDMTER 717
            +L+W +A L+ +P + +   +E+  VVG   + V+E DV  +PY++A++ E LR HPP   L+     ED  +G Y +PK+  +   +  +GRDP  W+ P+ F+PERF+ +  + +D+ G    + +PFG GRR CPG+ LAM  L   +A M++ F +K       VD+TE+
Sbjct:  314 ALQWIMANLVKYPEIQERLHEEIKSVVGEEAKEVEEEDVEKMPYLKAVVLEGLRRHPPGHFLLPHSVTEDTVLGGYKVPKNGTINFMVAEIGRDPVEWEEPMAFKPERFMGEEEA-VDLTGSRGIKMMPFGAGRRICPGIGLAMLHLEYYVANMVREFQWKEVQ-GHEVDLTEK 485          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: CP1A2_CALJA (Cytochrome P450 1A2 OS=Callithrix jacchus GN=CYP1A2 PE=2 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 3.314e-26
Identity = 67/182 (36.81%), Postives = 102/182 (56.04%), Query Frame = -3
Query:  178 SLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPL-ISRKAVEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFKVTSPDGV-VDMTERPGLASPRAQ 717
            ++ WSL  L+  P + ++ Q+ELD V+GR R  + SD P LPY++A I E+ R    +P  I      D  +  + IPK+  +F+N W +  DP++W +P EF+PERFL+   + ++ K L  + L FG G+R C G  L   E+   LA ++Q   F V  P GV +D+T   GL    A+
Sbjct:  325 AISWSLMYLVTKPEIQRKIQKELDTVIGRGRRPRLSDRPQLPYLEAFILETFRHSSFVPFTIPHSTTRDTTLKGFYIPKECCVFINQWQVNHDPQLWGDPSEFRPERFLTAKGTALN-KPLSEKILLFGLGKRRCIGEVLGKWEVFLFLAILLQQLEFSV--PPGVQIDLTPTYGLTMKHAR 503          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: CP1A1_PLEPL (Cytochrome P450 1A1 OS=Pleuronectes platessa GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.314e-26
Identity = 66/175 (37.71%), Postives = 100/175 (57.14%), Query Frame = -3
Query:  196 SLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPL-ISRKAVEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFKVTSPDGVVDMTERPGL 717
            +L WS+  L+ HP + +   QE++  VG +R+   SD P+LP+++A I E LR    +P  I     +D  +  Y IPKDT +F+N W +  DP++WK+P  F P+RFLS   SE++ K    + + FG G+R C G  +A  E+   LA +IQ  +F +  P   +DMT   GL
Sbjct:  330 ALSWSVMYLVAHPEIQERLYQEIEDKVGLDRMPLLSDKPNLPFLEAFILEILRHSSFLPFTIPHCTTKDTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLSADGSEVN-KLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAIIIQKLHF-LPIPGEKLDMTPEYGL 502          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: CP1A1_PLAFE (Cytochrome P450 1A1 OS=Platichthys flesus GN=cyp1a1 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.314e-26
Identity = 66/175 (37.71%), Postives = 100/175 (57.14%), Query Frame = -3
Query:  196 SLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPL-ISRKAVEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFKVTSPDGVVDMTERPGL 717
            +L WS+  L+ HP + +   QE++  VG +R+   SD P+LP+++A I E LR    +P  I     +D  +  Y IPKDT +F+N W +  DP++WK+P  F P+RFLS   SE++ K    + + FG G+R C G  +A  E+   LA +IQ  +F +  P   +DMT   GL
Sbjct:  330 ALSWSVMYLVAHPEIQERLYQEIEDKVGLDRMPLLSDKPNLPFLEAFILEILRHSSFLPFTIPHCTTKDTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLSADGSEVN-KLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAIIIQKLHF-LPIPGEKLDMTPEYGL 502          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: CP1A1_LIMLI (Cytochrome P450 1A1 OS=Limanda limanda GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.314e-26
Identity = 66/175 (37.71%), Postives = 100/175 (57.14%), Query Frame = -3
Query:  196 SLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPL-ISRKAVEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFKVTSPDGVVDMTERPGL 717
            +L WS+  L+ HP + +   QE++  VG +R+   SD P+LP+++A I E LR    +P  I     +D  +  Y IPKDT +F+N W +  DP++WK+P  F P+RFLS   SE++ K    + + FG G+R C G  +A  E+   LA +IQ  +F +  P   +DMT   GL
Sbjct:  330 ALSWSVMYLVAHPEIQERLYQEIEDKVGLDRMPLLSDKPNLPFLEAFILEILRHSSFLPFTIPHCTTKDTSLNGYFIPKDTCVFINQWQINHDPEMWKDPSSFNPDRFLSADGSEVN-KLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAILIQKLHF-LPIPGEKLDMTPEYGL 502          
BLAST of DN617919 vs. ExPASy Swiss-Prot
Match: CP1A2_PONAB (Cytochrome P450 1A2 OS=Pongo abelii GN=CYP1A2 PE=2 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 4.328e-26
Identity = 69/182 (37.91%), Postives = 103/182 (56.59%), Query Frame = -3
Query:  178 SLEWSLAELINHPMVLQEAQQELDQVVGRNRLVQESDVPHLPYIQAIIKESLRIHPPIPL-ISRKAVEDCKIGNYVIPKDTVLFVNLWSMGRDPKIWKNPLEFQPERFLSQSNSEIDVKGLHYQFLPFGTGRRGCPGLSLAMQELPATLAAMIQCFNFKVTSPDGV-VDMTERPGLASPRAQ 717
            ++ WSL  L+  P + ++ Q+ELD ++GR R  + SD P LPY++A I E+ R    +P  I      D  +  + IPK+  +FVN W +  DP++W++P EF PERFL+   + I+ K L  + + FG G+R C G  LA  E+   LA ++Q   F V  P GV VD+T   GL    A+
Sbjct:  325 AISWSLMYLVTKPEIQRKIQKELDTMIGRGRRPRLSDRPQLPYLKAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKECCVFVNQWQVNHDPELWEDPSEFWPERFLTTDGTAIN-KPLSEKVMLFGMGKRRCIGEVLANWEVFLFLAILLQQLEFSV--PPGVKVDLTPIYGLTMKHAR 503          
The following BLAST results are available for this feature:
BLAST of DN617919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP17A_RAT1.488e-2642.50Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rattus... [more]
C77A3_SOYBN1.488e-2638.60Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=... [more]
CP1A1_RAT1.943e-2637.57Cytochrome P450 1A1 OS=Rattus norvegicus GN=Cyp1a1... [more]
C99A1_SORBI1.943e-2632.99Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C89A2_ARATH1.943e-2636.21Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CY... [more]
CP1A2_CALJA3.314e-2636.81Cytochrome P450 1A2 OS=Callithrix jacchus GN=CYP1A... [more]
CP1A1_PLEPL3.314e-2637.71Cytochrome P450 1A1 OS=Pleuronectes platessa GN=cy... [more]
CP1A1_PLAFE3.314e-2637.71Cytochrome P450 1A1 OS=Platichthys flesus GN=cyp1a... [more]
CP1A1_LIMLI3.314e-2637.71Cytochrome P450 1A1 OS=Limanda limanda GN=cyp1a1 P... [more]
CP1A2_PONAB4.328e-2637.91Cytochrome P450 1A2 OS=Pongo abelii GN=CYP1A2 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01N20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617919 ID=DN617919; Name=DN617919; organism=Citrus sinensis; type=EST; length=719bp
TTTTTTTTAATAAAAATGTAATTTTTATTATATTAACCGGTTAAAAACCG
GTTGTACCGGTTGCATGCCAACGCTGTATGAGATACACGCTGCATGGTAG
GTTGACTGTTAATTTCAACGTACATCCTAATTTAGGATACTAGGAGCACA
ACGTGCAACTGGTACACACACAAGATCCTGTGCTCTTGGAGATGCTAATC
CTGGGCGTTCAGTCATATCAACCACACCATCCGGACTCGTTACTTTGAAA
TTGAAGCACTGAATCATAGCTGCTAGAGTTGCTGGCAACTCTTGCATGGC
TAAAGAAAGGCCAGGGCAGCCTCTTCTCCCAGTTCCAAATGGCAGGAATT
GGTAATGCAATCCCTTAACGTCAATCTCACTATTTGACTGTGATAAGAAC
CGTTCTGGCTGAAATTCCAATGGGTTCTTCCAAATTTTGGGGTCCCTACC
CATGGACCAAAGGTTCACAAACAACACAGTGTCTTTAGGAATTACGTAGT
TGCCAATTTTACAGTCTTCTACTGCTTTCCTGCTAATCAATGGAATTGGT
GGATGAATCCGCAATGATTCTTTAATGATGGCTTGAATATAGGGGAGATG
AGGAACGTCAGATTCTTGAACAAGCCTGTTTCTTCCCACAACTTGATCAA
GCTCTTGCTGTGCTTCCTGAAGCACCATTGGATGGTTTATGAGCTCTGCC
AATGACCATTCCAATGACG
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